FFCP PHASE1:Hg19::chr1:19804053..19804060,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:19804053..19804060,+ | |||
|coexpression_cluster_id=C694 | |||
|description=CAGE_peak_at_chr1:19804053..19804060,+ | |||
|id=chr1:19804053..19804060,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.87e-39!140;CL:0000037!1.03e-34!172;CL:0000566!1.03e-34!172;CL:0000988!3.40e-32!182;CL:0002393!5.51e-30!9;CL:0002397!5.51e-30!9;CL:0002032!1.29e-29!165;CL:0000837!1.29e-29!165;CL:0002031!2.68e-28!124;CL:0002087!2.37e-24!119;CL:0000766!3.55e-21!76;CL:0000791!7.57e-21!18;CL:0000789!7.57e-21!18;CL:0002420!7.57e-21!18;CL:0002419!7.57e-21!18;CL:0000790!7.57e-21!18;CL:0000625!8.88e-19!11;CL:0000763!7.07e-18!112;CL:0000049!7.07e-18!112;CL:0000557!3.70e-17!71;CL:0000084!2.51e-14!25;CL:0000827!2.51e-14!25;CL:0000839!7.01e-14!70;CL:0002057!1.55e-12!42;CL:0002009!2.49e-12!65;CL:0000623!4.98e-12!3;CL:0000825!4.98e-12!3;CL:0000134!1.20e-11!358;CL:0000860!1.75e-11!45;CL:0000875!1.90e-11!3;CL:0002396!1.90e-11!3;CL:0000838!2.19e-11!52;CL:0002320!3.28e-11!365;CL:0000542!4.20e-11!53;CL:0000051!4.20e-11!53;CL:0000094!4.32e-11!8;CL:0000842!9.43e-11!3;CL:0002274!1.17e-10!5;CL:0000457!1.17e-10!5;CL:0002191!1.17e-10!5;CL:0000097!1.17e-10!5;CL:0000831!1.17e-10!5;CL:0002028!1.17e-10!5;CL:0002194!1.03e-09!63;CL:0000576!1.03e-09!63;CL:0000040!1.03e-09!63;CL:0000559!1.03e-09!63;CL:0000219!1.14e-09!390;CL:0000771!1.69e-08!2;CL:0001014!1.75e-08!2;CL:0001016!1.75e-08!2;CL:0000224!3.64e-08!4;CL:0000081!5.90e-08!11;CL:0000048!7.67e-08!430;CL:0000723!1.39e-07!436;CL:0000034!3.00e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.37e-30;3!CL:0002393;3.52e-25;6!CL:0002397;3.52e-25;6!CL:0000771;2.15e-20;2!CL:0001014;2.74e-20;2!CL:0001016;2.74e-20;2!CL:0000094;2.63e-19;8!CL:0000081;4.10e-14;11!CL:0000875;1.81e-13;3!CL:0000767;1.81e-13;3!CL:0002396;1.81e-13;3!CL:0000895;9.96e-11;1!CL:0000791;1.01e-08;18!CL:0000789;1.01e-08;18!CL:0002419;1.01e-08;18!CL:0000453;1.13e-08;5!CL:0000625;1.90e-08;11!CL:0000840;2.30e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,8.43e-37,9;CL:0002397,8.43e-37,9;CL:0000623,4.17e-30,3;CL:0000825,4.17e-30,3;CL:0000738,5.64e-25,136;CL:0002032,1.09e-20,161;CL:0000837,1.09e-20,161;CL:0000771,1.86e-20,2;CL:0001014,2.05e-20,2;CL:0001016,2.05e-20,2;CL:0000037,1.02e-19,168;CL:0000094,2.45e-19,8;CL:0000988,1.42e-18,177;CL:0002031,1.30e-17,120;CL:0000081,3.90e-14,11;CL:0000766,7.32e-14,72;CL:0002087,8.57e-14,115;CL:0000875,1.09e-13,3;CL:0002396,1.09e-13,3;CL:0000767,1.82e-13,3;CL:0000763,1.55e-12,108;CL:0000049,1.55e-12,108;CL:0002009,4.85e-11,61;CL:0000810,6.14e-11,1;CL:0000895,6.14e-11,1;CL:0002436,6.14e-11,1;CL:0002427,6.14e-11,1;CL:0002428,6.14e-11,1;CL:0002429,6.14e-11,1;CL:0002433,6.14e-11,1;CL:0002431,6.14e-11,1;CL:0002432,6.14e-11,1;CL:0000557,5.85e-10,67;CL:0000473,8.32e-09,48;CL:0000234,8.32e-09,48;CL:0000791,8.75e-09,18;CL:0000789,8.75e-09,18;CL:0002420,8.75e-09,18;CL:0002419,8.75e-09,18;CL:0000790,8.75e-09,18;CL:0000453,1.01e-08,5;CL:0000625,1.81e-08,11;CL:0000838,1.94e-08,52;CL:0000542,2.88e-08,53;CL:0000051,2.88e-08,53;CL:0000134,8.06e-08,354;CL:0002320,1.31e-07,361;CL:0000860,1.35e-07,42;CL:0002057,1.35e-07,42;CL:0000840,2.09e-07,5;CL:0001029,2.09e-07,5;CL:0002194,6.66e-07,59;CL:0000576,6.66e-07,59;CL:0000040,6.66e-07,59;CL:0000559,6.66e-07,59;CL:0000219,7.36e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002427;9.96e-11;1!CL:0000790;1.01e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.80e-20!102;UBERON:0003061!2.80e-20!102;UBERON:0002193!7.93e-18!112;UBERON:0002371!3.43e-16!80;UBERON:0001474!1.13e-14!86;UBERON:0002405!8.12e-12!115;UBERON:0004765!1.11e-11!101;UBERON:0001434!1.11e-11!101;UBERON:0002384!1.30e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.61e-10,98;UBERON:0003061,8.61e-10,98;UBERON:0002193,9.72e-09,108;UBERON:0002371,1.19e-08,76;UBERON:0002405,1.53e-08,93;UBERON:0001474,6.13e-08,82;UBERON:0002384,2.56e-07,371;UBERON:0004765,3.92e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.18009283054671,1.53531759238885,0,0,0,0,0,0,0.293600439334847,1.10799081706375,0.401088894940283,0.217010870715852,0,0,0.77272670290256,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,1.47878700418359,1.06302149982522,1.04829322754188,0.44931452458598,0.150176892841506,0.16072558669708,1.99508920618874,1.59133341759272,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0.579606171470105,0.14828656316206,0,0,0,1.91610246800961,0,0,0.318565414324097,0,0.950452044448374,0.150575119077773,0.511946444617674,0,0.236777252044017,0,3.02410114837099,3.20928234940209,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.621984346622316,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,6.5020150866636,3.66566877261179,5.00537841491019,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,1.799791132412,7.7380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:19804053..19804060,+ | |||
}} |
Latest revision as of 01:52, 28 July 2015
Short description: | p@chr1:19804053..19804060, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:19804053..19804060, + |
Coexpression cluster: | C694_immature_Natural_CD8_CD14_Eosinophils_Basophils_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.61e-10 | 98 |
blood island | 8.61e-10 | 98 |
hemolymphoid system | 9.72e-09 | 108 |
bone marrow | 1.19e-08 | 76 |
immune system | 1.53e-08 | 93 |
bone element | 6.13e-08 | 82 |
connective tissue | 2.56e-07 | 371 |
skeletal element | 3.92e-07 | 90 |