FFCP PHASE1:Hg19::chr1:207226371..207226419,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5208 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8873 | |||
|TSSclassifier=strong | |||
|UniProt=O60825 | |||
|association_with_transcript=-185bp_to_ENST00000367080_5end | |||
|cluster_id=chr1:207226371..207226419,+ | |||
|description=CAGE_peak_2_at_PFKFB2_5end | |||
|id=chr1:207226371..207226419,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.40e-12!76;CL:0000839!2.08e-10!70;CL:0000557!3.59e-10!71;CL:0002194!3.49e-08!63;CL:0000576!3.49e-08!63;CL:0000040!3.49e-08!63;CL:0000559!3.49e-08!63;CL:0000763!8.20e-08!112;CL:0000049!8.20e-08!112;CL:0002009!8.80e-08!65;CL:0000860!5.41e-07!45 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.36e-11,72;CL:0000839,2.08e-09,66;CL:0000557,4.02e-09,67;CL:0000473,5.92e-08,48;CL:0000234,5.92e-08,48;CL:0000763,2.75e-07,108;CL:0000049,2.75e-07,108;CL:0002194,3.30e-07,59;CL:0000576,3.30e-07,59;CL:0000040,3.30e-07,59;CL:0000559,3.30e-07,59;CL:0002009,8.87e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.58e-17!94;UBERON:0001016!2.58e-17!94;UBERON:0005743!4.98e-16!86;UBERON:0001017!1.13e-15!82;UBERON:0001049!3.11e-15!57;UBERON:0005068!3.11e-15!57;UBERON:0006241!3.11e-15!57;UBERON:0007135!3.11e-15!57;UBERON:0002780!4.29e-15!41;UBERON:0001890!4.29e-15!41;UBERON:0006240!4.29e-15!41;UBERON:0000955!5.17e-15!69;UBERON:0006238!5.17e-15!69;UBERON:0007023!4.86e-14!115;UBERON:0003080!5.65e-14!42;UBERON:0002616!3.79e-13!59;UBERON:0001893!1.19e-11!34;UBERON:0002020!1.46e-11!34;UBERON:0003528!1.46e-11!34;UBERON:0002791!2.87e-11!33;UBERON:0001869!1.21e-10!32;UBERON:0002346!2.66e-10!90;UBERON:0003075!1.32e-09!86;UBERON:0007284!1.32e-09!86;UBERON:0000062!3.00e-09!511;UBERON:0001474!5.53e-09!86;UBERON:0002371!7.21e-09!80;UBERON:0003056!1.33e-08!61;UBERON:0000956!4.51e-08!25;UBERON:0000203!4.51e-08!25;UBERON:0002619!5.93e-08!22;UBERON:0004765!1.81e-07!101;UBERON:0001434!1.81e-07!101;UBERON:0001950!3.92e-07!20;UBERON:0000033!8.30e-07!123;UBERON:0000153!8.84e-07!129;UBERON:0007811!8.84e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.81e-11;41!UBERON:0001890;1.81e-11;41!UBERON:0001893;2.99e-10;34!UBERON:0003528;4.13e-10;34!UBERON:0002020;4.13e-10;34!UBERON:0000073;6.63e-10;53!UBERON:0002616;6.63e-10;53!UBERON:0002791;7.84e-10;32!UBERON:0001869;9.87e-10;32!UBERON:0001017;2.57e-08;75!UBERON:0000956;3.11e-08;25!UBERON:0000203;3.11e-08;25!UBERON:0002619;4.10e-08;22!UBERON:0000955;2.06e-07;68!UBERON:0001950;2.40e-07;20!UBERON:0001016;5.05e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.53e-18,89;UBERON:0001017,7.00e-17,81;UBERON:0001049,1.32e-16,56;UBERON:0005068,1.32e-16,56;UBERON:0006241,1.32e-16,56;UBERON:0007135,1.32e-16,56;UBERON:0000955,6.29e-16,68;UBERON:0006238,6.29e-16,68;UBERON:0002780,1.87e-15,41;UBERON:0001890,1.87e-15,41;UBERON:0003080,1.87e-15,41;UBERON:0006240,1.87e-15,41;UBERON:0000073,4.37e-15,53;UBERON:0002616,4.37e-15,53;UBERON:0007023,8.53e-14,114;UBERON:0001893,6.41e-12,34;UBERON:0003528,7.91e-12,34;UBERON:0002020,7.91e-12,34;UBERON:0002346,1.33e-11,86;UBERON:0002791,6.40e-11,32;UBERON:0001869,6.95e-11,32;UBERON:0003075,7.27e-11,82;UBERON:0007284,7.27e-11,82;UBERON:0003056,6.80e-10,61;UBERON:0000956,3.02e-08,25;UBERON:0000203,3.02e-08,25;UBERON:0002619,4.00e-08,22;UBERON:0001474,4.87e-08,82;UBERON:0002371,6.64e-08,76;UBERON:0011216,1.31e-07,223;UBERON:0004765,2.03e-07,90;UBERON:0001950,2.77e-07,20;UBERON:0004121,3.19e-07,171;UBERON:0000924,3.19e-07,171;UBERON:0006601,3.19e-07,171 | |||
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| |||
|short_description=p2@PFKFB2 | |||
}} |
Latest revision as of 07:01, 20 September 2015
Short description: | p2@PFKFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PFKFB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -185bp_to_ENST00000367080_5end |
EntrezGene: | PFKFB2 |
HGNC: | 8873 |
UniProt: | O60825 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.36e-11 | 72 |
myeloid lineage restricted progenitor cell | 2.08e-09 | 66 |
granulocyte monocyte progenitor cell | 4.02e-09 | 67 |
defensive cell | 5.92e-08 | 48 |
phagocyte | 5.92e-08 | 48 |
myeloid cell | 2.75e-07 | 108 |
common myeloid progenitor | 2.75e-07 | 108 |
monopoietic cell | 3.30e-07 | 59 |
monocyte | 3.30e-07 | 59 |
monoblast | 3.30e-07 | 59 |
promonocyte | 3.30e-07 | 59 |
macrophage dendritic cell progenitor | 8.87e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.53e-18 | 89 |
central nervous system | 7.00e-17 | 81 |
neural tube | 1.32e-16 | 56 |
neural rod | 1.32e-16 | 56 |
future spinal cord | 1.32e-16 | 56 |
neural keel | 1.32e-16 | 56 |
brain | 6.29e-16 | 68 |
future brain | 6.29e-16 | 68 |
regional part of forebrain | 1.87e-15 | 41 |
forebrain | 1.87e-15 | 41 |
anterior neural tube | 1.87e-15 | 41 |
future forebrain | 1.87e-15 | 41 |
regional part of nervous system | 4.37e-15 | 53 |
regional part of brain | 4.37e-15 | 53 |
adult organism | 8.53e-14 | 114 |
telencephalon | 6.41e-12 | 34 |
brain grey matter | 7.91e-12 | 34 |
gray matter | 7.91e-12 | 34 |
neurectoderm | 1.33e-11 | 86 |
regional part of telencephalon | 6.40e-11 | 32 |
cerebral hemisphere | 6.95e-11 | 32 |
neural plate | 7.27e-11 | 82 |
presumptive neural plate | 7.27e-11 | 82 |
pre-chordal neural plate | 6.80e-10 | 61 |
cerebral cortex | 3.02e-08 | 25 |
pallium | 3.02e-08 | 25 |
regional part of cerebral cortex | 4.00e-08 | 22 |
bone element | 4.87e-08 | 82 |
bone marrow | 6.64e-08 | 76 |
organ system subdivision | 1.31e-07 | 223 |
skeletal element | 2.03e-07 | 90 |
neocortex | 2.77e-07 | 20 |
ectoderm-derived structure | 3.19e-07 | 171 |
ectoderm | 3.19e-07 | 171 |
presumptive ectoderm | 3.19e-07 | 171 |