FFCP PHASE1:Hg19::chr1:2126192..2126218,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=199990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26428 | |||
|TSSclassifier=strong | |||
|UniProt=Q6NZ36 | |||
|association_with_transcript=0bp_to_ENST00000378546,ENST00000414253,NM_182533,uc001aiv.1,uc001aiw.1,uc001aiy.2_5end | |||
|cluster_id=chr1:2126192..2126218,- | |||
|coexpression_cluster_id=C3937 | |||
|description=CAGE_peak_1_at_C1orf86_5end | |||
|id=chr1:2126192..2126218,- | |||
|ontology_enrichment_celltype=CL:0002321!8.23e-17!248;CL:0000220!1.28e-16!246;CL:0000055!3.10e-14!180;CL:0000183!6.79e-13!59;CL:0000222!7.43e-12!119;CL:0000393!9.04e-12!60;CL:0000211!9.04e-12!60;CL:0000187!1.46e-10!54;CL:0000680!2.27e-10!57;CL:0000056!2.27e-10!57;CL:0000355!2.27e-10!57;CL:0000144!9.07e-10!625;CL:0002371!1.43e-09!591;CL:0000012!4.27e-09!682;CL:0000192!5.34e-09!42;CL:0000514!5.34e-09!42;CL:0000548!5.58e-09!679;CL:0000004!5.58e-09!679;CL:0000255!5.58e-09!679;CL:0000133!6.07e-07!59;CL:0000359!7.48e-07!32 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.25e-17,250;CL:0000222,3.14e-12,121;CL:0000393,7.47e-12,61;CL:0000211,7.47e-12,61;CL:0000187,1.21e-10,55;CL:0000680,1.86e-10,58;CL:0000056,1.86e-10,58;CL:0000355,1.86e-10,58;CL:0000192,4.48e-09,43;CL:0000514,4.48e-09,43;CL:0000133,6.07e-07,59;CL:0000359,7.48e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.27e-11!143;UBERON:0004290!1.22e-10!70;UBERON:0000486!2.06e-10!82;UBERON:0001134!1.57e-09!61;UBERON:0002036!1.57e-09!61;UBERON:0003082!1.57e-09!61;UBERON:0000914!1.67e-09!83;UBERON:0002329!1.67e-09!83;UBERON:0003077!1.67e-09!83;UBERON:0003059!1.67e-09!83;UBERON:0007282!1.67e-09!83;UBERON:0009618!1.67e-09!83;UBERON:0007285!1.67e-09!83;UBERON:0002100!2.32e-09!216;UBERON:0000490!6.14e-09!138;UBERON:0002385!1.42e-08!63;UBERON:0001015!1.42e-08!63;UBERON:0000383!1.42e-08!63;UBERON:0003104!2.34e-08!238;UBERON:0009142!2.34e-08!238;UBERON:0002049!3.67e-08!79;UBERON:0007798!3.67e-08!79;UBERON:0005085!2.35e-07!29;UBERON:0000019!5.62e-07!19;UBERON:0000047!5.62e-07!19;UBERON:0004088!5.62e-07!19;UBERON:0003072!5.62e-07!19;UBERON:0003071!5.62e-07!19;UBERON:0004128!5.62e-07!19;UBERON:0001456!7.78e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000019;5.10e-07;19!UBERON:0000047;5.10e-07;19!UBERON:0004088;5.10e-07;19!UBERON:0010230;5.10e-07;19!UBERON:0001456;7.31e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.98e-13,78;UBERON:0003104,7.38e-13,160;UBERON:0009142,7.38e-13,160;UBERON:0002329,9.88e-11,71;UBERON:0003059,9.88e-11,71;UBERON:0007282,9.88e-11,71;UBERON:0004290,9.88e-11,71;UBERON:0009618,9.88e-11,71;UBERON:0007524,1.24e-10,73;UBERON:0005256,1.56e-10,122;UBERON:0000486,1.65e-10,83;UBERON:0003077,2.91e-10,72;UBERON:0007285,2.91e-10,72;UBERON:0002100,3.49e-10,199;UBERON:0000490,3.94e-10,148;UBERON:0001134,1.27e-09,62;UBERON:0002036,1.27e-09,62;UBERON:0003082,1.27e-09,62;UBERON:0002385,1.14e-08,64;UBERON:0001015,1.14e-08,64;UBERON:0000383,1.14e-08,64;UBERON:0002049,6.44e-08,78;UBERON:0007798,6.44e-08,78;UBERON:0005085,7.63e-07,31 | |||
|phase1_expression=29.7952542003713,32.7573801553204,28.7546984355781,28.0205235388765,32.628159893192,35.7658794881151,60.7919707603945,32.8494334181952,59.5503232295632,30.4710081261871,110.950385707616,45.4358054030758,66.4692785135703,51.6105691843394,67.6050646484948,48.4074105445278,43.3940060177263,43.8186054232424,55.1364062633273,62.7917396191618,103.632351152081,95.9171447722949,60.9682652589151,52.4229048029147,60.3860096451001,21.7778206381661,17.4053249633885,17.5525042329505,28.3222279331211,9.97956435052753,34.2143632528528,48.7293248973831,49.6989765984113,47.6982673115156,32.3038226419858,38.2435235391164,55.784083473621,33.2397245119126,26.872955960999,19.9650001058584,32.9155747132689,41.4583892504294,38.636335145128,20.3557534291391,14.3592858601748,10.1885305698883,18.1294648786434,13.9797081927421,12.6979612066992,24.4538533473828,20.4928565223281,16.3172738623124,22.0637235671436,12.9096936716765,14.8969135253776,21.8361113869421,10.3704337021981,7.41587498668779,20.5076207888505,13.799948164272,7.03270838378945,21.4403345121365,16.1565562673522,12.3605177654481,20.3146467040009,11.9150897185139,8.71951148593805,19.8486445552827,18.7733850631273,12.8141418376019,15.7403870684676,13.6262725315399,12.3420331101945,19.6467416270106,26.7881417955955,24.3204028789716,19.8821677129296,24.92936421169,21.0550518573175,23.6560577305236,25.8591680358817,29.0436004485768,36.9592113368778,34.9528711207764,36.4698794084057,39.6859106986852,38.8384107424932,35.0598988372235,45.6120962221555,26.7135051269902,36.4296300230047,17.6171156811282,26.3768527406408,40.973111859498,25.7833938971507,40.2977649705868,18.4907183907003,38.9080655121673,36.8026683209121,20.7311254284441,30.6366930635575,35.508585430105,35.068811113424,18.605546299824,19.7385958008141,27.6917368229526,13.2693893244858,43.1667747475525,32.7749555850893,36.5052148220161,32.0566020631584,15.6493666296928,21.0566919690126,29.1619502617787,28.2245914273437,20.2823723428643,32.9569624497652,37.111764112124,16.6992996732872,28.3523218748446,24.0900877926875,38.018081777935,24.2425941715214,24.3174561193395,19.9889162483753,26.2822749768859,33.6662478737629,27.4185170785636,26.2091391867837,19.4064701202951,63.38978524163,35.5471455642927,47.3091478821062,35.4210369336875,36.5976674764199,45.4818069536986,15.905718941022,33.5778060508819,54.2629850521749,64.079795866681,59.7276542713257,36.477672526113,96.1739561092311,54.8760975320955,26.612886279684,25.5970713829923,20.3425679593864,38.8739717617707,57.7714859887929,48.660932674173,29.4168362902724,58.4959524672165,38.8797361800506,38.4409400508327,73.8319007729434,51.4470738427926,32.3942198132056,38.7625138753993,37.7112238447913,27.7818108594676,62.0357148348086,26.6095237001479,90.5470233503709,36.398644954241,78.5837689445307,23.3965288104289,35.0265821296825,40.4275214935127,39.8623257411296,42.7169546805658,53.4949092276789,19.7670626154095,34.9002237733493,50.1508159963915,36.7759244254536,27.9853430778721,12.5788721772558,16.3496873826824,41.1415323350094,53.2643720135192,44.8345782064761,108.53372130355,29.253837327578,43.1074150623002,29.7500663666495,34.3581360753994,32.2658517708799,67.4845723681334,49.633452216021,41.0739711512003,60.5267156234794,35.7000875877045,32.6983347623626,31.3205298946014,28.1732756331753,45.4486974053541,39.4704484091424,38.0160914330257,64.7839354709819,57.3401658020957,119.290611541496,36.8656089559405,34.1573559250462,22.1651292387346,48.726515917773,45.3601937782549,56.0387959721606,25.0685124783646,11.3015470483983,42.2843629860764,39.2074017145189,16.5050102846421,32.3584941808698,12.6243864622358,43.551344381592,13.8396592437838,37.6106839922227,9.59248342127635,37.4643087474158,24.7318466932782,13.1353549231147,43.2226501396577,27.129694769678,27.0565194428616,21.8196896472668,27.8200457527334,41.8369812024512,40.15651980141,37.0658677753764,39.0802177407947,47.6886408154938,41.6074189346446,53.1928409921374,88.1240085324253,58.0166669680418,31.5770191061746,41.869009936836,26.8556436090446,20.3987474994503,20.2449265102125,21.9485005737464,20.2627883005938,18.2698376715544,27.5055868646735,25.1163475360443,20.3915993181587,64.957680006969,82.742646544033,41.9805491558028,105.84627219759,31.6887587054577,12.7767538168091,22.4500164538934,31.7853431578548,12.7907976084838,45.1223341085122,40.0588541741483,37.0925785750145,33.0740319234265,29.720890895888,81.7778846328915,58.2363479756564,54.8459099696038,55.4147335780867,29.1173561704838,43.4543007760832,40.7427251067417,29.4893935963627,26.8669495306154,15.4527509177077,36.6863339070222,20.5923753322529,38.9413645196468,17.8094284574876,16.9661949480848,12.9015338490572,26.5988812427459,20.3443756959773,49.072982933147,6.89728533054321,28.9679347903514,22.3914364784034,21.3297531057103,26.258426152687,32.7014155604671,90.1492684317535,93.7739577680376,90.6683963920338,43.5988569062092,44.4507725608998,50.0196257103512,36.8911267496237,40.9802464703283,26.401782895542,32.4472006552022,361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| |||
|short_description=p1@C1orf86 | |||
}} |
Latest revision as of 23:44, 24 September 2015
Short description: | p1@C1orf86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf86_5end |
Coexpression cluster: | C3937_Mesenchymal_Renal_Alveolar_Pericytes_Placental_Fibroblast_Osteoblast |
Association with transcript: | 0bp_to_ENST00000378546, ENST00000414253, NM_182533, uc001aiv.1, uc001aiw.1, uc001aiy.2_5end |
EntrezGene: | C1orf86 |
HGNC: | 26428 |
UniProt: | Q6NZ36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.25e-17 | 250 |
mesodermal cell | 3.14e-12 | 121 |
electrically responsive cell | 7.47e-12 | 61 |
electrically active cell | 7.47e-12 | 61 |
muscle cell | 1.21e-10 | 55 |
muscle precursor cell | 1.86e-10 | 58 |
myoblast | 1.86e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.86e-10 | 58 |
smooth muscle cell | 4.48e-09 | 43 |
smooth muscle myoblast | 4.48e-09 | 43 |
neurectodermal cell | 6.07e-07 | 59 |
vascular associated smooth muscle cell | 7.48e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.98e-13 | 78 |
mesenchyme | 7.38e-13 | 160 |
entire embryonic mesenchyme | 7.38e-13 | 160 |
somite | 9.88e-11 | 71 |
presomitic mesoderm | 9.88e-11 | 71 |
presumptive segmental plate | 9.88e-11 | 71 |
dermomyotome | 9.88e-11 | 71 |
trunk paraxial mesoderm | 9.88e-11 | 71 |
dense mesenchyme tissue | 1.24e-10 | 73 |
trunk mesenchyme | 1.56e-10 | 122 |
multilaminar epithelium | 1.65e-10 | 83 |
paraxial mesoderm | 2.91e-10 | 72 |
presumptive paraxial mesoderm | 2.91e-10 | 72 |
trunk | 3.49e-10 | 199 |
unilaminar epithelium | 3.94e-10 | 148 |
skeletal muscle tissue | 1.27e-09 | 62 |
striated muscle tissue | 1.27e-09 | 62 |
myotome | 1.27e-09 | 62 |
muscle tissue | 1.14e-08 | 64 |
musculature | 1.14e-08 | 64 |
musculature of body | 1.14e-08 | 64 |
vasculature | 6.44e-08 | 78 |
vascular system | 6.44e-08 | 78 |
ectodermal placode | 7.63e-07 | 31 |