FFCP PHASE1:Hg19::chr1:33207123..33207145,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57648 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29301 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-340bp_to_ENST00000401073_5end | |||
|cluster_id=chr1:33207123..33207145,+ | |||
|description=CAGE_peak_6_at_KIAA1522_5end | |||
|id=chr1:33207123..33207145,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.02e-43!254;CL:0000076!3.58e-16!62;CL:0000220!6.06e-15!246;CL:0002321!1.49e-14!248;CL:0000213!3.02e-13!57;CL:0000215!3.02e-13!57;CL:0002078!6.51e-11!44;CL:0002076!7.01e-10!43;CL:0002139!1.45e-09!24;CL:0000115!3.53e-09!35;CL:0000071!4.53e-09!18;CL:0002546!4.53e-09!18;CL:0000223!8.43e-09!59;CL:1000497!1.84e-07!18;CL:0002518!1.84e-07!18;CL:1000449!4.37e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.02e-11;18!CL:0002139;9.06e-11;24!CL:0000213;5.00e-10;58!CL:0000215;5.00e-10;58!CL:0002368;1.60e-09;13!CL:0000076;2.08e-09;63!CL:1000497;2.66e-09;17!CL:0002518;2.66e-09;17!CL:1000449;3.38e-09;15!CL:0000115;3.72e-09;36!CL:0002078;1.64e-08;45!CL:1000507;1.76e-08;10!CL:1000494;1.76e-08;10!CL:0002681;6.26e-07;12!CL:0002584;6.26e-07;12!CL:0000066;8.05e-07;253 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.01e-44,253;CL:0000076,1.37e-18,63;CL:0000213,6.81e-15,58;CL:0000215,6.81e-15,58;CL:0002321,3.34e-13,250;CL:0002078,6.58e-13,45;CL:0000115,1.67e-11,36;CL:0000071,1.98e-11,18;CL:0002546,1.98e-11,18;CL:0002139,1.12e-10,24;CL:1000497,1.99e-09,17;CL:0002518,1.99e-09,17;CL:1000449,2.43e-09,15;CL:0002368,2.80e-09,13;CL:1000507,1.29e-08,10;CL:1000494,1.29e-08,10;CL:0002076,3.64e-07,42;CL:0002681,3.69e-07,12;CL:0002584,3.69e-07,12;CL:0000223,4.36e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.02e-11;18 | |||
|ontology_enrichment_disease=DOID:305!4.81e-11!106;DOID:0050687!8.10e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.92e-14!169;UBERON:0000925!1.92e-14!169;UBERON:0006595!1.92e-14!169;UBERON:0001008!6.45e-11!45;UBERON:0006554!1.33e-10!44;UBERON:0001007!1.34e-10!155;UBERON:0001555!1.34e-10!155;UBERON:0007026!1.34e-10!155;UBERON:0000487!1.83e-10!22;UBERON:0000466!1.95e-09!126;UBERON:0005177!2.20e-09!107;UBERON:0006914!2.42e-09!25;UBERON:0001986!4.53e-09!18;UBERON:0004638!4.53e-09!18;UBERON:0004852!4.53e-09!18;UBERON:0003064!6.03e-09!37;UBERON:0000464!1.45e-08!104;UBERON:0000058!5.18e-08!26;UBERON:0002113!7.85e-08!27;UBERON:0003918!7.85e-08!27;UBERON:0005095!7.85e-08!27;UBERON:0007687!7.85e-08!27;UBERON:0000077!7.94e-08!130;UBERON:0004876!1.76e-07!20;UBERON:0000467!2.58e-07!625;UBERON:0006555!2.90e-07!17;UBERON:0005103!2.90e-07!17;UBERON:0000083!2.90e-07!17;UBERON:0009201!2.90e-07!17;UBERON:0004819!2.90e-07!17;UBERON:0006553!2.90e-07!17;UBERON:0003074!2.90e-07!17;UBERON:0003060!2.90e-07!17;UBERON:0005172!3.57e-07!55;UBERON:0005173!3.57e-07!55;UBERON:0000480!3.86e-07!626;UBERON:0004211!4.37e-07!16;UBERON:0001285!4.37e-07!16;UBERON:0007684!4.37e-07!16;UBERON:0003220!4.37e-07!16;UBERON:0004208!4.37e-07!16;UBERON:0000080!4.90e-07!18;UBERON:0002120!4.90e-07!18;UBERON:0004875!4.90e-07!18;UBERON:0005721!4.90e-07!18;UBERON:0005754!4.90e-07!18;UBERON:0007297!4.90e-07!18;UBERON:0004921!5.09e-07!129;UBERON:0004185!5.09e-07!129;UBERON:0000489!6.13e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;3.39e-14;22!UBERON:0004638;1.02e-11;18!UBERON:0001986;1.02e-11;18!UBERON:0004852;1.02e-11;18!UBERON:0006914;1.13e-11;25!UBERON:0006554;4.82e-11;30!UBERON:0001008;4.82e-11;30!UBERON:0000490;6.70e-10;33!UBERON:0006555;3.38e-09;15!UBERON:0004819;3.38e-09;15!UBERON:0001285;3.38e-09;15!UBERON:0007684;3.38e-09;15!UBERON:0004211;1.76e-08;10!UBERON:0009773;1.76e-08;10!UBERON:0001231;1.76e-08;10!UBERON:0004810;1.76e-08;10!UBERON:0002113;4.09e-08;24!UBERON:0011143;4.09e-08;24!UBERON:0001225;6.26e-07;12!UBERON:0008987;6.26e-07;12!UBERON:0000489;6.94e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,1.10e-13,22;UBERON:0004638,1.98e-11,18;UBERON:0001986,1.98e-11,18;UBERON:0004852,1.98e-11,18;UBERON:0006914,3.02e-11,25;UBERON:0001008,3.71e-11,48;UBERON:0006554,1.04e-10,47;UBERON:0006555,1.24e-09,16;UBERON:0004819,1.24e-09,16;UBERON:0004211,2.43e-09,15;UBERON:0009773,2.43e-09,15;UBERON:0001231,2.43e-09,15;UBERON:0001285,2.43e-09,15;UBERON:0007684,2.43e-09,15;UBERON:0004208,2.43e-09,15;UBERON:0005177,6.67e-09,101;UBERON:0004810,1.29e-08,10;UBERON:0002113,2.64e-08,26;UBERON:0003918,2.64e-08,26;UBERON:0011143,2.64e-08,26;UBERON:0005095,2.64e-08,26;UBERON:0007687,2.64e-08,26;UBERON:0004119,8.82e-08,160;UBERON:0000925,8.82e-08,160;UBERON:0006595,8.82e-08,160;UBERON:0001225,3.69e-07,12;UBERON:0008987,3.69e-07,12;UBERON:0000489,4.05e-07,31;UBERON:0005910,6.43e-07,6 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,1.72013755551056,2.79120467188971,2.62129646556207,2.90143676051299,0.37129905888014,0.662794751455832,0,1.80808358407193,0.730310090387373,1.95173119516203,0.123121058076788,0.204000691244253,0,0.572471974262113,1.50561867580173,1.00434111675842,0,0,0,0,0,0.154816123316076,0,2.409647350226,1.10926203050036,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0.464858073811369,0,0,0,0,0,0,0,0,0.188242339542605,0,0.449446968890169,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.00535164254356,0.724232594804119,0,0.486634870302636,0.0945348171640679,0,0,0.458426764241994,2.18577172975525,1.11235332835329,0,0.348259474598534,1.06366368415092,0,0,0.371457501329565,4.77029777680092,3.4409383804245,4.51282652089873,1.69592382577203,2.09749718104953,0.825354125820202,1.04497483268405,1.29208379584664,0.71153252537342,0.33472061276467,3.22263453687318,1.52054421143703,7.07779966889692,1.10298924103761,0.81014194788176,1.07159673940896,2.46982309888787,1.46394924628319,1.53316637465883,3.79706263827252,2.01521918323448,0,0,3.05265836499774,0.993943903390637,0,0.264818361626438,0.573673241497627,1.41867352879343,0.560677600142307,1.06748995729705,0.98667019366864,0.622422070799533,0.404132016209064,0,0.302714855289863,0,0,0,0.570471821544449,0,0.117434498643765,0.485618833104395,0.561803226808994,0.408308342509787,0.122834317311768,1.65321249881225,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.500474079487857,1.10825646193673,0.877955241761676,0.30648779579902,0.45071417671979,0,0.179389635688862,0.427114777637135,0.211931901159562,0,0.618315175430633,0.257640540045629,0.558350568994769,0,0.292311015483596,0,0.828449087780694,0.646584227275248,0,0.403008392910561,1.18692414617341,3.47869535693934,2.45471508531751,2.86804595389004,0.243947412259191,0,0.116193942869518,0.518305275076852,0.252320850875628,0,0,1.28648187638577,0,0,0.721879481669586,0.591534000199219,1.34867752062481,0.723033089650446,1.21323370005633,0.217879444092406,1.18635309555548,0.808987848960987,0.196221465125346,1.15424147083917,0,2.80483547606892,0.8231480226628,0,0,0,0,0,0.860919069801795,0.343135620597051,2.30475599358114,0,2.11110842064425,2.12953423864618,0.651616610620649,1.03993478527958,0,0.115930404975077,0.117408694235822,1.73239737313289,0.462985512576611,1.33177906564219,0.790204397959275,0,0.738651018262192,0.234004265139238,0,2.81201501960331,3.02367830757947,1.70130116690864,0.268675568108545,0.581267877027924,2.30029607499127,0,1.76096868026452,1.4512968087854,2.73827911492227,3.53478813593864,0.571481048629521,3.05590740446622,1.17217447210047,1.71072446022705,0.616964956219941,1.20137223137567,1.14330573052231,0.336393253036082,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,2.1100756394171,1.74306691720059,2.29937879718731,0,0,0,0.718874566474748,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,1.2269149171914,0.500170521059677,0.271265023699736,1.03985430765404,1.07057393278297,0.315404830067869,2.22568688486155,0.902838299183157,0,0,0.664225598535437,0.184369168541703,1.04260337361699,0.587403472388222,0.343143423810856,0,0.215714200818617,0.106727557803444,1.21251028578504,6.65741758041988,3.32629322662648,0.496215615637554,0.153461973288062,0,0,0.511707249066704,0,1.48418066444991,0.308419387605311,0,0.492762936082855,0.519254429183621,0.116210378459959,0.966875596732978,2.40607764363942,0.552485933615378,0.68888668898764,0.182091168006717,0.262248829918848,1.35359883872224,1.5403067420883,3.92174884588428,2.92278449306521,1.05551628892876,2.27466768141793,0.680374821106063,0.431831832204279,3.08454505380579,2.16757150035082,2.00675909541941,1.78413391131527,1.66215201785745,2.0148727924996,0,0,0,1.64007322849853,0,0.412164046590889,1.64825036673018,1.56768049849117,5.74265537996172,1.30012049207304,3.21367859688319,1.06337790121334,0,0.307007349452259,0.413509717453592,0.107420244868274,0.290033387828457,0.0852266274161009,0.623224249527161,1.65284915360978,4.80475168412765,4.08360679982669,2.93357564481095,0,0,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0,0,0,0.953150969619124,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0.54907405947211,0.235624804691373,0.202182481573316,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.136499911407986,0.282810863907425,0,1.10273068709225,0.66343897524122,0,0,0.655894752046633,0,0.6196469961995,0,0,0.196498082026242,0,0.354761064070598,0.422215270595328,0.329294892959902,1.51789269506286,2.44954304171488,2.02066436723575,3.35151137767894,2.17781969722645,0.470719003883896,2.15252686335615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| |||
|short_description=p6@KIAA1522 | |||
}} |
Latest revision as of 15:45, 17 September 2015
Short description: | p6@KIAA1522 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KIAA1522_5end |
Coexpression cluster: | NA |
Association with transcript: | -340bp_to_ENST00000401073_5end |
EntrezGene: | KIAA1522 |
HGNC: | 29301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.01e-44 | 253 |
squamous epithelial cell | 1.37e-18 | 63 |
lining cell | 6.81e-15 | 58 |
barrier cell | 6.81e-15 | 58 |
embryonic cell | 3.34e-13 | 250 |
meso-epithelial cell | 6.58e-13 | 45 |
endothelial cell | 1.67e-11 | 36 |
blood vessel endothelial cell | 1.98e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.98e-11 | 18 |
endothelial cell of vascular tree | 1.12e-10 | 24 |
kidney cell | 1.99e-09 | 17 |
kidney epithelial cell | 1.99e-09 | 17 |
epithelial cell of nephron | 2.43e-09 | 15 |
respiratory epithelial cell | 2.80e-09 | 13 |
kidney tubule cell | 1.29e-08 | 10 |
nephron tubule epithelial cell | 1.29e-08 | 10 |
endo-epithelial cell | 3.64e-07 | 42 |
kidney cortical cell | 3.69e-07 | 12 |
renal cortical epithelial cell | 3.69e-07 | 12 |
endodermal cell | 4.36e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 1.10e-13 | 22 |
blood vessel endothelium | 1.98e-11 | 18 |
endothelium | 1.98e-11 | 18 |
cardiovascular system endothelium | 1.98e-11 | 18 |
squamous epithelium | 3.02e-11 | 25 |
renal system | 3.71e-11 | 48 |
urinary system structure | 1.04e-10 | 47 |
excretory tube | 1.24e-09 | 16 |
kidney epithelium | 1.24e-09 | 16 |
nephron epithelium | 2.43e-09 | 15 |
renal tubule | 2.43e-09 | 15 |
nephron tubule | 2.43e-09 | 15 |
nephron | 2.43e-09 | 15 |
uriniferous tubule | 2.43e-09 | 15 |
nephrogenic mesenchyme | 2.43e-09 | 15 |
trunk region element | 6.67e-09 | 101 |
nephron tubule epithelium | 1.29e-08 | 10 |
kidney | 2.64e-08 | 26 |
kidney mesenchyme | 2.64e-08 | 26 |
upper urinary tract | 2.64e-08 | 26 |
kidney rudiment | 2.64e-08 | 26 |
kidney field | 2.64e-08 | 26 |
endoderm-derived structure | 8.82e-08 | 160 |
endoderm | 8.82e-08 | 160 |
presumptive endoderm | 8.82e-08 | 160 |
cortex of kidney | 3.69e-07 | 12 |
renal parenchyma | 3.69e-07 | 12 |
cavitated compound organ | 4.05e-07 | 31 |
transitional epithelium | 6.43e-07 | 6 |