FFCP PHASE1:Hg19::chr9:102584278..102584285,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:102584278..102584285,+
|short_description=p5@NR4A3
|description=CAGE_peak_5_at_NR4A3_5end
|association_with_transcript=123bp_to_ENST00000395096_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8013 | |EntrezGene=8013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7982 | |HGNC=7982 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBS2 | |UniProt=E9PBS2 | ||
|association_with_transcript=123bp_to_ENST00000395096_5end | |||
|cluster_id=chr9:102584278..102584285,+ | |||
|coexpression_cluster_id=C1466 | |||
|description=CAGE_peak_5_at_NR4A3_5end | |||
|id=chr9:102584278..102584285,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.72e-23!76;CL:0000860!7.12e-23!45;CL:0002057!2.20e-22!42;CL:0000738!1.03e-21!140;CL:0000557!2.81e-20!71;CL:0002009!2.92e-18!65;CL:0000839!3.63e-17!70;CL:0002194!6.10e-17!63;CL:0000576!6.10e-17!63;CL:0000040!6.10e-17!63;CL:0000559!6.10e-17!63;CL:0002031!1.37e-13!124;CL:0000763!3.20e-13!112;CL:0000049!3.20e-13!112;CL:0002087!5.02e-13!119;CL:0000037!9.06e-13!172;CL:0000566!9.06e-13!172;CL:0002032!5.03e-11!165;CL:0000837!5.03e-11!165;CL:0000988!5.95e-11!182;CL:0000451!1.98e-09!10;CL:0000990!4.50e-08!8;CL:0000094!3.73e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.73e-20;33!CL:0002057;5.73e-20;33!CL:0000451;1.20e-14;10!CL:0000766;4.95e-14;69!CL:0000473;6.29e-14;39!CL:0000234;6.29e-14;39!CL:0000576;6.47e-14;48!CL:0000990;2.14e-12;8!CL:0000094;6.99e-11;8!CL:0000840;7.26e-09;5!CL:0000738;3.52e-08;136!CL:0000624;9.36e-08;6!CL:0000453;9.47e-08;5!CL:0002087;2.08e-07;104!CL:0000081;2.73e-07;11!CL:0002393;6.02e-07;6!CL:0002397;6.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.39e-36,136;CL:0000766,2.19e-33,72;CL:0000557,3.38e-28,67;CL:0000860,2.00e-27,42;CL:0002057,2.00e-27,42;CL:0000037,1.71e-25,168;CL:0002009,1.59e-24,61;CL:0000839,5.25e-24,66;CL:0000473,7.29e-24,48;CL:0000234,7.29e-24,48;CL:0000763,4.25e-23,108;CL:0000049,4.25e-23,108;CL:0000988,7.08e-23,177;CL:0002031,1.18e-22,120;CL:0002194,1.99e-22,59;CL:0000576,1.99e-22,59;CL:0000040,1.99e-22,59;CL:0000559,1.99e-22,59;CL:0002032,2.11e-22,161;CL:0000837,2.11e-22,161;CL:0002087,3.59e-21,115;CL:0000451,1.22e-14,10;CL:0000990,2.18e-12,8;CL:0000094,7.23e-11,8;CL:0000840,7.19e-09,5;CL:0001029,7.19e-09,5;CL:0000134,1.06e-08,354;CL:0000219,2.06e-08,386;CL:0002320,4.75e-08,361;CL:0000453,9.85e-08,5;CL:0000624,1.01e-07,6;CL:0000081,2.79e-07,11;CL:0002393,6.59e-07,9;CL:0002397,6.59e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.85e-19!80;UBERON:0001474!1.10e-18!86;UBERON:0004765!5.26e-18!101;UBERON:0001434!5.26e-18!101;UBERON:0002390!2.44e-17!102;UBERON:0003061!2.44e-17!102;UBERON:0002193!5.22e-14!112;UBERON:0002405!5.53e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-26,76;UBERON:0001474,1.23e-24,82;UBERON:0002390,3.05e-21,98;UBERON:0003061,3.05e-21,98;UBERON:0004765,6.30e-21,90;UBERON:0002405,1.19e-19,93;UBERON:0001434,4.32e-19,100;UBERON:0002193,1.18e-17,108;UBERON:0002384,7.68e-08,371;UBERON:0002204,1.02e-07,167;UBERON:0003081,2.91e-07,203 | |||
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| ||
|short_description=p5@NR4A3 | |||
}} | }} |
Latest revision as of 20:28, 19 September 2015
Short description: | p5@NR4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR4A3_5end |
Coexpression cluster: | C1466_immature_Mast_CD14_Eosinophils_CD8_CD4_Basophils |
Association with transcript: | 123bp_to_ENST00000395096_5end |
EntrezGene: | NR4A3 |
HGNC: | 7982 |
UniProt: | E9PBS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.84e-26 | 76 |
bone element | 1.23e-24 | 82 |
hematopoietic system | 3.05e-21 | 98 |
blood island | 3.05e-21 | 98 |
skeletal element | 6.30e-21 | 90 |
immune system | 1.19e-19 | 93 |
skeletal system | 4.32e-19 | 100 |
hemolymphoid system | 1.18e-17 | 108 |
connective tissue | 7.68e-08 | 371 |
musculoskeletal system | 1.02e-07 | 167 |
lateral plate mesoderm | 2.91e-07 | 203 |