FFCP PHASE1:Hg19::chr20:62708584..62708618,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10287 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13735 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-343bp_to_AB590132,DQ891204,DQ894387_5end | |||
|cluster_id=chr20:62708584..62708618,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_RGS19_5end | |||
|id=chr20:62708584..62708618,- | |||
|ontology_enrichment_celltype=CL:0000763!8.01e-63!112;CL:0000049!8.01e-63!112;CL:0000037!4.44e-62!172;CL:0000566!4.44e-62!172;CL:0000766!2.20e-61!76;CL:0002032!2.80e-60!165;CL:0000837!2.80e-60!165;CL:0000988!1.06e-56!182;CL:0000738!8.97e-56!140;CL:0000557!5.01e-54!71;CL:0002009!8.25e-52!65;CL:0000839!2.45e-51!70;CL:0002194!3.43e-50!63;CL:0000576!3.43e-50!63;CL:0000040!3.43e-50!63;CL:0000559!3.43e-50!63;CL:0002031!3.01e-46!124;CL:0002087!9.59e-46!119;CL:0002057!2.81e-44!42;CL:0000860!2.91e-40!45;CL:0000134!3.71e-13!358;CL:0002320!2.41e-12!365;CL:0000219!1.47e-09!390;CL:0000094!9.59e-09!8;CL:0002393!2.04e-07!9;CL:0002397!2.04e-07!9;CL:0000840!2.25e-07!5;CL:0001029!2.25e-07!5;CL:0000048!9.25e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.19e-56;33!CL:0002057;3.19e-56;33!CL:0000473;1.70e-50;39!CL:0000234;1.70e-50;39!CL:0000576;1.83e-47;48!CL:0000766;1.54e-38;69!CL:0000763;7.57e-24;100!CL:0000738;9.64e-17;136!CL:0000094;5.10e-15;8!CL:0002087;3.65e-13;104!CL:0000988;3.37e-12;177!CL:0000081;1.41e-10;11!CL:0000775;4.01e-09;3!CL:0000219;8.15e-08;193!CL:0000097;2.64e-07;5!CL:0000875;5.39e-07;3!CL:0002396;5.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.22e-99,72;CL:0000839,9.48e-82,66;CL:0000557,2.49e-80,67;CL:0002194,2.38e-78,59;CL:0000576,2.38e-78,59;CL:0000040,2.38e-78,59;CL:0000559,2.38e-78,59;CL:0000763,3.36e-76,108;CL:0000049,3.36e-76,108;CL:0002009,2.25e-75,61;CL:0000473,1.33e-67,48;CL:0000234,1.33e-67,48;CL:0000738,8.93e-64,136;CL:0000860,4.71e-63,42;CL:0002057,4.71e-63,42;CL:0002032,7.62e-61,161;CL:0000837,7.62e-61,161;CL:0000037,1.92e-59,168;CL:0000988,1.61e-55,177;CL:0002031,1.14e-54,120;CL:0002087,3.67e-51,115;CL:0000134,8.13e-19,354;CL:0002320,4.17e-18,361;CL:0000219,1.30e-15,386;CL:0000094,4.51e-15,8;CL:0000048,1.41e-12,427;CL:0000723,3.68e-12,433;CL:0000034,1.27e-11,441;CL:0000081,1.30e-10,11;CL:0000775,3.97e-09,3;CL:0000097,2.45e-07,5;CL:0002028,2.45e-07,5;CL:0000875,4.47e-07,3;CL:0002396,4.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-45;42!CL:0000049;1.47e-20;108 | |||
|ontology_enrichment_disease=DOID:2531!7.08e-11!51;DOID:0060083!7.08e-11!51;DOID:8692!3.96e-10!31;DOID:1240!1.15e-09!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.12e-62!102;UBERON:0003061!6.12e-62!102;UBERON:0002193!4.57e-57!112;UBERON:0002371!4.14e-47!80;UBERON:0001474!2.79e-42!86;UBERON:0002405!9.78e-35!115;UBERON:0004765!8.91e-33!101;UBERON:0001434!8.91e-33!101;UBERON:0003081!1.79e-19!216;UBERON:0002204!3.26e-13!167;UBERON:0000178!9.88e-12!15;UBERON:0000179!9.88e-12!15;UBERON:0000463!9.88e-12!15;UBERON:0002384!1.15e-11!375;UBERON:0007023!1.19e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.04e-15;15!UBERON:0000179;1.04e-15;15!UBERON:0000463;1.04e-15;15!UBERON:0002390;4.00e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.26e-87,98;UBERON:0003061,9.26e-87,98;UBERON:0002193,3.15e-77,108;UBERON:0002371,3.21e-69,76;UBERON:0001474,3.72e-63,82;UBERON:0002405,2.76e-61,93;UBERON:0004765,2.56e-56,90;UBERON:0001434,2.67e-49,100;UBERON:0003081,2.42e-33,203;UBERON:0002204,5.74e-24,167;UBERON:0002384,3.86e-17,371;UBERON:0000178,1.02e-15,15;UBERON:0000179,1.02e-15,15;UBERON:0000463,1.02e-15,15;UBERON:0000926,1.15e-15,315;UBERON:0004120,1.15e-15,315;UBERON:0006603,1.15e-15,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,3.03772180964799,4.32909297225236,1.96682138424452,0,1.39334510984468,0,0,0,0.232401601740905,0,0,0,0.401088894940283,0.217010870715852,2.68698569087909,0.971680998056939,3.60605794687861,4.79814187972564,4.53451132426571,3.39617685662943,7.43772918098191,2.05583944010913,4.95530193432166,5.75384784644301,4.09857130446561,4.7296445977717,0.689491361473237,1.93645405075148,1.35426486594342,7.71793592124679,3.82068610080984,4.04502272001152,4.89734227793444,2.88836124368484,0.639337125799041,5.27762080298746,4.9865914405408,4.26224750532694,5.5139755339431,5.6738522469114,4.9825779919646,1.50749199154046,3.65038042894141,2.17188844705117,1.81619850790011,1.10483290796269,2.53169909952708,1.05627643155971,0.850417199860174,1.46761051855863,2.47122988522289,2.4028302854641,2.08943262706204,1.99508920618874,2.58591680358817,1.27864907635244,0,0,0,0,0.800791974072025,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.445641827540694,0,0,0,0.25618263945135,0.650296737799391,0.657751618414705,0,0.289803085735052,0,0,0,0.906474741580529,0,0,0,0.318565414324097,0,0,0,0.383959833463255,2.49861453104692,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,4.86821090482025,3.65672448328461,4.38761269712255,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1314542666882,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,2.10603838625314,4.16167254408439,0,0,0,0,0,0,0,1.76096868026452,2.07328115540772,2.88239906833923,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51128545716063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9761685747324,23.932916736322,15.7477895105693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.72571360654893,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,8.62660935694688,10.7049208999933,10.8232965563091,5.47933083552915,6.17043409629291,12.9694662238543,9.18053443304795,9.51750211553125,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,1.69338866179106,0,0.280797178113459,0.228234679033192,4.38703708164465,0,0.338583555603207,1.2847046008296,0.80719882876419,0.851692475380653,0.343505344755765,3.6868891717015,4.69719826574073,2.83643540910244,2.9308214310306,0,0,0.811367035427949,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0.494411622680279,0,0.398495976502139,0.552567831062295,0,0,0.861593638227486,0,0,0,2.55786185113436,0,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0.470940769185074,1.32969345520125,0,0,0,0,0.635746315921515,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.533937062838473,0,1.65695622138878,0.496166021811951,0,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,3.84090226898907,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,2.18944576355981,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0.939839179798536,0.45120521581504,2.29864658627337,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0.213233981900981,0,2.38978966393223,1.48979314310059,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,5.77023286145819 | |||
|short_description=p5@RGS19 | |||
}} |
Latest revision as of 15:21, 17 September 2015
Short description: | p5@RGS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RGS19_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -343bp_to_AB590132, DQ891204, DQ894387_5end |
EntrezGene: | RGS19 |
HGNC: | 13735 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.26e-87 | 98 |
blood island | 9.26e-87 | 98 |
hemolymphoid system | 3.15e-77 | 108 |
bone marrow | 3.21e-69 | 76 |
bone element | 3.72e-63 | 82 |
immune system | 2.76e-61 | 93 |
skeletal element | 2.56e-56 | 90 |
skeletal system | 2.67e-49 | 100 |
lateral plate mesoderm | 2.42e-33 | 203 |
musculoskeletal system | 5.74e-24 | 167 |
connective tissue | 3.86e-17 | 371 |
blood | 1.02e-15 | 15 |
haemolymphatic fluid | 1.02e-15 | 15 |
organism substance | 1.02e-15 | 15 |
mesoderm | 1.15e-15 | 315 |
mesoderm-derived structure | 1.15e-15 | 315 |
presumptive mesoderm | 1.15e-15 | 315 |