FFCP PHASE1:Hg19::chr9:100700439..100700486,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:100700439..100700486,-
|short_description=p1@HEMGN
|description=CAGE_peak_1_at_HEMGN_5end
|association_with_transcript=39bp_to_NM_197978,uc004axy.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55363 | |EntrezGene=55363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17509 | |HGNC=17509 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXL5 | |UniProt=Q9BXL5 | ||
|association_with_transcript=39bp_to_NM_197978,uc004axy.2_5end | |||
|cluster_id=chr9:100700439..100700486,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_HEMGN_5end | |||
|id=chr9:100700439..100700486,- | |||
|ontology_enrichment_celltype=CL:0000037!1.50e-15!172;CL:0000566!1.50e-15!172;CL:0000988!1.73e-13!182;CL:0002032!1.91e-13!165;CL:0000837!1.91e-13!165;CL:0000763!4.63e-11!112;CL:0000049!4.63e-11!112;CL:0000738!3.50e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000775;3.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.86e-10,168;CL:0000763,2.03e-09,108;CL:0000049,2.03e-09,108;CL:0000988,4.24e-09,177;CL:0002032,3.16e-08,161;CL:0000837,3.16e-08,161;CL:0000775,3.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;4.96e-10;7 | |||
|ontology_enrichment_disease=DOID:1036!5.39e-08!8;DOID:8692!8.08e-08!31;DOID:1240!1.23e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.79e-15;31!DOID:1036;2.82e-13;8!DOID:1240;1.58e-11;39!DOID:2531;1.18e-08;51!DOID:0060083;1.18e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.25e-15,31;DOID:1240,1.19e-14,39;DOID:1036,2.80e-13,8;DOID:2531,2.78e-11,51;DOID:0060083,2.78e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-35!115;UBERON:0000178!3.87e-11!15;UBERON:0000179!3.87e-11!15;UBERON:0000463!3.87e-11!15;UBERON:0001049!1.23e-09!57;UBERON:0005068!1.23e-09!57;UBERON:0006241!1.23e-09!57;UBERON:0007135!1.23e-09!57;UBERON:0002390!9.30e-08!102;UBERON:0003061!9.30e-08!102;UBERON:0002193!5.84e-07!112;UBERON:0003076!7.28e-07!15;UBERON:0003057!7.28e-07!15;UBERON:0002616!9.09e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.01e-19;15!UBERON:0000179;2.01e-19;15!UBERON:0000463;2.01e-19;15!UBERON:0002390;3.03e-16;32!UBERON:0000922;7.16e-10;49!UBERON:0002193;2.61e-08;42!UBERON:0004177;6.10e-07;5!UBERON:0005057;6.10e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.71e-19,15;UBERON:0000179,1.71e-19,15;UBERON:0000463,1.71e-19,15;UBERON:0007023,1.43e-09,114 | |||
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| ||
|short_description=p1@HEMGN | |||
}} | }} |
Latest revision as of 18:07, 19 September 2015
Short description: | p1@HEMGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HEMGN_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 39bp_to_NM_197978, uc004axy.2_5end |
EntrezGene: | HEMGN |
HGNC: | 17509 |
UniProt: | Q9BXL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.86e-10 | 168 |
myeloid cell | 2.03e-09 | 108 |
common myeloid progenitor | 2.03e-09 | 108 |
hematopoietic cell | 4.24e-09 | 177 |
hematopoietic oligopotent progenitor cell | 3.16e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.16e-08 | 161 |
neutrophil | 3.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.71e-19 | 15 |
haemolymphatic fluid | 1.71e-19 | 15 |
organism substance | 1.71e-19 | 15 |
adult organism | 1.43e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.25e-15 | 31 |
leukemia | 1.19e-14 | 39 |
chronic leukemia | 2.80e-13 | 8 |
hematologic cancer | 2.78e-11 | 51 |
immune system cancer | 2.78e-11 | 51 |