FFCP PHASE1:Hg19::chr20:3003336..3003354,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:3003336..3003354,+ | |||
|description=CAGE_peak_at_chr20:3003336..3003354,+ | |||
|id=chr20:3003336..3003354,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;3.00e-07;1!CL:0002625;3.00e-07;1!CL:0000216;3.00e-07;1!CL:0002591;3.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.63e-07,1;CL:0002625,1.63e-07,1;CL:0000216,1.63e-07,1;CL:0002591,4.08e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.00e-07;1!UBERON:0004874;3.00e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;3.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.98e-11!57;UBERON:0005068!5.98e-11!57;UBERON:0006241!5.98e-11!57;UBERON:0007135!5.98e-11!57;UBERON:0002020!7.93e-10!34;UBERON:0003528!7.93e-10!34;UBERON:0002616!1.41e-09!59;UBERON:0001893!3.30e-09!34;UBERON:0002791!4.86e-09!33;UBERON:0001017!8.78e-09!82;UBERON:0000955!1.26e-08!69;UBERON:0006238!1.26e-08!69;UBERON:0007023!1.66e-08!115;UBERON:0005743!1.90e-08!86;UBERON:0001869!2.38e-08!32;UBERON:0000033!2.67e-08!123;UBERON:0000153!3.02e-08!129;UBERON:0007811!3.02e-08!129;UBERON:0002780!6.31e-08!41;UBERON:0001890!6.31e-08!41;UBERON:0006240!6.31e-08!41;UBERON:0003075!8.03e-08!86;UBERON:0007284!8.03e-08!86;UBERON:0000073!9.33e-08!94;UBERON:0001016!9.33e-08!94;UBERON:0002346!1.48e-07!90;UBERON:0003080!1.87e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;7.95e-13;2!UBERON:0003022;7.95e-13;2!UBERON:0002421;7.95e-13;2!UBERON:0002600;7.95e-13;2!UBERON:0002619;6.03e-09;22!UBERON:0003528;4.60e-08;34!UBERON:0002020;4.60e-08;34!UBERON:0002791;6.93e-08;32!UBERON:0001869;6.93e-08;32!UBERON:0000956;7.60e-08;25!UBERON:0000203;7.60e-08;25!UBERON:0003112;3.00e-07;1!UBERON:0000989;3.00e-07;1!UBERON:0000998;3.00e-07;1!UBERON:0001136;3.00e-07;1!UBERON:0001343;3.00e-07;1!UBERON:0002171;3.00e-07;1!UBERON:0008811;3.00e-07;1!UBERON:0006868;3.00e-07;1!UBERON:0011158;3.00e-07;1!UBERON:0006518;3.00e-07;1!UBERON:0008949;3.00e-07;1!UBERON:0004910;3.00e-07;1!UBERON:0000101;3.00e-07;1!UBERON:0004813;3.00e-07;1!UBERON:0003128;3.00e-07;1!UBERON:0002167;3.00e-07;1!UBERON:0001703;3.00e-07;1!UBERON:0002241;3.00e-07;1!UBERON:0001893;4.65e-07;34!UBERON:0005904;7.83e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,4.68e-13,2;UBERON:0003022,4.68e-13,2;UBERON:0002421,4.68e-13,2;UBERON:0002600,4.68e-13,2;UBERON:0003528,1.06e-09,34;UBERON:0002020,1.06e-09,34;UBERON:0002619,6.12e-09,22;UBERON:0002791,4.79e-08,32;UBERON:0001869,4.79e-08,32;UBERON:0000956,7.69e-08,25;UBERON:0000203,7.69e-08,25;UBERON:0003112,1.54e-07,1;UBERON:0011158,1.54e-07,1;UBERON:0003128,1.54e-07,1;UBERON:0001703,1.54e-07,1;UBERON:0002241,1.54e-07,1;UBERON:0004761,1.54e-07,1;UBERON:0009617,1.54e-07,1;UBERON:0001893,1.55e-07,34;UBERON:0001136,1.63e-07,1;UBERON:0001343,1.63e-07,1;UBERON:0004910,1.63e-07,1;UBERON:0005154,1.63e-07,1;UBERON:0005295,1.63e-07,1;UBERON:0004813,1.63e-07,1;UBERON:0005297,1.63e-07,1;UBERON:0005294,1.63e-07,1;UBERON:0010141,1.63e-07,1;UBERON:0005891,1.63e-07,1;UBERON:0000989,1.85e-07,1;UBERON:0008811,1.85e-07,1;UBERON:0006258,1.85e-07,1;UBERON:0005876,1.85e-07,1;UBERON:0004874,1.85e-07,1;UBERON:0000998,2.67e-07,1;UBERON:0006868,2.67e-07,1;UBERON:0002171,2.84e-07,1;UBERON:0006518,2.84e-07,1;UBERON:0008949,2.84e-07,1;UBERON:0000101,2.84e-07,1;UBERON:0002167,2.84e-07,1;UBERON:0005904,5.52e-07,4 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0.446961094427288,0,0,0,1.04474251279935,0,0,0,0.263766978228454,0.618831764800233,0.662794751455832,0,1.20538905604795,0,0,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0.300353785683013,0,0.285012743741249,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.411202997999018,0.167186495390678,0,0,1.94826728407911,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0.493313713811028,0.276350017785848,0,0,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0,1.06976078313403,0.579297615531196,0,0,0.12786256184353,0.361439152384566,0,1.30361867064741,0.795285947051099,0,0.283604451492204,0.665188192387692,0,0.0654895377488563,0.728590576585084,0.370784442784429,0.324547393654683,0,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,1.06748995729705,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,2.30470369792,0,0,0,0.298897361103602,0,0,0.280901613404497,0.204154171254893,0.368502951935304,0,1.18800285728205,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0.558350568994769,0.168776332241266,0.292311015483596,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0.339121184620975,0,0,0,0.243947412259191,0.132529768321485,0.580969714347592,0.414644220061482,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.236613600079688,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0.201057944823262,0.277765335475589,0,0,1.44331342025273,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.492434012174795,0,0.297262324577456,0,0.16798212819886,0,0.268675568108545,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0.763976851116555,0,0,0.308482478109971,0.901029173531752,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0,0.710783897485092,0,0.301439377059586,0,0,0,0.502257091432126,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0.773288812777695,0,1.91381625495949,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.623912584592421,0.713715955188647,0.315404830067869,0.117141414992713,0,0,0,1.32845119707087,0,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0.841980283299221,0,0,0,0,0.616838775210622,0.532685175939381,0,0.519254429183621,0.116210378459959,0.362578348774867,0,0.276242966807689,0.34444334449382,0.182091168006717,0.393373244878272,0,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0.15350367472613,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0,0.2023155617111,0.929691098594572,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0.359744915166629,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,0,0,0.578775534266688,0,0,0.6196469961995,0,0.286822704408103,0.0982490410131212,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0,0.144269212976445,0.0711418433484141,0,0.798317485731266,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0.642352300414798,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0.921482106297696,0,0.140669416410513,0.111308705022906,0.329607748453519,0.211125408127993,0.19924798825107,0,0.503865495708552,0,0,0.622079175323615,0,0.179021174675609,0.511572370226872,0.295930216910801,0,0,0.969332746095218,0.278304294485554,0,0.260427761085233,0.0874599999961957,0,0.227586896570999,0,0,0,0,0.173624994933292,0.885741385813839,1.08536794762867,0,0.552896299656123,0.591095237907095,0,0.32681539055697,0.139423744278603,0.153900517007594,0.227884111694002,0,0,0.325942115766024,0.31900115973192,0,0.533034776018635,1.02193298195737,0.31396051279005,0,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0.158936578980379,0.4219961290560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| |||
|short_description=p@chr20:3003336..3003354,+ | |||
}} |
Latest revision as of 12:48, 28 July 2015
Short description: | p@chr20:3003336..3003354, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:3003336..3003354, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.63e-07 | 1 |
seminiferous tubule epithelial cell | 1.63e-07 | 1 |
Sertoli cell | 1.63e-07 | 1 |
smooth muscle cell of the pulmonary artery | 4.08e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.85e-07 | 1 |