FFCP PHASE1:Hg19::chr1:2487800..2487845,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |||
|TSSclassifier=strong | |||
|UniProt=Q92956,B4DU65,F8WAX0 | |||
|association_with_transcript=0bp_to_ENST00000355716,ENST00000423768,ENST00000442392,ENST00000475523,ENST00000482074,NM_003820,uc001ajr.2,uc001ajs.2,uc001ajt.1,uc009vlf.1,uc010nzc.1_5end | |||
|cluster_id=chr1:2487800..2487845,+ | |||
|description=CAGE_peak_2_at_TNFRSF14_5end | |||
|id=chr1:2487800..2487845,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.88e-19!76;CL:0002057!1.08e-16!42;CL:0000557!2.79e-16!71;CL:0000839!4.49e-16!70;CL:0002009!1.52e-15!65;CL:0002194!4.55e-15!63;CL:0000576!4.55e-15!63;CL:0000040!4.55e-15!63;CL:0000559!4.55e-15!63;CL:0000738!1.23e-13!140;CL:0000860!3.07e-13!45;CL:0002031!1.23e-11!124;CL:0002087!1.01e-10!119;CL:0000763!1.83e-09!112;CL:0000049!1.83e-09!112;CL:0000988!3.30e-08!182;CL:0000115!6.98e-08!35;CL:0002032!7.85e-08!165;CL:0000837!7.85e-08!165;CL:0000037!9.52e-08!172;CL:0000566!9.52e-08!172 | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.00e-14;39!CL:0000234;9.00e-14;39!CL:0000860;1.14e-12;33!CL:0002057;1.14e-12;33!CL:0000576;1.19e-10;48!CL:0000766;1.25e-10;69!CL:0000115;3.23e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.09e-22,72;CL:0000473,2.43e-20,48;CL:0000234,2.43e-20,48;CL:0000557,2.80e-19,67;CL:0000839,4.48e-19,66;CL:0002009,1.25e-18,61;CL:0002194,3.75e-18,59;CL:0000576,3.75e-18,59;CL:0000040,3.75e-18,59;CL:0000559,3.75e-18,59;CL:0000860,1.01e-16,42;CL:0002057,1.01e-16,42;CL:0000738,2.81e-15,136;CL:0002031,3.18e-13,120;CL:0002087,2.91e-12,115;CL:0000763,7.34e-11,108;CL:0000049,7.34e-11,108;CL:0000988,7.26e-09,177;CL:0002032,9.41e-09,161;CL:0000837,9.41e-09,161;CL:0000037,1.21e-08,168;CL:0000115,2.98e-08,36 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.71e-25!112;UBERON:0002390!1.19e-21!102;UBERON:0003061!1.19e-21!102;UBERON:0002405!1.34e-18!115;UBERON:0002371!4.47e-16!80;UBERON:0003081!1.02e-13!216;UBERON:0001474!3.42e-13!86;UBERON:0004765!1.30e-11!101;UBERON:0001434!1.30e-11!101;UBERON:0007023!5.52e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.92e-28,108;UBERON:0002390,1.64e-24,98;UBERON:0003061,1.64e-24,98;UBERON:0002405,1.90e-22,93;UBERON:0002371,8.07e-19,76;UBERON:0003081,1.39e-17,203;UBERON:0001474,1.84e-15,82;UBERON:0004765,4.39e-14,90;UBERON:0001434,1.67e-13,100;UBERON:0000926,4.77e-10,315;UBERON:0004120,4.77e-10,315;UBERON:0006603,4.77e-10,315;UBERON:0002204,2.26e-07,167;UBERON:0007023,6.31e-07,114 | |||
|phase1_expression=7.81217030863394,7.06531728840244,2.53717927372748,13.009528785907,9.83314407740033,11.3404008133048,2.53299878168311,4.42203911398782,8.09675447419499,2.21160542851358,12.5604210235037,1.96597234917155,2.63766978228454,3.96052329472149,8.28493439319789,7.39557661096953,2.41077811209591,3.65155045193687,5.36726078669558,1.96993692922861,2.24400760368678,1.25381888591235,1.14494394852423,0.410623275218653,0.627713197974014,9.32243550125005,7.38905305049512,5.66717625458491,14.1611139665605,8.06041736004147,19.9712799077738,10.1136334692682,9.638589400904,10.7228662948368,1.31694240986513,7.96147701929561,9.9824149373848,26.0377842009982,29.4800337781108,19.9650001058584,55.0832066630214,48.260156236828,49.9696601210322,21.0827446230369,27.9628198329719,22.8029017516547,35.7940716834754,35.360438369877,42.7394791835243,20.1384674625505,20.2366958157989,12.7700404139836,33.440331031452,29.0468107612722,35.2108865145289,27.1068968941351,39.0255794582719,19.1014961778322,22.3441241430759,24.069677030707,25.5734850319616,17.8119702100827,16.5554835825954,8.09827026012119,20.895065181258,26.6671055604836,23.0444232128363,20.6023905510529,27.6385946762707,14.3344637505377,33.9023721474687,19.1504370713534,16.7725065343669,18.8017204817628,24.44949449598,14.8857638310947,32.1259885078976,30.9364399253503,22.5015821375912,22.2309940118174,24.0689179410899,14.0651398398768,7.03984977845291,7.64594055766984,10.6741110463627,8.10787422876364,6.4063357925762,4.59801951963587,5.94940385506376,5.72432252721218,16.507176104174,8.80855784056408,17.2022952656353,10.5737062863221,14.5732226375199,5.79444986505169,4.91774425284583,6.6811829667358,8.22405995998037,16.0499035575051,11.0813570655421,8.04861269749047,13.6378709885538,14.3719489381874,9.42738903919479,7.97522020501036,6.77009659412539,16.3956889248864,20.289258219341,19.2392348386301,28.7404018497282,19.4168067442485,12.0112116161269,13.1095005763959,12.5442628565972,13.0305744102201,5.3650869104269,6.8725489096526,5.81945291644857,5.09704662918555,6.51083453856419,4.75226022224187,9.33565738282191,6.91127700233859,8.74515085866421,7.10331756132051,6.56902397536837,4.83856183739358,5.61624411145365,4.34473211648397,21.9426179682566,10.0605128955545,1.66221330396589,11.5660528763061,14.5387994084408,15.9331170856906,7.15757352345989,13.1391414981712,1.22895262313288,2.21729397462564,1.40535657109002,14.3422087669995,14.2075162434091,12.6066710546706,13.6309905334967,13.4079897720436,25.9268023011787,2.38490624305342,2.28797964312051,2.60020250930695,10.3356451830687,11.1830497363796,14.9270415691266,11.3061588384802,19.2969740656557,13.2056660131232,10.0317583937669,27.1337597127795,25.9709371761298,22.0915604424682,51.96498190708,22.8081631715554,61.2595764445906,14.7065232138347,13.7724131139899,12.5019619597712,14.8189385933272,9.45936436059907,1.53316637465883,10.4419222552494,12.2745168433373,38.2163210564583,34.9002237733493,10.0301631992783,5.4666914686485,2.91250176828533,17.7428302289713,23.5206029014027,4.25602058638028,2.80338800071154,1.06748995729705,1.72667283892012,6.22422070799533,4.04132016209064,1.63461903113459,2.4217188423189,1.72852777344,2.10889288650417,4.37024107562449,3.99330275081114,6.27684458317565,1.40921398372518,1.78060238804945,1.12360645361799,6.53293348015658,2.45668634623536,12.6057453034434,19.0080457165129,18.0504858373347,10.0117749813183,22.9957805381196,2.52504170931099,1.62654075833553,5.54128230968366,9.2185300384976,16.5503409731471,14.2726155961267,1.02088964844019,15.606898304931,5.97960688691989,7.41761654058466,13.5040993237981,5.87399416659102,26.2793350846542,9.30584281657949,11.4767905924061,4.38466523225394,20.1947019395292,8.83679026966074,17.9427123068881,8.87523981291536,2.92181084860157,4.40857540007268,11.7889120429611,6.81865301477087,9.46455164783713,0,0,0.116193942869518,0.207322110030741,0,0,9.38697193978896,18.6539872075937,20.7202382028721,13.9310378409594,14.4375896333917,1.65629520055781,2.19160097101532,1.92808823906786,1.54411561825352,1.96091499683166,2.60997681022206,1.61797569792197,2.15843611637881,0.38474715694639,25.097285457238,7.01208869017229,6.5851841813024,10.2906097969879,45.6318125358591,22.6050259835854,31.3118650541144,2.6487785964879,6.14942192715568,1.71567810298526,5.04851312879678,7.86812272803337,5.5290934826397,3.51836091602412,4.56131627434455,8.31947828223663,1.44331342025273,2.43453850447661,0.939269553886573,25.6972277014711,31.0200293426329,28.1576145307205,0,0,54.6601753514022,32.526592854354,35.6714789492948,2.81201501960331,6.38332087155666,4.11147782002921,8.41850113406774,9.30028603244678,14.568541808278,2.46331618947972,20.3391882570552,86.2484960649612,85.7513722830921,74.2305508547114,34.6063523892321,46.2205994925516,98.4626556564395,78.6933251704444,43.5988569062092,140.260208013109,111.472308725926,1.68196626518041,1.30788020649984,1.0267360014933,2.45616259939778,75.1078536288953,5.071816515336,16.7541013448468,16.6411899058186,4.37252536245642,7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| |||
|short_description=p2@TNFRSF14 | |||
}} |
Latest revision as of 00:59, 17 September 2015
Short description: | p2@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF14_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355716, ENST00000423768, ENST00000442392, ENST00000475523, ENST00000482074, NM_003820, uc001ajr.2, uc001ajs.2, uc001ajt.1, uc009vlf.1, uc010nzc.1_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | Q92956B4DU65F8WAX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.09e-22 | 72 |
defensive cell | 2.43e-20 | 48 |
phagocyte | 2.43e-20 | 48 |
granulocyte monocyte progenitor cell | 2.80e-19 | 67 |
myeloid lineage restricted progenitor cell | 4.48e-19 | 66 |
macrophage dendritic cell progenitor | 1.25e-18 | 61 |
monopoietic cell | 3.75e-18 | 59 |
monocyte | 3.75e-18 | 59 |
monoblast | 3.75e-18 | 59 |
promonocyte | 3.75e-18 | 59 |
classical monocyte | 1.01e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-16 | 42 |
leukocyte | 2.81e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 3.18e-13 | 120 |
nongranular leukocyte | 2.91e-12 | 115 |
myeloid cell | 7.34e-11 | 108 |
common myeloid progenitor | 7.34e-11 | 108 |
hematopoietic cell | 7.26e-09 | 177 |
hematopoietic oligopotent progenitor cell | 9.41e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.41e-09 | 161 |
hematopoietic stem cell | 1.21e-08 | 168 |
endothelial cell | 2.98e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.92e-28 | 108 |
hematopoietic system | 1.64e-24 | 98 |
blood island | 1.64e-24 | 98 |
immune system | 1.90e-22 | 93 |
bone marrow | 8.07e-19 | 76 |
lateral plate mesoderm | 1.39e-17 | 203 |
bone element | 1.84e-15 | 82 |
skeletal element | 4.39e-14 | 90 |
skeletal system | 1.67e-13 | 100 |
mesoderm | 4.77e-10 | 315 |
mesoderm-derived structure | 4.77e-10 | 315 |
presumptive mesoderm | 4.77e-10 | 315 |
musculoskeletal system | 2.26e-07 | 167 |
adult organism | 6.31e-07 | 114 |