FFCP PHASE1:Hg19::chr20:50418012..50418032,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57167 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15924 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=92bp_to_ENST00000483130_5end | |||
|cluster_id=chr20:50418012..50418032,- | |||
|description=CAGE_peak_7_at_SALL4_5end | |||
|id=chr20:50418012..50418032,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.65e-16;1!CL:0000557;1.65e-16;1!CL:0002563;3.87e-16;4!CL:0002593;6.42e-09;2!CL:0002253;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.59e-16,4;CL:0002253,5.94e-09,2;CL:0002593,8.09e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.99e-11!143;DOID:305!6.65e-11!106;DOID:162!3.32e-09!235;DOID:14566!1.02e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.33e-07!35;UBERON:0001046!5.22e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;1.65e-16;1!UBERON:0005352;1.65e-16;1!UBERON:0001242;3.87e-16;4!UBERON:0001262;3.87e-16;4!UBERON:0004786;3.87e-16;4!UBERON:0004808;3.87e-16;4!UBERON:0001277;3.87e-16;4!UBERON:0000485;1.24e-09;7!UBERON:0003929;1.24e-09;7!UBERON:0002456;6.42e-09;2!UBERON:0003350;1.53e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,1.93e-16,1;UBERON:0005352,1.93e-16,1;UBERON:0001242,3.59e-16,4;UBERON:0001262,3.59e-16,4;UBERON:0004786,3.59e-16,4;UBERON:0004808,3.59e-16,4;UBERON:0001277,3.59e-16,4;UBERON:0002456,8.09e-09,2;UBERON:0003350,1.47e-08,8;UBERON:0000485,1.05e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,1.06023814657188,0.348581828608555,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.102827492703324,0.600686115687835,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0.962479855263359,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,2.12923118845163,0,0.614481528616916,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0,0,0.970884173996107,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,0.422250816255987,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,1.02314474045374,0,0,0,0,0,0,1.30213880542617,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27217764290547,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,1.18375320854817,0,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0,0,0,0.609414446062818,0,0,0.19351266257817,0.365446585430928,0.164230914106418,0,0,0,0,0,0.0633107959558787,0.586654148204409,0,0,0.599428828746391,0.288180834308212,0.458146384663663,2.05913997434357,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0.321506296930038,0.687697182986169,0,0,0,0,0,0,0.367182116944987,0.844802692155252,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.606596470166591,0.285465333544967,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0.327130788511688,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.76736622782191,0,0,0,0,0,0,0,0,4.17967248506643,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0.535701835878287,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0.840816489941367,0.913158720509496,0,0,0,0.632054446930906,0.23248285073625,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0.356760272332706,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.378499274505237,0,0.380095503034311,0.305966489225945,0,0.0918948995348449,0.250707539292375,0,0,0,0,0,0.476128862927481,0,0,0.224263725161227,0.25458863311266,1.81905470062397,0,0,0.0673520530145875,0,0,0.244209805832924,0,0,0.449126010532934,0,0.122241444182866,0,0,0,0 | |||
|short_description=p7@SALL4 | |||
}} |
Latest revision as of 23:54, 16 September 2015
Short description: | p7@SALL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SALL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENST00000483130_5end |
EntrezGene: | SALL4 |
HGNC: | 15924 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.59e-16 | 4 |
epithelial cell of large intestine | 5.94e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 1.93e-16 | 1 |
spermatic cord | 1.93e-16 | 1 |
intestinal mucosa | 3.59e-16 | 4 |
wall of intestine | 3.59e-16 | 4 |
gastrointestinal system mucosa | 3.59e-16 | 4 |
gastrointestinal system epithelium | 3.59e-16 | 4 |
intestinal epithelium | 3.59e-16 | 4 |
internal thoracic artery | 8.09e-09 | 2 |
epithelium of mucosa | 1.47e-08 | 8 |
simple columnar epithelium | 1.05e-07 | 9 |