FFCP PHASE1:Hg19::chr1:936318..936336,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:936318..936336,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr1:936318..936336,+ | |||
|id=chr1:936318..936336,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.04e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002188;7.11e-10;5!CL:1000746;2.69e-07;7!CL:1000612;2.69e-07;7!CL:1000449;3.25e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,6.22e-10,5;CL:1000746,2.45e-07,7;CL:1000612,2.45e-07,7;CL:1000449,3.02e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.60e-12;1!UBERON:0003918;9.86e-11;10!UBERON:0007687;9.86e-11;10!UBERON:0007297;8.76e-07;2 | |||
|ontology_enrichment_disease=DOID:305!1.35e-15!106;DOID:0050687!5.93e-14!143;DOID:162!1.00e-08!235;DOID:14566!3.70e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.25e-11!9;UBERON:0003075!1.10e-07!86;UBERON:0007284!1.10e-07!86;UBERON:0002346!1.85e-07!90;UBERON:0000064!8.33e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.60e-12;1!UBERON:0006868;2.60e-12;1!UBERON:0002113;1.30e-11;24!UBERON:0011143;1.30e-11;24!UBERON:0000489;1.36e-09;29!UBERON:0006554;2.86e-09;30!UBERON:0001008;2.86e-09;30!UBERON:0000074;2.69e-07;7!UBERON:0001229;2.69e-07;7!UBERON:0006555;3.25e-07;15!UBERON:0004819;3.25e-07;15!UBERON:0001285;3.25e-07;15!UBERON:0007684;3.25e-07;15!UBERON:0001905;8.76e-07;2!UBERON:0002757;8.76e-07;2!UBERON:0010134;8.76e-07;2!UBERON:0005408;8.76e-07;2!UBERON:0001899;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.22e-15,26;UBERON:0003918,4.22e-15,26;UBERON:0011143,4.22e-15,26;UBERON:0005095,4.22e-15,26;UBERON:0007687,4.22e-15,26;UBERON:0000489,1.31e-12,31;UBERON:0000998,3.08e-12,1;UBERON:0006868,3.08e-12,1;UBERON:0000080,1.05e-11,9;UBERON:0002120,1.05e-11,9;UBERON:0004875,1.05e-11,9;UBERON:0005721,1.05e-11,9;UBERON:0005754,1.05e-11,9;UBERON:0007297,1.05e-11,9;UBERON:0004876,1.12e-09,11;UBERON:0003887,6.51e-09,12;UBERON:0006554,3.49e-08,47;UBERON:0001008,5.28e-08,48;UBERON:0010532,2.45e-07,7;UBERON:0000074,2.45e-07,7;UBERON:0001229,2.45e-07,7;UBERON:0001230,2.45e-07,7;UBERON:0003220,2.45e-07,7;UBERON:0005749,2.45e-07,7;UBERON:0004199,2.45e-07,7;UBERON:0004209,2.45e-07,7;UBERON:0004198,2.45e-07,7;UBERON:0004211,3.02e-07,15;UBERON:0009773,3.02e-07,15;UBERON:0001231,3.02e-07,15;UBERON:0001285,3.02e-07,15;UBERON:0007684,3.02e-07,15;UBERON:0004208,3.02e-07,15;UBERON:0005172,4.56e-07,54;UBERON:0005173,4.56e-07,54;UBERON:0006555,8.00e-07,16;UBERON:0004819,8.00e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.482022059766964,0.441175890929576,1.52515610864684,1.66089433377768,0.404493924480493,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.50496973370552,0.126995788584338,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,1.91381625495949,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,1.46139224653261,0.105551628892876,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.165018999841176,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0,0,0.494411622680279,0.422250816255987,0.398495976502139,0,0.251932747854276,0,0,0,0.0898683511473268,0.895105873378046,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0.236387681767936,0.344743373241465,0.583209226766509,0,0,0,0,0,0,0,1.52513848926586,0,0.153900517007594,0.113942055847001,0,0,0.217294743844016,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,0,2.6686901581256,1.11207545051853,0.939797545549098,0.067401132980677,0,0,0,0.19566461893209,0.485560759068186,0.394584402849391,0,0.91821828489147,0,17.4375166520811,2.07376382794494,0,0,0,0,0.284609546029793,0,0,0,0.261177619741208,0.34945333648406,0,0.774050650312681,0.292357268344742,0.410577285266046,0,0.353024506766001,0.225980740780532,0,0.19871461170299,0.126621591911757,0,0.0801588202515337,0,0.19980960958213,0,0.229073192331831,0,4.89786313159709,0,0.707082103850386,0,0,0.203996435272644,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0.0787831823072236,0,0.202210631562555,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.364497339948148,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0,0,0.124980407962107,0,0.570930667089935,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.428883182749851,0.521988583930423,0,0,0,0,0,0.438568099157414,0.176689145945881,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0.567515953566836,0,0.279759015438889,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.596748666348824,0,0,0,0.261906694481422,0,0,0.202612753855184,0.781078098613847,0,0.19024743058172,0.546974809018219,0,0,0,0.127762427639595,1.07140367175657,0,0,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0.197318320688547,0.236387681767936,0.333694205676207,0.078493092850514,0.157115589916002,0.560544326627578,0,0,0,0.214429632529969,2.68623139945635,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0.223710863595585,0,0.243835849964539,0,0.205325613712494,0,0.485710993059139,0,0.596852325484105,0,0.33883824611688,0,0.754814217833368,0,0,0,0.245148321753905,0.235676547101626,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,1.36410323371586,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0.533636729388577,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:936318..936336,+ | |||
}} |
Latest revision as of 11:24, 28 July 2015
Short description: | p@chr1:936318..936336, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:936318..936336, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 6.22e-10 | 5 |
glomerular cell | 2.45e-07 | 7 |
kidney corpuscule cell | 2.45e-07 | 7 |
epithelial cell of nephron | 3.02e-07 | 15 |