FFCP PHASE1:Hg19::chr1:87794150..87794172,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8543 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6644 | |||
|TSSclassifier=strong | |||
|UniProt=P61968 | |||
|association_with_transcript=0bp_to_ENST00000370544,NM_006769,uc001dmi.2_5end | |||
|cluster_id=chr1:87794150..87794172,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_LMO4_5end | |||
|id=chr1:87794150..87794172,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.74e-24!57;UBERON:0005068!3.74e-24!57;UBERON:0006241!3.74e-24!57;UBERON:0007135!3.74e-24!57;UBERON:0005743!5.14e-24!86;UBERON:0001017!4.64e-23!82;UBERON:0000073!5.45e-23!94;UBERON:0001016!5.45e-23!94;UBERON:0003080!1.71e-21!42;UBERON:0002780!2.33e-21!41;UBERON:0001890!2.33e-21!41;UBERON:0006240!2.33e-21!41;UBERON:0003075!7.23e-20!86;UBERON:0007284!7.23e-20!86;UBERON:0002020!7.56e-20!34;UBERON:0003528!7.56e-20!34;UBERON:0001893!7.89e-20!34;UBERON:0001869!1.17e-19!32;UBERON:0002346!2.90e-19!90;UBERON:0002791!3.39e-19!33;UBERON:0002616!3.47e-18!59;UBERON:0003056!5.31e-18!61;UBERON:0000955!1.78e-17!69;UBERON:0006238!1.78e-17!69;UBERON:0000956!2.03e-16!25;UBERON:0000203!2.03e-16!25;UBERON:0002619!1.15e-15!22;UBERON:0001950!1.74e-14!20;UBERON:0007023!3.68e-14!115;UBERON:0004121!1.13e-09!169;UBERON:0000924!1.37e-09!173;UBERON:0006601!1.37e-09!173;UBERON:0000064!8.51e-09!219;UBERON:0000033!5.63e-08!123;UBERON:0000153!1.55e-07!129;UBERON:0007811!1.55e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.90e-18;32!UBERON:0002791;1.30e-17;32!UBERON:0003528;2.50e-17;34!UBERON:0002020;2.50e-17;34!UBERON:0001893;3.27e-17;34!UBERON:0000956;1.92e-16;25!UBERON:0000203;1.92e-16;25!UBERON:0002619;1.11e-15;22!UBERON:0002780;1.65e-15;41!UBERON:0001890;1.65e-15;41!UBERON:0001950;1.68e-14;20!UBERON:0000073;5.28e-13;53!UBERON:0002616;5.28e-13;53!UBERON:0000955;1.10e-08;68!UBERON:0001017;2.08e-08;75!UBERON:0001016;2.53e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.51e-24,56;UBERON:0005068,5.51e-24,56;UBERON:0006241,5.51e-24,56;UBERON:0007135,5.51e-24,56;UBERON:0001017,7.46e-23,81;UBERON:0000073,9.14e-23,53;UBERON:0002616,9.14e-23,53;UBERON:0001016,8.24e-22,89;UBERON:0002780,2.33e-21,41;UBERON:0001890,2.33e-21,41;UBERON:0003080,2.33e-21,41;UBERON:0006240,2.33e-21,41;UBERON:0003075,6.89e-20,82;UBERON:0007284,6.89e-20,82;UBERON:0003528,7.55e-20,34;UBERON:0002020,7.55e-20,34;UBERON:0001893,7.89e-20,34;UBERON:0001869,1.17e-19,32;UBERON:0002791,2.77e-19,32;UBERON:0002346,3.00e-19,86;UBERON:0003056,1.05e-17,61;UBERON:0000955,2.83e-17,68;UBERON:0006238,2.83e-17,68;UBERON:0000956,2.03e-16,25;UBERON:0000203,2.03e-16,25;UBERON:0002619,1.15e-15,22;UBERON:0001950,1.74e-14,20;UBERON:0007023,1.06e-13,114;UBERON:0010371,1.03e-12,104;UBERON:0010314,3.22e-12,132;UBERON:0004121,1.63e-09,171;UBERON:0000924,1.63e-09,171;UBERON:0006601,1.63e-09,171;UBERON:0011216,6.91e-09,223 | |||
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| |||
|short_description=p2@LMO4 | |||
}} |
Latest revision as of 15:16, 19 September 2015
Short description: | p2@LMO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMO4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000370544, NM_006769, uc001dmi.2_5end |
EntrezGene: | LMO4 |
HGNC: | 6644 |
UniProt: | P61968 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data