FFCP PHASE1:Hg19::chr1:29241128..29241159,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3377 | |||
|TSSclassifier=strong | |||
|UniProt=P11171,Q4VB86 | |||
|association_with_transcript=37bp_to_ENST00000373797,uc001brk.2,uc001brl.1,uc009vtk.1_5end | |||
|cluster_id=chr1:29241128..29241159,+ | |||
|coexpression_cluster_id=C3965 | |||
|description=CAGE_peak_3_at_EPB41_5end | |||
|id=chr1:29241128..29241159,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.90e-14!53;CL:0000051!5.90e-14!53;CL:0000838!1.29e-13!52;CL:0000037!1.41e-13!172;CL:0000566!1.41e-13!172;CL:0000988!2.20e-12!182;CL:0000791!3.75e-12!18;CL:0000789!3.75e-12!18;CL:0002420!3.75e-12!18;CL:0002419!3.75e-12!18;CL:0000790!3.75e-12!18;CL:0002032!1.18e-11!165;CL:0000837!1.18e-11!165;CL:0000084!6.10e-10!25;CL:0000827!6.10e-10!25;CL:0000738!2.84e-08!140;CL:0000625!5.34e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.49e-15;18!CL:0000789;7.49e-15;18!CL:0002419;7.49e-15;18!CL:0000084;7.13e-12;25!CL:0000625;1.17e-09;11!CL:0000542;3.39e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.42e-15,53;CL:0000051,4.42e-15,53;CL:0000791,7.46e-15,18;CL:0000789,7.46e-15,18;CL:0002420,7.46e-15,18;CL:0002419,7.46e-15,18;CL:0000790,7.46e-15,18;CL:0000838,1.15e-14,52;CL:0000084,6.82e-12,25;CL:0000827,6.82e-12,25;CL:0000037,2.77e-11,168;CL:0000988,1.15e-10,177;CL:0000625,1.21e-09,11;CL:0002032,2.82e-09,161;CL:0000837,2.82e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;7.49e-15;18!CL:0000051;3.39e-09;53 | |||
|ontology_enrichment_disease=DOID:3095!1.05e-07!22;DOID:2994!1.05e-07!22;DOID:1240!5.27e-07!39;DOID:2531!6.19e-07!51;DOID:0060083!6.19e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.39e-08;22!DOID:2994;4.39e-08;22!DOID:1240;7.43e-07;39!DOID:8692;9.36e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.99e-08,22;DOID:2994,2.99e-08,22;DOID:1240,3.54e-08,39;DOID:2531,1.70e-07,51;DOID:0060083,1.70e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.49e-08!94;UBERON:0001016!9.49e-08!94;UBERON:0001017!1.29e-07!82;UBERON:0000178!2.31e-07!15;UBERON:0000179!2.31e-07!15;UBERON:0000463!2.31e-07!15;UBERON:0005743!2.75e-07!86;UBERON:0007023!5.16e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-08;15!UBERON:0000179;1.40e-08;15!UBERON:0000463;1.40e-08;15!UBERON:0000922;3.22e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.55e-09,15;UBERON:0000179,7.55e-09,15;UBERON:0000463,7.55e-09,15 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,1.04474251279935,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,1.47745269692145,0.612002073732759,0.626909442956176,2.28988789704845,2.05311637609326,3.13856598987007,0.840547463227464,1.23150884174919,0.629686250509434,15.3412067971073,20.7267874972495,4.18003532953405,0,0,0,1.31694240986513,0.710846162437108,1.76160263600908,3.32397245119126,4.8130667392834,5.859293509328,2.01523926815932,3.56283032620878,2.31818010870768,0.581592955118259,2.26725566213286,0.727752183563449,0.232429036905685,0.411167888021826,0.929119112685311,0,1.0246428261164,0.945928919554341,0,1.93645405075148,1.35426486594342,0.564727018627814,1.36453075028923,0.674170453335254,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,0,0.56738522469114,1.24564449799115,0.502497330513487,0,0.217188844705117,4.23779651843358,1.84138817993782,0,0.211255286311942,0.425208599930087,0.628975936525128,0.561643155732475,0.450530678524519,0.964353520182481,0.285012743741249,0,0,7.03984977845291,4.36910889009705,5.33705552318133,5.12076267079809,8.00791974072025,4.02326707968138,5.94940385506376,0.954053754535364,10.8150464130795,8.22132065119314,8.41001101875504,7.93027971474155,6.1655941927969,2.10707267820062,24.1953017240015,16.8994627982141,25.0833828779401,24.5764148224297,23.4664031976185,20.3582556465935,31.1722765452658,17.3800312740871,25.9253198577857,32.1224147146251,49.2863032052328,20.110337196931,18.208308658383,16.4437904603676,10.5013006758622,14.7799573724877,18.6841069584196,31.0347360584067,41.8142095219907,15.2967612641714,16.8617017184845,17.8686271650968,27.8321661221453,22.936709831335,18.8814201618361,12.3558765778289,21.5322420281215,28.157054453972,32.4819889036099,20.5996209278295,18.064815932263,21.1687080385969,21.1277754668971,24.1856754484274,0,0.670700859703636,0.12786256184353,0,0,0,0,0.486634870302636,0.567208902984407,0.443458794925128,0.702678285545008,1.30979075497713,0,0,0.324547393654683,0.174129737299267,0,1.66943437013739,2.85997455390064,2.97166001063652,1.39133685156694,0,0.347140501607594,0.56530794192401,0,1.10047216776027,0.835979866147242,0.516833518338658,0.35576626268671,1.00416183829401,0,1.52054421143703,0.732186172644509,0.735326160691737,0,0.892997282840798,0.898117490504679,1.23872628531654,0,0.949265659568129,0.366403487860815,10.5424333948851,3.87780264148325,0,0,0,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0.570471821544449,0,0.939475989150119,0.809364721840658,0.842704840213491,0.408308342509787,0.245668634623536,0.206651562351531,0,0,0,0,0.841680569770331,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0.717558542755448,0,0,0.600182192168805,0.824420233907511,0,0.18611685633159,0,0,1.51460264546469,0.0920498986422993,0.484938170456436,0,0.10075209822764,0.169560592310488,0,0,0,11.0996072577932,14.1806852103989,9.29551542956147,13.2686150419674,6.30802127189071,12.4092302085782,0,0,0,0,0,0.591534000199219,0.337169380156203,0.482022059766964,0.330881918197182,0.871517776369625,0.949082476444386,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0,0.590789906681404,14.5682822806835,0.983907508344908,0,0,0,0,0,0.325808305310325,0,0,2.55046890945169,0.352226082707465,0.866198686566443,0,0.570762456703795,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0,0.50496973370552,1.77794104018073,0.381988425558278,1.17217447210047,0,0.719792448923265,0,0.857479297891735,0.224262168690721,2.1798003441664,0.2933531432838,0.387815147273333,0,1.690605505112,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,21.1840922147767,20.8852605814043,20.9158747613732,19.1231124056825,1.77866236955724,5.20559415430487,7.73288812777695,5.52803675603351,8.29320377149112,11.2351053592077,8.97484377612075,11.603634376209,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,2.65690239414175,0.368738337083406,0.260650843404249,0,0.686286847621712,22.3309468212718,14.2371372540287,18.0369572687821,0.303127571446259,0,0.907170879989041,0.248107807818777,0.153461973288062,0.280660094433074,0.512556597022804,0,0.160853921143607,0,0,0,0.328508624055237,0,0.232420756919918,3.14234568938218,0,0.0920809889358963,0.34444334449382,0.182091168006717,0,0,0.231046011313244,0,1.46139224653261,0.105551628892876,0,0.340187410553031,0.431831832204279,1.54227252690289,0,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0.261435451024901,0.256450125116389,0,0.650756789328606,0.824328093181778,6.13515414282901,7.01330749324998,0,0,0,0.386682873168488,0.462145851343933,0.460511024178389,0,0.214840489736547,0.290033387828457,0.340906509664404,0.623224249527161,0,0,0.127612712494584,0,0,0,0,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| |||
|short_description=p3@EPB41 | |||
}} |
Latest revision as of 11:11, 17 September 2015
Short description: | p3@EPB41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPB41_5end |
Coexpression cluster: | C3965_cerebellum_CD4_pineal_small_merkel_Neutrophils_CD8 |
Association with transcript: | 37bp_to_ENST00000373797, uc001brk.2, uc001brl.1, uc009vtk.1_5end |
EntrezGene: | EPB41 |
HGNC: | 3377 |
UniProt: | P11171Q4VB86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.42e-15 | 53 |
common lymphoid progenitor | 4.42e-15 | 53 |
mature alpha-beta T cell | 7.46e-15 | 18 |
alpha-beta T cell | 7.46e-15 | 18 |
immature T cell | 7.46e-15 | 18 |
mature T cell | 7.46e-15 | 18 |
immature alpha-beta T cell | 7.46e-15 | 18 |
lymphoid lineage restricted progenitor cell | 1.15e-14 | 52 |
T cell | 6.82e-12 | 25 |
pro-T cell | 6.82e-12 | 25 |
hematopoietic stem cell | 2.77e-11 | 168 |
hematopoietic cell | 1.15e-10 | 177 |
CD8-positive, alpha-beta T cell | 1.21e-09 | 11 |
hematopoietic oligopotent progenitor cell | 2.82e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.82e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 7.55e-09 | 15 |
haemolymphatic fluid | 7.55e-09 | 15 |
organism substance | 7.55e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.99e-08 | 22 |
germ cell cancer | 2.99e-08 | 22 |
leukemia | 3.54e-08 | 39 |
hematologic cancer | 1.70e-07 | 51 |
immune system cancer | 1.70e-07 | 51 |