FFCP PHASE1:Hg19::chr1:70671347..70671358,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9295 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10782 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWE6,Q05519 | |||
|association_with_transcript=-6bp_to_ENST00000370951,NM_001190987,NM_004768,uc001des.2,uc001det.2,uc009wbi.2,uc009wbj.1,uc010oqo.1_5end | |||
|cluster_id=chr1:70671347..70671358,+ | |||
|description=CAGE_peak_6_at_SRSF11_5end | |||
|id=chr1:70671347..70671358,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.91e-10!123;UBERON:0000153!1.12e-08!129;UBERON:0007811!1.12e-08!129;UBERON:0000955!1.14e-08!69;UBERON:0006238!1.14e-08!69;UBERON:0000924!1.63e-08!173;UBERON:0006601!1.63e-08!173;UBERON:0001049!3.74e-08!57;UBERON:0005068!3.74e-08!57;UBERON:0006241!3.74e-08!57;UBERON:0007135!3.74e-08!57;UBERON:0004121!5.36e-08!169;UBERON:0001017!6.41e-08!82;UBERON:0002616!7.89e-08!59;UBERON:0002780!2.83e-07!41;UBERON:0001890!2.83e-07!41;UBERON:0006240!2.83e-07!41;UBERON:0002346!3.74e-07!90;UBERON:0005743!4.42e-07!86;UBERON:0003080!7.49e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.28e-09,68;UBERON:0006238,1.28e-09,68;UBERON:0001049,6.02e-09,56;UBERON:0005068,6.02e-09,56;UBERON:0006241,6.02e-09,56;UBERON:0007135,6.02e-09,56;UBERON:0004121,6.64e-09,171;UBERON:0000924,6.64e-09,171;UBERON:0006601,6.64e-09,171;UBERON:0000073,8.25e-09,53;UBERON:0002616,8.25e-09,53;UBERON:0001017,1.54e-08,81;UBERON:0010371,6.73e-08,104;UBERON:0010314,6.81e-08,132;UBERON:0001016,1.83e-07,89;UBERON:0002780,2.06e-07,41;UBERON:0001890,2.06e-07,41;UBERON:0003080,2.06e-07,41;UBERON:0006240,2.06e-07,41;UBERON:0002346,4.19e-07,86 | |||
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| |||
|short_description=p6@SRSF11 | |||
}} |
Latest revision as of 03:51, 19 September 2015
Short description: | p6@SRSF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SRSF11_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000370951, NM_001190987, NM_004768, uc001des.2, uc001det.2, uc009wbi.2, uc009wbj.1, uc010oqo.1_5end |
EntrezGene: | SRSF11 |
HGNC: | 10782 |
UniProt: | Q8IWE6Q05519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 1.28e-09 | 68 |
future brain | 1.28e-09 | 68 |
neural tube | 6.02e-09 | 56 |
neural rod | 6.02e-09 | 56 |
future spinal cord | 6.02e-09 | 56 |
neural keel | 6.02e-09 | 56 |
ectoderm-derived structure | 6.64e-09 | 171 |
ectoderm | 6.64e-09 | 171 |
presumptive ectoderm | 6.64e-09 | 171 |
regional part of nervous system | 8.25e-09 | 53 |
regional part of brain | 8.25e-09 | 53 |
central nervous system | 1.54e-08 | 81 |
ecto-epithelium | 6.73e-08 | 104 |
structure with developmental contribution from neural crest | 6.81e-08 | 132 |
nervous system | 1.83e-07 | 89 |
regional part of forebrain | 2.06e-07 | 41 |
forebrain | 2.06e-07 | 41 |
anterior neural tube | 2.06e-07 | 41 |
future forebrain | 2.06e-07 | 41 |
neurectoderm | 4.19e-07 | 86 |