FFCP PHASE1:Hg19::chr1:203317172..203317190,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2331 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3774 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=214bp_to_uc010pqi.1_5end | |||
|cluster_id=chr1:203317172..203317190,- | |||
|coexpression_cluster_id=C546 | |||
|description=CAGE_peak_12_at_FMOD_5end | |||
|id=chr1:203317172..203317190,- | |||
|ontology_enrichment_celltype=CL:0000136!2.90e-17!15;CL:0000153!3.51e-10!9;CL:0000447!3.51e-10!9;CL:0000667!2.82e-08!6;CL:0000058!2.82e-08!6;CL:0000138!2.82e-08!6;CL:0002615!5.14e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.81e-47;13!CL:0002615;8.23e-17;3!CL:0000153;1.17e-14;9!CL:0000447;1.17e-14;9!CL:0002617;6.05e-12;2!CL:0000138;7.26e-09;6!CL:0000327;1.10e-08;15!CL:0002579;3.36e-08;3!CL:0000214;1.19e-07;3!CL:0002334;3.06e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.47e-40,15;CL:0002615,1.44e-16,3;CL:0000153,9.50e-15,9;CL:0000447,9.50e-15,9;CL:0002617,7.13e-12,2;CL:0000058,7.97e-09,6;CL:0000138,7.97e-09,6;CL:0000327,9.70e-09,15;CL:0002579,3.08e-08,3;CL:0000214,8.19e-08,3;CL:0002334,2.47e-07,12;CL:0002581,8.67e-07,1;CL:0002616,9.67e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006965;4.71e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-13!115;UBERON:0004457!1.59e-09!12;UBERON:0000042!1.59e-09!12;UBERON:0003688!8.28e-09!6;UBERON:0002358!8.28e-09!6;UBERON:0003684!8.28e-09!6;UBERON:0001178!8.28e-09!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.70e-28;9!UBERON:0000042;5.70e-28;9!UBERON:0003688;2.10e-22;6!UBERON:0002358;2.10e-22;6!UBERON:0003684;2.10e-22;6!UBERON:0001178;2.10e-22;6!UBERON:0005406;9.28e-12;2!UBERON:0002133;2.11e-11;2!UBERON:0003978;7.00e-08;3!UBERON:0000946;7.00e-08;3!UBERON:0006915;1.19e-07;3!UBERON:0007616;1.19e-07;3!UBERON:0002217;1.19e-07;3!UBERON:0002018;1.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.00e-22,6;UBERON:0002358,3.00e-22,6;UBERON:0003684,3.00e-22,6;UBERON:0001178,3.00e-22,6;UBERON:0004457,8.55e-21,12;UBERON:0000042,8.55e-21,12;UBERON:0005406,7.13e-12,2;UBERON:0002133,1.50e-11,2;UBERON:0003978,5.60e-08,3;UBERON:0009751,5.60e-08,3;UBERON:0000946,5.60e-08,3;UBERON:0002523,5.60e-08,3;UBERON:0005983,5.60e-08,3;UBERON:0002165,5.60e-08,3;UBERON:0002062,5.60e-08,3;UBERON:0007280,5.60e-08,3;UBERON:0006915,8.19e-08,3;UBERON:0007616,8.19e-08,3;UBERON:0002217,8.19e-08,3;UBERON:0002018,8.19e-08,3;UBERON:0004458,3.54e-07,49 | |||
|phase1_expression=5.63202975738726,2.14100523890983,6.06103937612676,1.0007329835313,5.81049422755474,2.61701557230111,0,0.631719873426831,1.04474251279935,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.00535164254356,0.579386075843295,7.15757352345989,8.75942766544745,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,1.05166641234618,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,1.77810662500693,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,1.48864684691266,0,0.561320188866147,3.58789617915963,0,2.89537058058494,2.96836132889982,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.89996871767898,1.31717957183961,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.769502585037971,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51354161145029,0.229160424011684,1.43574604915363,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0.157204305099666,1.65695622138878,0.496166021811951,0,0,0,1.08803560673895,1.0027595760908,3.06345576763462,2.29510841496863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0.901545653983311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,1.19349733269765,1.35378591028663,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,1.2679671827502,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,2.31087814315709,0,0,0,3.67425652933167,0,0,0,0,0.530450887527676,0,0,0,0.852935927603924,0.476128862927481,0,0,0,0.763765899337979,0,0.217716747896961,0,0,0.502055437748735,0.665320713092027,0,0,0,0,0,0.366724332548599,0.406896178315738,1.33151354837103,1.40891655513718,0 | |||
|short_description=p12@FMOD | |||
}} |
Latest revision as of 23:05, 19 September 2015
Short description: | p12@FMOD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FMOD_5end |
Coexpression cluster: | C546_Chondrocyte_heart_mature_Adipocyte_teratocarcinoma_aorta_dura |
Association with transcript: | 214bp_to_uc010pqi.1_5end |
EntrezGene: | FMOD |
HGNC: | 3774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.47e-40 | 15 |
adipocyte of omentum tissue | 1.44e-16 | 3 |
GAG secreting cell | 9.50e-15 | 9 |
carbohydrate secreting cell | 9.50e-15 | 9 |
adipocyte of breast | 7.13e-12 | 2 |
chondroblast | 7.97e-09 | 6 |
chondrocyte | 7.97e-09 | 6 |
extracellular matrix secreting cell | 9.70e-09 | 15 |
omentum preadipocyte | 3.08e-08 | 3 |
synovial cell | 8.19e-08 | 3 |
preadipocyte | 2.47e-07 | 12 |
perirenal preadipocyte | 8.67e-07 | 1 |
perirenal adipocyte cell | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.00e-22 | 6 |
peritoneum | 3.00e-22 | 6 |
abdominal cavity | 3.00e-22 | 6 |
visceral peritoneum | 3.00e-22 | 6 |
cavity lining | 8.55e-21 | 12 |
serous membrane | 8.55e-21 | 12 |
perirenal fat | 7.13e-12 | 2 |
atrioventricular valve | 1.50e-11 | 2 |
valve | 5.60e-08 | 3 |
cardiac mesenchyme | 5.60e-08 | 3 |
cardial valve | 5.60e-08 | 3 |
tunica intima | 5.60e-08 | 3 |
heart layer | 5.60e-08 | 3 |
endocardium | 5.60e-08 | 3 |
endocardial cushion | 5.60e-08 | 3 |
presumptive endocardium | 5.60e-08 | 3 |
stratified squamous epithelium | 8.19e-08 | 3 |
layer of synovial tissue | 8.19e-08 | 3 |
synovial joint | 8.19e-08 | 3 |
synovial membrane of synovial joint | 8.19e-08 | 3 |
body cavity or lining | 3.54e-07 | 49 |