FFCP PHASE1:Hg19::chr1:81772113..81772122,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18582 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=229bp_to_ENST00000469377_5end | |||
|cluster_id=chr1:81772113..81772122,+ | |||
|coexpression_cluster_id=C185 | |||
|description=CAGE_peak_17_at_LPHN2_5end | |||
|id=chr1:81772113..81772122,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.10e-10;29!UBERON:0001041;6.23e-10;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.49e-34!20;UBERON:0001869!5.51e-32!32;UBERON:0002619!4.25e-31!22;UBERON:0001893!6.03e-30!34;UBERON:0002780!1.09e-27!41;UBERON:0001890!1.09e-27!41;UBERON:0006240!1.09e-27!41;UBERON:0000956!3.50e-27!25;UBERON:0000203!3.50e-27!25;UBERON:0002791!5.76e-27!33;UBERON:0003080!5.96e-27!42;UBERON:0002020!4.25e-26!34;UBERON:0003528!4.25e-26!34;UBERON:0007023!1.14e-24!115;UBERON:0001049!6.74e-24!57;UBERON:0005068!6.74e-24!57;UBERON:0006241!6.74e-24!57;UBERON:0007135!6.74e-24!57;UBERON:0002616!5.93e-23!59;UBERON:0003056!3.97e-22!61;UBERON:0000955!4.48e-21!69;UBERON:0006238!4.48e-21!69;UBERON:0000200!7.91e-20!6;UBERON:0003075!4.80e-18!86;UBERON:0007284!4.80e-18!86;UBERON:0005743!6.33e-18!86;UBERON:0001017!4.28e-17!82;UBERON:0002346!4.86e-17!90;UBERON:0000073!8.19e-16!94;UBERON:0001016!8.19e-16!94;UBERON:0000033!1.71e-15!123;UBERON:0002771!2.03e-15!3;UBERON:0001871!1.24e-14!7;UBERON:0000153!1.56e-14!129;UBERON:0007811!1.56e-14!129;UBERON:0000481!2.85e-10!347;UBERON:0000477!2.25e-09!286;UBERON:0000025!4.95e-09!194;UBERON:0001872!7.66e-09!5;UBERON:0004121!9.77e-09!169;UBERON:0002021!1.09e-08!5;UBERON:0000924!2.00e-08!173;UBERON:0006601!2.00e-08!173;UBERON:0000064!3.36e-07!219;UBERON:0004111!5.36e-07!241;UBERON:0002106!5.44e-07!3;UBERON:0004854!5.44e-07!3;UBERON:0009034!5.44e-07!3;UBERON:0002095!5.44e-07!3;UBERON:0004782!5.44e-07!3;UBERON:0003281!5.44e-07!3;UBERON:0009664!5.44e-07!3;UBERON:0002296!5.44e-07!3;UBERON:0005602!5.44e-07!3;UBERON:0001179!5.44e-07!3;UBERON:0006293!5.44e-07!3;UBERON:0000062!6.91e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;4.01e-13;22!UBERON:0000117;4.01e-13;22!UBERON:0000171;4.01e-13;22!UBERON:0000170;4.01e-13;22!UBERON:0005178;5.59e-08;34!UBERON:0002224;5.59e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.01e-13,22;UBERON:0000117,4.01e-13,22;UBERON:0000171,4.01e-13,22;UBERON:0000170,4.01e-13,22;UBERON:0005597,4.01e-13,22;UBERON:0000118,4.01e-13,22;UBERON:0005178,6.80e-09,34;UBERON:0002224,6.80e-09,34;UBERON:0005181,1.14e-08,35;UBERON:0005153,2.92e-08,37;UBERON:0008947,4.52e-08,38;UBERON:0003258,4.52e-08,38;UBERON:0005157,1.00e-06,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96184732766457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,2.04365596629566,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.500763722825999,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.443910671357348,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,7.13520544665411,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@LPHN2 | |||
}} |
Latest revision as of 09:50, 19 September 2015
Short description: | p17@LPHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LPHN2_5end |
Coexpression cluster: | C185_small_adrenal_gastric_Mesenchymal_acute_HES3GFP_testis |
Association with transcript: | 229bp_to_ENST00000469377_5end |
EntrezGene: | LPHN2 |
HGNC: | 18582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 4.01e-13 | 22 |
respiratory tube | 4.01e-13 | 22 |
respiration organ | 4.01e-13 | 22 |
pair of lungs | 4.01e-13 | 22 |
lung primordium | 4.01e-13 | 22 |
lung bud | 4.01e-13 | 22 |
thoracic cavity element | 6.80e-09 | 34 |
thoracic cavity | 6.80e-09 | 34 |
thoracic segment organ | 1.14e-08 | 35 |
epithelial bud | 2.92e-08 | 37 |
respiratory primordium | 4.52e-08 | 38 |
endoderm of foregut | 4.52e-08 | 38 |
epithelial fold | 1.00e-06 | 47 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |