FFCP PHASE1:Hg19::chr1:18957627..18957640,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5081 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8621 | |||
|TSSclassifier=strong | |||
|UniProt=P23759,E9PFV9,Q2PJS5 | |||
|association_with_transcript=127bp_to_ENST00000375375,NM_001135254,NM_002584,NM_013945,uc001bay.2,uc001baz.2,uc010oct.1_5end | |||
|cluster_id=chr1:18957627..18957640,+ | |||
|coexpression_cluster_id=C3915 | |||
|description=CAGE_peak_4_at_PAX7_5end | |||
|id=chr1:18957627..18957640,+ | |||
|ontology_enrichment_celltype=CL:0000188!7.50e-09!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.93e-13!10;DOID:3095!3.91e-08!22;DOID:2994!3.91e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;1.22e-38;10!DOID:3095;1.19e-17;22!DOID:2994;1.19e-17;22!DOID:3193;3.86e-09;2!DOID:962;3.86e-09;2!DOID:1115;1.58e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.27e-38,10;DOID:3095,1.21e-17,22;DOID:2994,1.21e-17,22;DOID:3193,4.02e-09,2;DOID:962,4.02e-09,2;DOID:1115,1.59e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0000341!1.61e-11!2;UBERON:0001723!6.80e-08!3;UBERON:0001033!6.80e-08!3;UBERON:0010056!6.80e-08!3;UBERON:0003978!1.25e-07!3;UBERON:0009751!1.25e-07!3;UBERON:0000946!1.25e-07!3;UBERON:0002523!1.25e-07!3;UBERON:0005983!1.25e-07!3;UBERON:0002165!1.25e-07!3;UBERON:0002062!1.25e-07!3;UBERON:0007280!1.25e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.64e-62;4!UBERON:0000923;7.64e-62;4!UBERON:0010316;7.64e-62;4!UBERON:0005291;7.64e-62;4!UBERON:0002050;1.35e-49;5!UBERON:0005423;1.35e-49;5!UBERON:0003714;3.86e-09;2!UBERON:0000341;7.79e-09;2!UBERON:0000922;1.46e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,4.02e-09,2;UBERON:0000341,6.94e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247528499761764,0,0,0,0.96670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79085997398231,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0.314108192500469,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56596575179127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75251083871271,8.07784696386395,6.56859550572712,6.14509409770568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46219742103469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78173235684127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,3.62874593044325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,1.90451545170992,0,0,0,0,0.202117188958219,0.435433495793923,1.36893320434112,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@PAX7 | |||
}} |
Latest revision as of 09:09, 19 September 2015
Short description: | p4@PAX7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAX7_5end |
Coexpression cluster: | C3915_neuroectodermal_skeletal_neuroepithelioma_rhabdomyosarcoma_synovial_carcinoid_tongue |
Association with transcript: | 127bp_to_ENST00000375375, NM_001135254, NM_002584, NM_013945, uc001bay.2, uc001baz.2, uc010oct.1_5end |
EntrezGene: | PAX7 |
HGNC: | 8621 |
UniProt: | P23759E9PFV9Q2PJS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.02e-09 | 2 |
throat | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.27e-38 | 10 |
germ cell and embryonal cancer | 1.21e-17 | 22 |
germ cell cancer | 1.21e-17 | 22 |
peripheral nerve sheath neoplasm | 4.02e-09 | 2 |
neurofibroma | 4.02e-09 | 2 |
sarcoma | 1.59e-07 | 20 |