FFCP PHASE1:Hg19::chr20:19955497..19955515,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18750 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WYP3 | |||
|association_with_transcript=-426bp_to_M37190_5end | |||
|cluster_id=chr20:19955497..19955515,+ | |||
|description=CAGE_peak_15_at_RIN2_5end | |||
|id=chr20:19955497..19955515,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-21!180;CL:0000057!1.41e-13!75;CL:0002620!3.86e-08!23;CL:0000680!4.05e-08!57;CL:0000056!4.05e-08!57;CL:0000355!4.05e-08!57;CL:0002539!5.61e-08!10;CL:0000187!1.05e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002539;1.48e-11;10!CL:0000346;1.29e-08;3!CL:1000428;1.29e-08;3!CL:0002559;2.59e-08;5!CL:0000048;3.84e-08;58!CL:0000135;6.30e-08;3!CL:0000388;6.30e-08;3!CL:0000723;2.62e-07;61!CL:0002570;4.51e-07;8!CL:0000134;4.62e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,9.12e-12,10;CL:0000346,1.17e-08,3;CL:1000428,1.17e-08,3;CL:0002559,1.44e-08,5;CL:0000135,7.21e-08,3;CL:0000388,7.21e-08,3;CL:0000057,4.06e-07,76;CL:0002570,6.14e-07,8;CL:0002334,8.31e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.10e-08;5!DOID:450;7.10e-08;5!DOID:66;7.10e-08;5!DOID:423;7.10e-08;5!DOID:0080000;7.10e-08;5!DOID:11722;7.10e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.51e-08,5;DOID:450,4.51e-08,5;DOID:66,4.51e-08,5;DOID:423,4.51e-08,5;DOID:0080000,4.51e-08,5;DOID:11722,4.51e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.76e-10!365;UBERON:0000914!3.32e-09!83;UBERON:0002329!3.32e-09!83;UBERON:0003077!3.32e-09!83;UBERON:0003059!3.32e-09!83;UBERON:0007282!3.32e-09!83;UBERON:0009618!3.32e-09!83;UBERON:0007285!3.32e-09!83;UBERON:0004290!8.65e-09!70;UBERON:0003102!3.66e-08!95;UBERON:0001135!4.68e-08!15;UBERON:0004237!5.61e-08!10;UBERON:0004695!5.61e-08!10;UBERON:0002111!5.61e-08!10;UBERON:0004178!5.61e-08!10;UBERON:0000481!7.91e-08!347;UBERON:0002385!5.12e-07!63;UBERON:0001015!5.12e-07!63;UBERON:0000383!5.12e-07!63;UBERON:0005256!5.77e-07!143;UBERON:0002097!6.32e-07!40;UBERON:0000486!7.03e-07!82;UBERON:0002199!8.78e-07!45;UBERON:0002416!8.78e-07!45;UBERON:0001134!9.71e-07!61;UBERON:0002036!9.71e-07!61;UBERON:0003082!9.71e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.48e-11;10!UBERON:0004695;1.48e-11;10!UBERON:0002111;1.48e-11;10!UBERON:0004178;1.48e-11;10!UBERON:0000412;1.29e-08;3!UBERON:0001992;1.29e-08;3!UBERON:0002073;2.59e-08;5!UBERON:0007846;6.30e-08;3!UBERON:0000043;6.30e-08;3!UBERON:0007845;6.30e-08;3!UBERON:0001135;2.79e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,9.12e-12,10;UBERON:0004695,9.12e-12,10;UBERON:0002111,9.12e-12,10;UBERON:0004178,9.12e-12,10;UBERON:0000412,1.17e-08,3;UBERON:0001992,1.17e-08,3;UBERON:0002073,1.44e-08,5;UBERON:0005086,1.44e-08,5;UBERON:0007846,7.21e-08,3;UBERON:0000043,7.21e-08,3;UBERON:0007845,7.21e-08,3;UBERON:0001135,2.06e-07,15;UBERON:0002199,6.29e-07,46;UBERON:0002416,6.29e-07,46 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,1.39560233594486,0,0.263766978228454,1.11389717664042,0,5.3786011716142,7.8350288643117,5.84248072309899,3.41552959153355,0.61560529038394,0.816002764977012,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0,0,0.869079113764942,0,0.973269740605272,0.756278537312543,0.665188192387692,0.351339142772504,0.458426764241994,0.364295288292542,1.11235332835329,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.397227542439656,0,1.77334191099179,1.68203280042692,0,0.24666754841716,0.311211035399766,0.134710672069688,0.653847612453835,0.302714855289863,0.576175924479999,0.468642863667593,0,0.570471821544449,0.597794722207204,0.469737994575059,0.161872944368132,0.280901613404497,0.204154171254893,0.491337269247072,0,0,0.989067717114227,0,0.718618141816238,0,0.125118519871964,0,0.877955241761676,0.30648779579902,0.751190294532984,0.453728732640084,1.79389635688862,0.85422955527427,3.81477422087211,1.50045548042201,2.06105058476878,0.515281080091258,0.930584281657949,0.168776332241266,0.68205903612839,1.7670364197088,1.01254888506529,0.80823028409406,0,0.906768884048762,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,4.69348596989448,3.21620469096443,2.76269842704961,1.85747171212792,0.721879481669586,0,0,0.241011029883482,0.55146986366197,0.217879444092406,0.474541238222193,0.269662616320329,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0.514703430895577,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.469634776943287,0,0,0,0,0,0.246217006087397,0,0,0,0.503946384596579,0.425325291727159,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,1.00917975910825,0.87192013766656,1.0267360014933,4.26596662000667,0,0,1.32969058292435,3.12022310734098,0,0,0.266422179016099,1.71573592389777,1.08524321078289,0,0.65147236858747,2.48774364119782,0.791951872933429,0,1.74306691720059,0.199945982364114,1.2162378064119,0.502257091432126,0,0.239624855491583,0,2.85273810081437,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.49076596687656,0.500170521059677,0,0.207970861530807,0,0.473107245101804,0.234282829985426,1.20378439891088,2.27407504055985,0,0.664225598535437,0.921845842708516,0.695068915744663,0,0,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0.280660094433074,0.384417447767103,0,2.73451665944133,1.48418066444991,4.78050050788232,3.19611105563629,1.8067974323038,0,1.62694529843943,0.120859449591622,0.200506470303285,0,0.574072240823034,0.728364672026868,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0.863663664408557,0,0,0,0,0.831076008928724,0,0,0,2.05160100093111,1.64007322849853,0.325378394664303,0.206082023295445,0.183138929636687,0.495056999523528,1.14853107599234,0,0,0.676695028044854,0.924291702687866,0.15350367472613,0.275673144969061,0.751941714077915,0.725083469571143,0.255679882248303,0.534192213880424,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,1.39453664789186,0.62962469366128,2.7881490806424,1.84820148105653,0.532306030317022,0.869932992075073,0.9266210955196,0.286249773483982,0,0,0.38126038784765,0,0,0.95460974377781,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,0,1.9109987597118,1.55545975149084,2.26016233240486,0,0,0,0,0,0.608731130888112,0.92947049429925,0.845086807596724,0,0.392996164052485,1.07001315444375,0,1.26664581178598,0,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0.852408440419239,0,0,0,0,0.281338832821026,0.111308705022906,0,1.47787785689595,0,0,0,0.20453736500431,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,1.52581736317083,0,0,0.438770794307945,0.21787692703798,0.41827123283581,0.692552326534174,0.113942055847001,0,0,0,0,1.4655614944298,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0.141353071433941,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.379119477770928,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0.489961987071888,1.30588809870604,0.34945333648406,0.859930162358083,0,0,0,0,0,0,0.137041924646751,0.397429223405979,0.126621591911757,0,0.400794101257669,0.640358984218058,0.39961921916426,0,0.114536596165916,0,0.14405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| |||
|short_description=p15@RIN2 | |||
}} |
Latest revision as of 16:36, 24 September 2015
Short description: | p15@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -426bp_to_M37190_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 9.12e-12 | 10 |
hair follicle dermal papilla cell | 1.17e-08 | 3 |
stem cell of epidermis | 1.17e-08 | 3 |
hair follicle cell | 1.44e-08 | 5 |
fibrocyte | 7.21e-08 | 3 |
tendon cell | 7.21e-08 | 3 |
fibroblast | 4.06e-07 | 76 |
mesenchymal stem cell of adipose | 6.14e-07 | 8 |
preadipocyte | 8.31e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 9.12e-12 | 10 |
arterial system smooth muscle | 9.12e-12 | 10 |
artery smooth muscle tissue | 9.12e-12 | 10 |
aorta smooth muscle tissue | 9.12e-12 | 10 |
dermal papilla | 1.17e-08 | 3 |
papillary layer of dermis | 1.17e-08 | 3 |
hair follicle | 1.44e-08 | 5 |
hair follicle placode | 1.44e-08 | 5 |
dense regular connective tissue | 7.21e-08 | 3 |
tendon | 7.21e-08 | 3 |
regular connective tissue | 7.21e-08 | 3 |
smooth muscle tissue | 2.06e-07 | 15 |
integument | 6.29e-07 | 46 |
integumental system | 6.29e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.51e-08 | 5 |
myotonic disease | 4.51e-08 | 5 |
muscle tissue disease | 4.51e-08 | 5 |
myopathy | 4.51e-08 | 5 |
muscular disease | 4.51e-08 | 5 |
myotonic dystrophy | 4.51e-08 | 5 |