FFCP PHASE1:Hg19::chr1:45241534..45241546,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10205 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_000015,uc001cmj.1_5end | |||
|cluster_id=chr1:45241534..45241546,+ | |||
|coexpression_cluster_id=C3174 | |||
|description=CAGE_peak_1_at_SNORD55_5end | |||
|id=chr1:45241534..45241546,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.98e-11!57;UBERON:0005068!1.98e-11!57;UBERON:0006241!1.98e-11!57;UBERON:0007135!1.98e-11!57;UBERON:0007023!1.45e-10!115;UBERON:0003080!2.09e-09!42;UBERON:0002780!2.51e-09!41;UBERON:0001890!2.51e-09!41;UBERON:0006240!2.51e-09!41;UBERON:0002616!8.72e-09!59;UBERON:0000955!5.03e-08!69;UBERON:0006238!5.03e-08!69;UBERON:0001893!1.00e-07!34;UBERON:0002791!1.49e-07!33;UBERON:0002619!2.28e-07!22;UBERON:0001869!2.58e-07!32;UBERON:0002020!3.88e-07!34;UBERON:0003528!3.88e-07!34;UBERON:0001950!5.85e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.95e-08;22!UBERON:0001950;7.52e-08;20!UBERON:0002791;8.67e-08;32!UBERON:0002780;9.82e-08;41!UBERON:0001890;9.82e-08;41!UBERON:0001869;1.49e-07;32!UBERON:0001893;2.47e-07;34!UBERON:0000922;2.82e-07;49!UBERON:0003528;2.88e-07;34!UBERON:0002020;2.88e-07;34!UBERON:0000073;4.03e-07;53!UBERON:0002616;4.03e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.39e-13,56;UBERON:0005068,7.39e-13,56;UBERON:0006241,7.39e-13,56;UBERON:0007135,7.39e-13,56;UBERON:0000073,3.46e-12,53;UBERON:0002616,3.46e-12,53;UBERON:0007023,1.57e-11,114;UBERON:0002780,2.08e-11,41;UBERON:0001890,2.08e-11,41;UBERON:0003080,2.08e-11,41;UBERON:0006240,2.08e-11,41;UBERON:0001893,1.58e-09,34;UBERON:0002791,3.80e-09,32;UBERON:0000955,4.50e-09,68;UBERON:0006238,4.50e-09,68;UBERON:0001869,4.78e-09,32;UBERON:0002619,1.01e-08,22;UBERON:0002346,1.78e-08,86;UBERON:0003528,1.93e-08,34;UBERON:0002020,1.93e-08,34;UBERON:0001950,2.99e-08,20;UBERON:0001017,7.55e-08,81;UBERON:0003075,1.60e-07,82;UBERON:0007284,1.60e-07,82;UBERON:0000956,9.77e-07,25;UBERON:0000203,9.77e-07,25 | |||
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| |||
|short_description=p1@SNORD55 | |||
}} |
Latest revision as of 06:45, 18 September 2015
Short description: | p1@SNORD55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD55_5end |
Coexpression cluster: | C3174_Mesenchymal_acute_Neutrophils_neuroectodermal_cerebellum_CD4_cord |
Association with transcript: | 0bp_to_NR_000015, uc001cmj.1_5end |
EntrezGene: | SNORD55 |
HGNC: | 10205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 7.39e-13 | 56 |
neural rod | 7.39e-13 | 56 |
future spinal cord | 7.39e-13 | 56 |
neural keel | 7.39e-13 | 56 |
regional part of nervous system | 3.46e-12 | 53 |
regional part of brain | 3.46e-12 | 53 |
adult organism | 1.57e-11 | 114 |
regional part of forebrain | 2.08e-11 | 41 |
forebrain | 2.08e-11 | 41 |
anterior neural tube | 2.08e-11 | 41 |
future forebrain | 2.08e-11 | 41 |
telencephalon | 1.58e-09 | 34 |
regional part of telencephalon | 3.80e-09 | 32 |
brain | 4.50e-09 | 68 |
future brain | 4.50e-09 | 68 |
cerebral hemisphere | 4.78e-09 | 32 |
regional part of cerebral cortex | 1.01e-08 | 22 |
neurectoderm | 1.78e-08 | 86 |
brain grey matter | 1.93e-08 | 34 |
gray matter | 1.93e-08 | 34 |
neocortex | 2.99e-08 | 20 |
central nervous system | 7.55e-08 | 81 |
neural plate | 1.60e-07 | 82 |
presumptive neural plate | 1.60e-07 | 82 |
cerebral cortex | 9.77e-07 | 25 |
pallium | 9.77e-07 | 25 |