FFCP PHASE1:Hg19::chr1:214454492..214454576,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56950 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20982 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NRG4 | |||
|association_with_transcript=0bp_to_ENST00000366957,ENST00000415093,ENST00000460580,NM_020197,uc009xdj.2,uc009xdl.1,uc010ptw.1,uc010ptx.1_5end | |||
|cluster_id=chr1:214454492..214454576,+ | |||
|description=CAGE_peak_1_at_SMYD2_5end | |||
|id=chr1:214454492..214454576,+ | |||
|ontology_enrichment_celltype=CL:0000791!9.76e-08!18;CL:0000789!9.76e-08!18;CL:0002420!9.76e-08!18;CL:0002419!9.76e-08!18;CL:0000790!9.76e-08!18;CL:0000084!1.11e-07!25;CL:0000827!1.11e-07!25;CL:0000542!7.93e-07!53;CL:0000051!7.93e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.00e-07;18!CL:0000789;1.00e-07;18!CL:0002419;1.00e-07;18!CL:0000084;1.05e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.76e-08,18;CL:0000789,9.76e-08,18;CL:0002420,9.76e-08,18;CL:0002419,9.76e-08,18;CL:0000790,9.76e-08,18;CL:0000084,1.11e-07,25;CL:0000827,1.11e-07,25;CL:0000542,7.93e-07,53;CL:0000051,7.93e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.00e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@SMYD2 | |||
}} |
Latest revision as of 01:45, 25 September 2015
Short description: | p1@SMYD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMYD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000366957, ENST00000415093, ENST00000460580, NM_020197, uc009xdj.2, uc009xdl.1, uc010ptw.1, uc010ptx.1_5end |
EntrezGene: | SMYD2 |
HGNC: | 20982 |
UniProt: | Q9NRG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.76e-08 | 18 |
alpha-beta T cell | 9.76e-08 | 18 |
immature T cell | 9.76e-08 | 18 |
mature T cell | 9.76e-08 | 18 |
immature alpha-beta T cell | 9.76e-08 | 18 |
T cell | 1.11e-07 | 25 |
pro-T cell | 1.11e-07 | 25 |
lymphocyte | 7.93e-07 | 53 |
common lymphoid progenitor | 7.93e-07 | 53 |