FFCP PHASE1:Hg19::chr1:183559662..183559673,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |||
|TSSclassifier=strong | |||
|UniProt=P19878 | |||
|association_with_transcript=42bp_to_ENST00000367535_5end | |||
|cluster_id=chr1:183559662..183559673,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_7_at_NCF2_5end | |||
|id=chr1:183559662..183559673,- | |||
|ontology_enrichment_celltype=CL:0000766!6.69e-51!76;CL:0000738!7.21e-50!140;CL:0002194!1.26e-48!63;CL:0000576!1.26e-48!63;CL:0000040!1.26e-48!63;CL:0000559!1.26e-48!63;CL:0002009!3.04e-48!65;CL:0000037!8.78e-48!172;CL:0000566!8.78e-48!172;CL:0000763!8.34e-46!112;CL:0000049!8.34e-46!112;CL:0002032!2.45e-45!165;CL:0000837!2.45e-45!165;CL:0000988!2.01e-44!182;CL:0002087!7.98e-44!119;CL:0000557!6.14e-42!71;CL:0000839!3.63e-41!70;CL:0002057!1.41e-39!42;CL:0002031!5.62e-38!124;CL:0000860!1.26e-35!45;CL:0000094!6.51e-09!8;CL:0002393!1.63e-08!9;CL:0002397!1.63e-08!9;CL:0000134!3.92e-07!358;CL:0000451!5.71e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.55e-58;39!CL:0000234;3.55e-58;39!CL:0000860;1.15e-57;33!CL:0002057;1.15e-57;33!CL:0000576;5.67e-54;48!CL:0000766;1.29e-42;69!CL:0000763;8.45e-25;100!CL:0002087;1.77e-18;104!CL:0000738;4.23e-17;136!CL:0000094;3.25e-16;8!CL:0000235;1.46e-13;6!CL:0000081;2.55e-11;11!CL:0000988;3.29e-11;177!CL:0002393;6.55e-11;6!CL:0002397;6.55e-11;6!CL:0000219;1.20e-07;193!CL:0000775;1.64e-07;3!CL:0002619;2.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.16e-105,72;CL:0002194,4.74e-98,59;CL:0000576,4.74e-98,59;CL:0000040,4.74e-98,59;CL:0000559,4.74e-98,59;CL:0002009,9.84e-98,61;CL:0000473,1.32e-90,48;CL:0000234,1.32e-90,48;CL:0000557,1.56e-87,67;CL:0000839,5.83e-86,66;CL:0000763,3.56e-82,108;CL:0000049,3.56e-82,108;CL:0000860,6.56e-78,42;CL:0002057,6.56e-78,42;CL:0000738,2.27e-75,136;CL:0000037,2.31e-69,168;CL:0002087,3.07e-67,115;CL:0002032,1.28e-65,161;CL:0000837,1.28e-65,161;CL:0000988,1.03e-64,177;CL:0002031,1.61e-59,120;CL:0000134,7.24e-23,354;CL:0002320,5.43e-22,361;CL:0000219,6.43e-19,386;CL:0000094,3.07e-16,8;CL:0002393,1.92e-15,9;CL:0002397,1.92e-15,9;CL:0000048,3.51e-15,427;CL:0000723,1.15e-14,433;CL:0000034,5.26e-14,441;CL:0000235,1.44e-13,6;CL:0000081,2.44e-11,11;CL:0000775,1.62e-07,3;CL:0002619,2.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.12e-55;42!CL:0000049;8.86e-25;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.87e-47!102;UBERON:0003061!9.87e-47!102;UBERON:0002193!4.42e-42!112;UBERON:0002371!1.51e-35!80;UBERON:0001474!2.76e-31!86;UBERON:0004765!7.68e-25!101;UBERON:0001434!7.68e-25!101;UBERON:0002405!3.24e-24!115;UBERON:0007023!4.41e-16!115;UBERON:0003081!7.42e-13!216;UBERON:0000178!2.60e-10!15;UBERON:0000179!2.60e-10!15;UBERON:0000463!2.60e-10!15;UBERON:0002204!3.64e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.05e-16;15!UBERON:0000179;6.05e-16;15!UBERON:0000463;6.05e-16;15!UBERON:0002390;4.91e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.88e-89,98;UBERON:0003061,2.88e-89,98;UBERON:0002193,1.40e-81,108;UBERON:0002371,3.21e-75,76;UBERON:0001474,1.68e-68,82;UBERON:0002405,3.18e-65,93;UBERON:0004765,6.30e-61,90;UBERON:0001434,3.71e-53,100;UBERON:0003081,6.73e-33,203;UBERON:0002204,3.58e-25,167;UBERON:0002384,1.38e-21,371;UBERON:0000178,6.15e-16,15;UBERON:0000179,6.15e-16,15;UBERON:0000463,6.15e-16,15;UBERON:0000926,4.30e-15,315;UBERON:0004120,4.30e-15,315;UBERON:0006603,4.30e-15,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65459202534839,6.8143489243455,4.64393609750708,7.08055698328027,6.90892916574983,5.72819656269481,0,0,0,0,0,0,3.87796785972314,5.01361118675354,2.82114131930607,18.3610688876738,21.0530882912337,18.2878653020272,23.4091164435099,18.8937971844405,16.2531320995837,23.0104746536628,19.7360586250476,15.7950249156503,21.8646218164834,20.7490172288572,13.2430048737608,19.6505038019873,14.2006630388442,13.5426486594342,19.9536879915161,20.1950551042806,15.5059204267108,24.7927952820431,15.7255223267286,16.6227652707751,14.5134572082155,24.7334935450824,14.9178662686443,22.9265298516581,20.425868088881,15.5705562248894,17.8386552332288,11.9941071236646,13.031330682307,23.005181100068,19.5187147073409,21.2029799585393,8.02770087985379,8.2915676986367,8.38634582033504,15.9506656228023,14.1166279271016,15.7511074963139,4.56020389985998,6.56425034756997,5.11459630540975,0,0.546138611262131,0,1.70692089026603,0.400395987036012,0,0.661044872784862,0.954053754535364,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0.83593247695339,0,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0.226618685395132,0,0.68725489096526,0.253019692019503,0.637130828648193,0,0,0.301150238155546,0.639933055772092,0,2.36777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,26.2883388860294,26.4677200694886,42.8124632870746,0.953962497221368,2.85997455390064,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4026709641308,46.533631697799,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,34.2241638461482,40.7167421342274,30.618019431478,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8110914833548,16.072226925828,27.4084121327941,0,0,0,0,0,0,0,0.394061520403854,0,0.513372145118994,0,0,0,0,0,17.2271615507852,20.9413021442817,33.9820721017549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92859249633486,3.66714141391649,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0.282431402330337,0,0,0,0,5.07447609232169,7.64637207142375,11.3929437434833,7.38518503919146,9.46133228098247,7.78167973431261,7.02040868409549,17.4487538784739,0,0,0,0,0,0,0,0.199579371432817,2.68107518185313,0.211673582723883,0.649243880549111,1.96558024679421,5.24939761776342,0.156679895773023,2.50634477090067,0,0.1605880751037,1.21079824314629,0.851692475380653,2.06103206853459,0.921722292925374,1.56573275524691,1.50164227540718,1.56310476321632,0,0,0,0,0,0,1.75809815126273,0,1.5602073798847,0,0,0.296964680832639,0,0.994147647766298,0,0,0,0,0.19924798825107,0.276283915531148,0,0,1.96935688737711,0,0.179736702294654,0,0,0.0986434056369336,9.57932369387759,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0.295547618953547,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,1.06606955203727,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.208843899010911,0.471807930864739,0.802577647298789,0.234264445725339,0,0,0,0,0,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.677942222341597,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.547621515567972,0,0,0.525774708558629,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,1.18542664892098,0,0.272406812223151,0,0,0,2.69968669861801,0,0,0,0.315222829196793,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.39669780522807,0.171086837884329,0,3.09683496446315,0.157204305099666,6.62782488555513,1.9846640872478,0.592834895693833,0.121792598380896,0,1.08803560673895,0,0,0.327872630709804,0,0,0,0.3755727921195,0,0.665574309221114,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0.194860308839388,0.265729680626726,0.490696182767533,0,0.245772908753719,0,0.59996218756479,0,0.344429959321631,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.41023272848151,0.252071696221718,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,1.56302802246618,0,0,0,0.135075169236789,0,0.206686796501184,0.19024743058172,0,0,0.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| |||
|short_description=p7@NCF2 | |||
}} |
Latest revision as of 03:36, 19 September 2015
Short description: | p7@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NCF2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 42bp_to_ENST00000367535_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | P19878 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.88e-89 | 98 |
blood island | 2.88e-89 | 98 |
hemolymphoid system | 1.40e-81 | 108 |
bone marrow | 3.21e-75 | 76 |
bone element | 1.68e-68 | 82 |
immune system | 3.18e-65 | 93 |
skeletal element | 6.30e-61 | 90 |
skeletal system | 3.71e-53 | 100 |
lateral plate mesoderm | 6.73e-33 | 203 |
musculoskeletal system | 3.58e-25 | 167 |
connective tissue | 1.38e-21 | 371 |
blood | 6.15e-16 | 15 |
haemolymphatic fluid | 6.15e-16 | 15 |
organism substance | 6.15e-16 | 15 |
mesoderm | 4.30e-15 | 315 |
mesoderm-derived structure | 4.30e-15 | 315 |
presumptive mesoderm | 4.30e-15 | 315 |