FFCP PHASE1:Hg19::chr20:634000..634048,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16132 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BYN0 | |||
|association_with_transcript=0bp_to_ENST00000381962_5end | |||
|cluster_id=chr20:634000..634048,- | |||
|description=CAGE_peak_2_at_SRXN1_5end | |||
|id=chr20:634000..634048,- | |||
|ontology_enrichment_celltype=CL:0002057!1.61e-08!42;CL:0000860!2.01e-08!45;CL:0002194!1.48e-07!63;CL:0000576!1.48e-07!63;CL:0000040!1.48e-07!63;CL:0000559!1.48e-07!63;CL:0000066!2.74e-07!254;CL:0000839!7.51e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.82e-17;33!CL:0002057;4.82e-17;33!CL:0000473;1.43e-12;39!CL:0000234;1.43e-12;39!CL:0000576;1.98e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.24e-11,42;CL:0002057,3.24e-11,42;CL:0002194,3.18e-10,59;CL:0000576,3.18e-10,59;CL:0000040,3.18e-10,59;CL:0000559,3.18e-10,59;CL:0000473,3.92e-10,48;CL:0000234,3.92e-10,48;CL:0000839,1.42e-09,66;CL:0002009,2.27e-09,61;CL:0000557,8.33e-08,67;CL:0000766,5.82e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!8.88e-08!22;UBERON:0001869!4.67e-07!32;UBERON:0001950!5.48e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.76e-08;22!UBERON:0001950;2.31e-07;20!UBERON:0001869;9.72e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.36e-09,22;UBERON:0001950,2.08e-08,20;UBERON:0001869,2.56e-08,32;UBERON:0003528,2.12e-07,34;UBERON:0002020,2.12e-07,34;UBERON:0000956,2.74e-07,25;UBERON:0000203,2.74e-07,25;UBERON:0001893,2.85e-07,34;UBERON:0002791,3.11e-07,32 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.986680828671798,2.00146596706261,0,1.74467704820074,2.53299878168311,2.52687949370732,0.261185628199839,0.737201809504527,3.48900583986214,0.218441372130172,1.84636884759917,0.247532705920093,0.331397375727916,2.01697543935533,0,0.730310090387373,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0,0.547497700291537,0.502170558379211,0.305653622991805,0.738905305049512,0.472264687882075,0,0,0.619264493264304,1.83884244895785,3.31326510656075,2.21852406100073,0,0,0.293600439334847,0,0,0.217010870715852,3.58264758783879,0.32389366601898,1.80302897343931,4.9435401185052,10.2026504795979,3.88134497900506,4.88100977501938,9.04569353648017,9.91060386864331,4.60307827715441,5.12321413058201,5.43909128743746,1.03423704220986,3.22742341791913,4.06279459783025,6.40023954444856,8.46009065179322,7.41587498668779,2.14258724659632,5.1348644332175,1.27867425159808,4.28806690242731,5.58498241340569,4.26224750532694,8.9964863974861,7.37600792098482,8.09668923694247,9.54744927975624,4.69334626578181,6.73285418585862,5.44859552370032,9.20694089968912,5.37986058649504,0.211255286311942,0.425208599930087,0.209658645508376,1.01095768031846,0.600707571366025,0.16072558669708,1.14005097496499,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0.411202997999018,0.334372990781356,0,0,0,0.668462741311041,0.294605907474837,0.221533894583621,0.812411591295047,1.40900451698243,0.650296737799391,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,1.13309342697566,0,1.03088233644789,0.253019692019503,0.95569624297229,0,0,0.602300476311091,0.511946444617674,0,0,1.64225599384209,0.201606743224732,0.534880391567015,1.15859523106239,0,0.670700859703636,1.79007586580942,3.2529523714611,2.00535164254356,1.01392563272577,0,0.486634870302636,0.472674085820339,0.443458794925128,0.87834785693126,0.72038491523742,3.27865759463288,2.22470665670658,6.81549526674835,8.18409765306556,5.58423434179234,0,0,0,1.59009925893364,0.860234595106124,0.694281003215189,1.69592382577203,3.35599548967925,2.20094433552054,3.34391946458897,0.775250277507987,0.35576626268671,1.33888245105868,1.20848795132744,0,0.976248230192678,1.83831540172934,4.0507097394088,0.803697554556718,0.44905874525234,0.900891843866578,0,0.949265659568129,3.84723662253855,5.27121669744253,0,2.61656431285521,1.49091585508596,1.77282716330412,0.529636723252875,0.573673241497627,1.06400514659507,0.560677600142307,0,1.72667283892012,0.311211035399766,1.0776853765575,0.817309515567294,0.302714855289863,0.576175924479999,0.468642863667593,1.24864030732128,0,2.98897361103602,2.46612447151906,0.971237666208789,1.96631129383148,0.408308342509787,0.61417158655884,1.03325781175765,0,0.741800787835671,0,0.718618141816238,0.505008341862199,0.750711119231785,1.38532057742091,0.438977620880838,0.30648779579902,1.05166641234618,1.92834711372036,0.717558542755448,0.213557388818567,1.27159140695737,0.600182192168805,0.515262646192195,0,0.558350568994769,0.675105328965065,0.584622030967192,0.252433774244115,0.552299391853796,0.484938170456436,0,1.10827308050404,1.52604533079439,1.15956511897978,0.818238361772504,2.29443676311203,0.853815942907168,0.795178609928912,0.580969714347592,0.414644220061482,1.00928340350251,0.36497735907583,0,1.92972281457866,2.76269842704961,0,0,1.30137480043828,2.02301628093722,0.964044119533928,1.21323370005633,0.871517776369625,1.18635309555548,1.48314438976181,0.588664395376038,1.92373578473195,0.738155454624648,0,0.8231480226628,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0.737930631258681,1.3725424823882,1.97550513735526,3.37205259772859,3.9206299240536,1.574003567695,1.3032332212413,3.11980435583874,4.3299402607582,0.115930404975077,1.40890433082986,1.01056513432752,0.925971025153221,0.380508304469197,0,0.858486162094873,0.738651018262192,3.97807250736704,1.33768046059855,0.93733833986777,0.16798212819886,0.567100388969546,1.43293636324557,4.65014301622339,1.15014803749563,2.46331618947972,0.704387472105808,0,0,0.12624243342638,0.507983154337352,1.52795370223311,0,0,1.23392991243988,0.901029173531752,0.285826432630578,1.23344192779897,0.43596006883328,1.1734125731352,0.517086863031111,0,1.690605505112,1.06375246633948,0,0.514414748524284,2.83698264046557,1.3321108950805,0.714889968290738,0,1.64648067356154,2.60588947434988,0.710783897485092,3.16780749173372,2.41151501647669,0,3.09916272664377,1.2162378064119,0,0,2.87549826589899,1.14861935834114,1.42636905040718,1.73737568001095,0.821905290201534,1.43248770591916,3.02629888782524,0.591092280605782,0.215627574859517,0.513372145118994,0.508189248444927,0,2.31986643833309,1.00509759200609,0,0.749007023947182,0,0.828831026872071,0.981531933753119,0.500170521059677,1.08506009479894,0.623912584592421,0.178428988797162,0.946214490203608,0.35142424497814,0.902838299183157,0,2.0694614258501,0.664225598535437,2.02806085395873,1.30325421702124,1.17480694477644,0.343143423810856,0.206768026122887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| |||
|short_description=p2@SRXN1 | |||
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Latest revision as of 15:45, 17 September 2015
Short description: | p2@SRXN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SRXN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000381962_5end |
EntrezGene: | SRXN1 |
HGNC: | 16132 |
UniProt: | Q9BYN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.24e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.24e-11 | 42 |
monopoietic cell | 3.18e-10 | 59 |
monocyte | 3.18e-10 | 59 |
monoblast | 3.18e-10 | 59 |
promonocyte | 3.18e-10 | 59 |
defensive cell | 3.92e-10 | 48 |
phagocyte | 3.92e-10 | 48 |
myeloid lineage restricted progenitor cell | 1.42e-09 | 66 |
macrophage dendritic cell progenitor | 2.27e-09 | 61 |
granulocyte monocyte progenitor cell | 8.33e-08 | 67 |
myeloid leukocyte | 5.82e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.36e-09 | 22 |
neocortex | 2.08e-08 | 20 |
cerebral hemisphere | 2.56e-08 | 32 |
brain grey matter | 2.12e-07 | 34 |
gray matter | 2.12e-07 | 34 |
cerebral cortex | 2.74e-07 | 25 |
pallium | 2.74e-07 | 25 |
telencephalon | 2.85e-07 | 34 |
regional part of telencephalon | 3.11e-07 | 32 |