FFCP PHASE1:Hg19::chr1:203317193..203317209,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2331 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3774 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=195bp_to_uc010pqi.1_5end | |||
|cluster_id=chr1:203317193..203317209,- | |||
|coexpression_cluster_id=C546 | |||
|description=CAGE_peak_11_at_FMOD_5end | |||
|id=chr1:203317193..203317209,- | |||
|ontology_enrichment_celltype=CL:0000136!1.71e-11!15;CL:0000153!1.72e-08!9;CL:0000447!1.72e-08!9;CL:0000499!1.93e-07!27;CL:0000667!4.85e-07!6;CL:0000058!4.85e-07!6;CL:0000138!4.85e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.17e-29;13!CL:0000153;4.87e-19;9!CL:0000447;4.87e-19;9!CL:0002615;3.20e-16;3!CL:0002579;5.04e-15;3!CL:0000327;6.05e-15;15!CL:0000138;1.90e-13;6!CL:0002617;8.52e-11;2!CL:0002334;8.99e-10;12!CL:0000499;1.42e-07;28!CL:0002580;2.87e-07;3!CL:0000214;2.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.29e-25,15;CL:0000153,5.46e-19,9;CL:0000447,5.46e-19,9;CL:0002615,3.64e-16,3;CL:0002579,2.63e-15,3;CL:0000327,6.07e-15,15;CL:0000058,2.38e-13,6;CL:0000138,2.38e-13,6;CL:0002617,9.88e-11,2;CL:0002334,6.51e-10,12;CL:0000499,1.42e-07,28;CL:0002580,2.57e-07,3;CL:0000214,2.57e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.14e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-13!115;UBERON:0004457!7.66e-12!12;UBERON:0000042!7.66e-12!12;UBERON:0003688!1.76e-10!6;UBERON:0002358!1.76e-10!6;UBERON:0003684!1.76e-10!6;UBERON:0001178!1.76e-10!6;UBERON:0004458!4.50e-09!49;UBERON:0002323!8.05e-08!46;UBERON:0003101!8.69e-07!22;UBERON:0000079!8.69e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.14e-34;9!UBERON:0000042;8.14e-34;9!UBERON:0003688;1.88e-29;6!UBERON:0002358;1.88e-29;6!UBERON:0003684;1.88e-29;6!UBERON:0001178;1.88e-29;6!UBERON:0000310;8.89e-12;10!UBERON:0001443;1.10e-10;11!UBERON:0003978;1.78e-07;3!UBERON:0000946;1.78e-07;3!UBERON:0006915;2.87e-07;3!UBERON:0007616;2.87e-07;3!UBERON:0002217;2.87e-07;3!UBERON:0002018;2.87e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.10e-29,6;UBERON:0002358,1.10e-29,6;UBERON:0003684,1.10e-29,6;UBERON:0001178,1.10e-29,6;UBERON:0004457,2.98e-25,12;UBERON:0000042,2.98e-25,12;UBERON:0000310,8.31e-12,10;UBERON:0001443,1.04e-10,11;UBERON:0009569,1.45e-07,112;UBERON:0003978,1.69e-07,3;UBERON:0009751,1.69e-07,3;UBERON:0000946,1.69e-07,3;UBERON:0002523,1.69e-07,3;UBERON:0005983,1.69e-07,3;UBERON:0002165,1.69e-07,3;UBERON:0002062,1.69e-07,3;UBERON:0007280,1.69e-07,3;UBERON:0006915,2.57e-07,3;UBERON:0007616,2.57e-07,3;UBERON:0002217,2.57e-07,3;UBERON:0002018,2.57e-07,3 | |||
|phase1_expression=2.54349730978779,2.14100523890983,6.48390258841467,3.00219895059391,6.70441641640932,3.48935409640147,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0.722878304769133,1.00267582127178,2.60723734129483,3.1811437882044,12.6525066278685,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.901428353439581,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,1.13152239773168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,2.29723871668228,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,1.73675465473144,0.460385919864187,2.24528075546459,2.94720043288112,1.53512174720011,2.89537058058494,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11107635297664,1.97576935775941,0,0,0,0,0,0.470719003883896,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,3.38721580026819,0,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,1.07730361905316,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,1.70603764996917,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58564802544508,1.3749625440701,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.314408610199332,1.24271716604159,0.496166021811951,0,0,0,0.544017803369474,1.0027595760908,1.22538230705385,2.62298104567844,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0.521745061811734,1.20206087197775,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0.397832444232549,0.902523940191087,0,0,0,0.163771917510097,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0.535701835878287,0,0.606965604236632,0,0.266107110487916,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0.78624198594322,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,3.4794432940146,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,0,0.297046400327086,0.8453114551668,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,3.1741610430924,0,0.924351257262837,0.432626562123789,0,0,4.94124153944604,0.101988829741982,0,0,0,0.227336094654718,0.267964130156178,0,0,0.426467963801962,0.476128862927481,0,0.0620747142958579,0,0.700118741059814,0.606351566874658,0.653150243690884,0.684466602170562,0.0673520530145875,0.645499848534087,4.32458463509817,0,0,0,0,2.34640942403454,0.366724332548599,1.22068853494722,0.665756774185513,1.00636896795513,0 | |||
|short_description=p11@FMOD | |||
}} |
Latest revision as of 23:05, 19 September 2015
Short description: | p11@FMOD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FMOD_5end |
Coexpression cluster: | C546_Chondrocyte_heart_mature_Adipocyte_teratocarcinoma_aorta_dura |
Association with transcript: | 195bp_to_uc010pqi.1_5end |
EntrezGene: | FMOD |
HGNC: | 3774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.29e-25 | 15 |
GAG secreting cell | 5.46e-19 | 9 |
carbohydrate secreting cell | 5.46e-19 | 9 |
adipocyte of omentum tissue | 3.64e-16 | 3 |
omentum preadipocyte | 2.63e-15 | 3 |
extracellular matrix secreting cell | 6.07e-15 | 15 |
chondroblast | 2.38e-13 | 6 |
chondrocyte | 2.38e-13 | 6 |
adipocyte of breast | 9.88e-11 | 2 |
preadipocyte | 6.51e-10 | 12 |
stromal cell | 1.42e-07 | 28 |
preadipocyte of the breast | 2.57e-07 | 3 |
synovial cell | 2.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.10e-29 | 6 |
peritoneum | 1.10e-29 | 6 |
abdominal cavity | 1.10e-29 | 6 |
visceral peritoneum | 1.10e-29 | 6 |
cavity lining | 2.98e-25 | 12 |
serous membrane | 2.98e-25 | 12 |
breast | 8.31e-12 | 10 |
chest | 1.04e-10 | 11 |
subdivision of trunk | 1.45e-07 | 112 |
valve | 1.69e-07 | 3 |
cardiac mesenchyme | 1.69e-07 | 3 |
cardial valve | 1.69e-07 | 3 |
tunica intima | 1.69e-07 | 3 |
heart layer | 1.69e-07 | 3 |
endocardium | 1.69e-07 | 3 |
endocardial cushion | 1.69e-07 | 3 |
presumptive endocardium | 1.69e-07 | 3 |
stratified squamous epithelium | 2.57e-07 | 3 |
layer of synovial tissue | 2.57e-07 | 3 |
synovial joint | 2.57e-07 | 3 |
synovial membrane of synovial joint | 2.57e-07 | 3 |