FFCP PHASE1:Hg19::chr1:90286755..90286762,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16992 | |||
|TSSclassifier=strong | |||
|UniProt=Q7L1W4 | |||
|association_with_transcript=164bp_to_ENST00000337338_5end | |||
|cluster_id=chr1:90286755..90286762,+ | |||
|description=CAGE_peak_19_at_LRRC8D_5end | |||
|id=chr1:90286755..90286762,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002231;6.34e-08;3!CL:0000307;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.26e-08,3;CL:0000069,7.26e-08,3;CL:0000307,7.26e-08,3;CL:0000377,7.26e-08,3;CL:0002231,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.22e-21;1!CL:0000377;6.34e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.36e-08!106;DOID:0050687!2.12e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002368!4.04e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;4.22e-21;1!UBERON:0001567;4.22e-21;1!UBERON:0001905;3.02e-11;2!UBERON:0001829;3.02e-11;2!UBERON:0002757;3.02e-11;2!UBERON:0010134;3.02e-11;2!UBERON:0005408;3.02e-11;2!UBERON:0004089;3.02e-11;2!UBERON:0001899;3.02e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,5.16e-21,1;UBERON:0001567,5.16e-21,1;UBERON:0008801,5.16e-21,1;UBERON:0001829,3.35e-11,2;UBERON:0004089,3.35e-11,2;UBERON:0001905,4.52e-11,2;UBERON:0002757,4.52e-11,2;UBERON:0010134,4.52e-11,2;UBERON:0005408,4.52e-11,2;UBERON:0001899,4.52e-11,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0.0787107813136792,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.411202997999018,0,0.651844533267181,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0.276350017785848,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0.435758888184812,0.237270619111097,0.269662616320329,0,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,1.01289087829486,0,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0,0.495854746082934,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0,0,0.192444225451024,0,1.08890984861323,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.445773537109913,0,0,0,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0.369254416383208,0,0.179736702294654,0.537063524026827,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0.173624994933292,0.885741385813839,0.120596438625408,0,0.221158519862449,0.591095237907095,0.219385397153973,0.21787692703798,1.39423744278603,0,0.113942055847001,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0.421996129056054,0,0.141353071433941,0,0,1.14994833854341,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0.391969589657511,0.174118413160805,0,0,0.0967563312890851,0.292357268344742,0,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0.126621591911757,0.195551382734803,0.240476460754601,0,0,0.144090417154106,0,0,0,0.372757606696298,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0.134366944973453,0,0,0.472699093843342,0.906574442192831,0.539228350833479,0.0984274815147488,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0.472834243795189,0.157363764404994,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0,0,0.439656701034247,0,0,0,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.366078794705889,0,0,0.110929051536852,0.0620964029413835,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0,0.463044948647668,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0,0.303859956177382,0,0.389720617678777,0.132864840313363,0.327130788511688,0,0.245772908753719,0.211312123358627,0.19998739585493,0.213383459388282,0.172214979660816,0,0,0.419638523158333,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0,0,0,0.345786262321089,0,0,0.0981477185010256,0.235939446695481,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.253663240775627,0,1.09651553371436,0,0.351742488719241,0,0,1.00885116665647,0,0.455324382702595,0.0887023701626388,0.115233987555779,0,0.339848664884159,0.131545547125698,0.118193840883968,0.111231401892069,0,0.314231179832004,0.280272163313789,0.913158720509496,0.431855182437243,0,0.285906176706625,0,0,0.173858272302579,0,0,0,0,0,0,0.340853619036631,0,0.22910686854405,0,0,0,0.098150233615243,0.365753774946808,0,0,0,0,0,0,0.118920090777569,0.22589216407792,0,0.150962843566674,2.85544384999395,0.655678681511872,0,0,0.471353094203252,0,0,0.4226557275834,0.339854229375634,0,0,0,0.357107877211315,0,0,0,0.458729283404541,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0.0645889098360061,0.124149428591716,0.224263725161227,0,0.202117188958219,0,0,0,0.215166616178029,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p19@LRRC8D | |||
}} |
Latest revision as of 18:10, 19 September 2015
Short description: | p19@LRRC8D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_LRRC8D_5end |
Coexpression cluster: | NA |
Association with transcript: | 164bp_to_ENST00000337338_5end |
EntrezGene: | LRRC8D |
HGNC: | 16992 |
UniProt: | Q7L1W4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.26e-08 | 3 |
branched duct epithelial cell | 7.26e-08 | 3 |
tracheal epithelial cell | 7.26e-08 | 3 |
tracheoblast | 7.26e-08 | 3 |
epithelial cell of prostate | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 5.16e-21 | 1 |
cheek | 5.16e-21 | 1 |
parotid gland primordium | 5.16e-21 | 1 |
major salivary gland | 3.35e-11 | 2 |
midface | 3.35e-11 | 2 |
pineal body | 4.52e-11 | 2 |
regional part of epithalamus | 4.52e-11 | 2 |
secretory circumventricular organ | 4.52e-11 | 2 |
circumventricular organ | 4.52e-11 | 2 |
epithalamus | 4.52e-11 | 2 |