FFCP PHASE1:Hg19::chr1:51985002..51985020,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2060 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3419 | |||
|TSSclassifier=strong | |||
|UniProt=P42566 | |||
|association_with_transcript=-2bp_to_ENST00000371733_5end | |||
|cluster_id=chr1:51985002..51985020,- | |||
|description=CAGE_peak_3_at_EPS15_5end | |||
|id=chr1:51985002..51985020,- | |||
|ontology_enrichment_celltype=CL:0000945!8.32e-08!24;CL:0000826!8.32e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.67e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.80e-07,24;CL:0000826,1.80e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.76e-22!115;UBERON:0000073!4.81e-12!94;UBERON:0001016!4.81e-12!94;UBERON:0001049!4.11e-11!57;UBERON:0005068!4.11e-11!57;UBERON:0006241!4.11e-11!57;UBERON:0007135!4.11e-11!57;UBERON:0005743!1.02e-10!86;UBERON:0002346!1.28e-10!90;UBERON:0002616!1.96e-10!59;UBERON:0000955!2.35e-10!69;UBERON:0006238!2.35e-10!69;UBERON:0001017!5.22e-10!82;UBERON:0003075!9.18e-10!86;UBERON:0007284!9.18e-10!86;UBERON:0003080!2.99e-07!42;UBERON:0000153!3.86e-07!129;UBERON:0007811!3.86e-07!129;UBERON:0002780!6.32e-07!41;UBERON:0001890!6.32e-07!41;UBERON:0006240!6.32e-07!41;UBERON:0000924!7.83e-07!173;UBERON:0006601!7.83e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.65e-07;53!UBERON:0002616;1.65e-07;53!UBERON:0002780;2.12e-07;41!UBERON:0001890;2.12e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.49e-23,114;UBERON:0001049,7.71e-14,56;UBERON:0005068,7.71e-14,56;UBERON:0006241,7.71e-14,56;UBERON:0007135,7.71e-14,56;UBERON:0002346,1.32e-13,86;UBERON:0001016,4.44e-13,89;UBERON:0010314,6.74e-13,132;UBERON:0003075,7.45e-13,82;UBERON:0007284,7.45e-13,82;UBERON:0000073,5.00e-12,53;UBERON:0002616,5.00e-12,53;UBERON:0000955,1.30e-11,68;UBERON:0006238,1.30e-11,68;UBERON:0001017,2.40e-11,81;UBERON:0002780,2.09e-09,41;UBERON:0001890,2.09e-09,41;UBERON:0003080,2.09e-09,41;UBERON:0006240,2.09e-09,41;UBERON:0010371,3.16e-08,104;UBERON:0003528,5.57e-08,34;UBERON:0002020,5.57e-08,34;UBERON:0001893,8.31e-08,34;UBERON:0003056,8.49e-08,61;UBERON:0004121,1.10e-07,171;UBERON:0000924,1.10e-07,171;UBERON:0006601,1.10e-07,171;UBERON:0002791,5.58e-07,32 | |||
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| |||
|short_description=p3@EPS15 | |||
}} |
Latest revision as of 11:57, 18 September 2015
Short description: | p3@EPS15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPS15_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000371733_5end |
EntrezGene: | EPS15 |
HGNC: | 3419 |
UniProt: | P42566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.80e-07 | 24 |
pro-B cell | 1.80e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.49e-23 | 114 |
neural tube | 7.71e-14 | 56 |
neural rod | 7.71e-14 | 56 |
future spinal cord | 7.71e-14 | 56 |
neural keel | 7.71e-14 | 56 |
neurectoderm | 1.32e-13 | 86 |
nervous system | 4.44e-13 | 89 |
structure with developmental contribution from neural crest | 6.74e-13 | 132 |
neural plate | 7.45e-13 | 82 |
presumptive neural plate | 7.45e-13 | 82 |
regional part of nervous system | 5.00e-12 | 53 |
regional part of brain | 5.00e-12 | 53 |
brain | 1.30e-11 | 68 |
future brain | 1.30e-11 | 68 |
central nervous system | 2.40e-11 | 81 |
regional part of forebrain | 2.09e-09 | 41 |
forebrain | 2.09e-09 | 41 |
anterior neural tube | 2.09e-09 | 41 |
future forebrain | 2.09e-09 | 41 |
ecto-epithelium | 3.16e-08 | 104 |
brain grey matter | 5.57e-08 | 34 |
gray matter | 5.57e-08 | 34 |
telencephalon | 8.31e-08 | 34 |
pre-chordal neural plate | 8.49e-08 | 61 |
ectoderm-derived structure | 1.10e-07 | 171 |
ectoderm | 1.10e-07 | 171 |
presumptive ectoderm | 1.10e-07 | 171 |
regional part of telencephalon | 5.58e-07 | 32 |