FFCP PHASE1:Hg19::chr20:48807456..48807475,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1834 | |||
|TSSclassifier=strong | |||
|UniProt=P17676 | |||
|association_with_transcript=80bp_to_ENST00000303004,uc002xvh.2,uc002xvi.1_5end | |||
|cluster_id=chr20:48807456..48807475,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_CEBPB_5end | |||
|id=chr20:48807456..48807475,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.97e-29!76;CL:0002057!1.82e-27!42;CL:0000860!2.38e-27!45;CL:0002194!1.06e-26!63;CL:0000576!1.06e-26!63;CL:0000040!1.06e-26!63;CL:0000559!1.06e-26!63;CL:0002009!1.09e-24!65;CL:0000557!2.07e-22!71;CL:0000839!3.69e-22!70;CL:0000763!5.86e-09!112;CL:0000049!5.86e-09!112;CL:0002320!8.08e-08!365;CL:0002393!2.15e-07!9;CL:0002397!2.15e-07!9;CL:0000063!2.64e-07!578;CL:0000134!3.38e-07!358;CL:0000094!8.20e-07!8;CL:0000081!9.18e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.79e-23;33!CL:0002057;4.79e-23;33!CL:0000473;3.08e-22;39!CL:0000234;3.08e-22;39!CL:0000576;3.49e-19;48!CL:0000766;1.60e-15;69!CL:0000094;8.11e-08;8!CL:0000136;1.17e-07;13!CL:0000081;1.43e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.77e-35,48;CL:0000234,1.77e-35,48;CL:0000766,2.78e-34,72;CL:0002194,2.81e-32,59;CL:0000576,2.81e-32,59;CL:0000040,2.81e-32,59;CL:0000559,2.81e-32,59;CL:0000860,4.14e-32,42;CL:0002057,4.14e-32,42;CL:0002009,3.13e-30,61;CL:0000839,2.41e-26,66;CL:0000557,2.62e-26,67;CL:0000763,4.81e-13,108;CL:0000049,4.81e-13,108;CL:0002320,3.28e-09,361;CL:0000134,1.56e-08,354;CL:0002393,1.95e-08,9;CL:0002397,1.95e-08,9;CL:0000738,2.32e-08,136;CL:0002087,6.11e-08,115;CL:0000094,9.37e-08,8;CL:0000081,1.07e-07,11;CL:0000136,6.85e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.27e-19!80;UBERON:0002390!2.69e-18!102;UBERON:0003061!2.69e-18!102;UBERON:0001474!7.18e-18!86;UBERON:0002405!3.33e-17!115;UBERON:0002193!2.82e-16!112;UBERON:0004765!8.20e-16!101;UBERON:0001434!8.20e-16!101;UBERON:0000926!8.76e-13!448;UBERON:0004120!8.76e-13!448;UBERON:0006603!8.76e-13!448;UBERON:0002204!3.24e-09!167;UBERON:0000062!2.38e-07!511;UBERON:0002384!2.53e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.13e-22,76;UBERON:0001474,4.09e-21,82;UBERON:0002390,1.45e-20,98;UBERON:0003061,1.45e-20,98;UBERON:0004765,7.07e-20,90;UBERON:0002193,2.53e-18,108;UBERON:0001434,3.78e-18,100;UBERON:0002405,1.03e-17,93;UBERON:0002384,2.03e-08,371;UBERON:0002204,2.84e-08,167;UBERON:0000926,6.50e-08,315;UBERON:0004120,6.50e-08,315;UBERON:0006603,6.50e-08,315 | |||
|phase1_expression=3.45188920614058,3.63970890614671,6.06103937612676,2.00146596706261,4.02264984984559,1.74467704820074,7.59899634504932,6.31719873426831,3.13422753839806,1.96587149201207,2.79120467188971,1.09220686065086,0.791300934685361,3.7129905888014,1.98838425436749,0.672325146451775,1.20538905604795,0,0.975865597581014,0,0.204000691244253,0.626909442956176,0,0,0,0.0764134057479513,0,0,35.4027849164014,15.3531759238885,24.46094748394,0.919421224478927,0.90361775633475,1.47901604066715,0.387336002901508,0,0.587200878669695,18.8358438900838,21.8593447742454,18.0119022694157,2.46307021663917,2.26725566213286,3.09090681161024,11.4864608635856,12.8477820854195,11.6440349370152,16.7348906572093,28.370584273506,29.7318116059299,21.001544639517,22.5421421745609,20.3374717704183,13.4450815487281,21.3009945582663,13.5426486594342,19.9536879915161,20.7408674043963,16.8542613333813,11.0190201253525,28.8836124368484,13.4260796417799,14.1836059080288,16.7549472402171,14.9178662686443,20.0244374653723,13.0498601678962,17.4390229718761,23.1148772036204,25.5526630025899,26.7142278987293,12.1079900526674,26.8842674270922,12.6584954976354,37.6034409635256,28.2763718953508,29.7715276621894,26.3972283194264,22.0760032477014,14.9474795628285,26.5061851679361,26.6548347446781,30.5049136786939,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0,0,1.68152568894461,0,0.393419540227666,0,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,1.04535523804977,0,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0.534880391567015,0.579297615531196,2.43806866313962,1.34140171940727,0.895037932904712,1.0843174571537,3.50936537445123,2.31754430337318,0,0.486634870302636,0.378139268656271,0.665188192387692,0.702678285545008,1.0478326039817,2.91436230634034,2.59549109949101,2.92092654289215,2.26368658489047,3.58986493400936,0.953962497221368,0.571994910780128,1.11437250398869,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0,32.9451043590158,65.9226449052153,3.92484646928281,0.993943903390637,0.759783069987479,0.662045904066094,1.14734648299525,1.77334191099179,0.560677600142307,1.06748995729705,0.74000264525148,0.311211035399766,0.942974704487816,0.163461903113459,2.11900398702904,1.15235184896,1.87457145467037,5.30672130611545,2.2818872861778,4.33401173600223,0.704606991862589,0.323745888736263,0,0.408308342509787,0.245668634623536,1.44656093646072,1.18800285728205,3.70900393917835,1.82032272387605,4.31170885089743,0,0.250237039743928,0.831192346452549,0,2.75839016219118,3.90618953157152,1.02088964844019,0.358779271377724,1.2813443329114,2.11931901159562,1.20036438433761,0.721367704669072,0,1.30281799432113,1.0126579934476,0.292311015483596,0,1.56484827691909,0.323292113637624,1.06502877754984,0.604512589365842,0.339121184620975,1.15956511897978,0.545492241181669,1.43402297694502,0,0.132529768321485,0,0.725627385107593,0,0.36497735907583,6.25798129319264,1.92972281457866,0,2.3218396401599,4.33127689001751,0.591534000199219,0.337169380156203,0.241011029883482,0.55146986366197,1.30727666455444,0.71181185733329,0.539325232640658,0.392442930250692,0.38474715694639,0.738155454624648,2.80483547606892,0.8231480226628,1.47008711385542,1.26755034821831,4.91413608338813,4.72631925345123,0,1.96781501668982,0.857839051492628,2.74375713521564,0,1.00528972411631,0.925884451585296,2.93227474779292,3.11980435583874,0,0.34779121492523,1.17408694235822,1.15493158208859,0.925971025153221,0.190254152234598,0.790204397959275,2.57545848628462,4.67812311566055,13.806251643215,10.2555501979222,0.93733833986777,0.671928512795438,0.708875486211932,2.05984602216551,3.19697332365358,1.53353071666084,0.985326475791887,0.176096868026452,1.03664057770386,0.576479813667846,0.50496973370552,0.317489471460845,1.52795370223311,0,6.84289784090821,0.514137463516618,0,1.14330573052231,1.00917975910825,0.87192013766656,0.80672114403045,0.904902010304444,0,3.381211010224,2.39344304926383,0,0.771622122786426,0,0.266422179016099,2.7165818795048,4.34097284313154,1.64648067356154,0.977208552881205,2.48774364119782,0,7.83742380354924,4.35766729300147,5.69846049737725,7.29742683847143,2.00902836572851,16.8667151586425,1.67737398844108,2.29723871668228,0,1.73737568001095,1.02738161275192,0.895304816199478,1.12085143993527,0.591092280605782,0.215627574859517,1.02674429023799,0.254094624222463,0,0.773288812777695,0.167516265334349,0,28.4622669099929,38.8909896965232,20.3063601583657,1.96306386750624,2.00068208423871,0.542530047399471,2.07970861530807,2.49800584316026,0.788512075169673,1.17141414992713,0.601892199455438,6.82222512167955,5.17365356462525,0,0.921845842708516,1.82455590382974,1.17480694477644,1.37257369524342,11.1654734106359,14.2371372540287,8.11129439306177,0.303127571446259,1.66435439510497,1.5119514666484,3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| |||
|short_description=p3@CEBPB | |||
}} |
Latest revision as of 20:49, 16 September 2015
Short description: | p3@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CEBPB_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 80bp_to_ENST00000303004, uc002xvh.2, uc002xvi.1_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | P17676 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.77e-35 | 48 |
phagocyte | 1.77e-35 | 48 |
myeloid leukocyte | 2.78e-34 | 72 |
monopoietic cell | 2.81e-32 | 59 |
monocyte | 2.81e-32 | 59 |
monoblast | 2.81e-32 | 59 |
promonocyte | 2.81e-32 | 59 |
classical monocyte | 4.14e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.14e-32 | 42 |
macrophage dendritic cell progenitor | 3.13e-30 | 61 |
myeloid lineage restricted progenitor cell | 2.41e-26 | 66 |
granulocyte monocyte progenitor cell | 2.62e-26 | 67 |
myeloid cell | 4.81e-13 | 108 |
common myeloid progenitor | 4.81e-13 | 108 |
connective tissue cell | 3.28e-09 | 361 |
mesenchymal cell | 1.56e-08 | 354 |
intermediate monocyte | 1.95e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.95e-08 | 9 |
leukocyte | 2.32e-08 | 136 |
nongranular leukocyte | 6.11e-08 | 115 |
granulocyte | 9.37e-08 | 8 |
blood cell | 1.07e-07 | 11 |
fat cell | 6.85e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.13e-22 | 76 |
bone element | 4.09e-21 | 82 |
hematopoietic system | 1.45e-20 | 98 |
blood island | 1.45e-20 | 98 |
skeletal element | 7.07e-20 | 90 |
hemolymphoid system | 2.53e-18 | 108 |
skeletal system | 3.78e-18 | 100 |
immune system | 1.03e-17 | 93 |
connective tissue | 2.03e-08 | 371 |
musculoskeletal system | 2.84e-08 | 167 |
mesoderm | 6.50e-08 | 315 |
mesoderm-derived structure | 6.50e-08 | 315 |
presumptive mesoderm | 6.50e-08 | 315 |