FFCP PHASE1:Hg19::chr1:183213300..183213316,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:183213300..183213316,+ | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_at_chr1:183213300..183213316,+ | |||
|id=chr1:183213300..183213316,+ | |||
|ontology_enrichment_celltype=CL:0002368!4.74e-21!13;CL:0002076!6.45e-20!43;CL:0000066!1.60e-19!254;CL:0002159!2.68e-16!13;CL:0000223!2.40e-13!59;CL:0002621!5.13e-12!3;CL:0002166!1.05e-11!3;CL:0002077!1.36e-10!33;CL:0002202!1.21e-09!9;CL:0002632!1.21e-09!9;CL:0000575!6.77e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.83e-40;3!CL:0002076;1.11e-18;42!CL:0002368;1.16e-16;13!CL:0000244;2.67e-14;4!CL:0000731;2.67e-14;4!CL:0002159;4.42e-09;14!CL:0000317;5.01e-08;2!CL:1000448;5.01e-08;2!CL:0002308;5.01e-08;2!CL:0002140;5.01e-08;2!CL:0000362;8.22e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.96e-40,3;CL:0002076,1.48e-19,42;CL:0002368,1.12e-16,13;CL:0000244,2.41e-14,4;CL:0000731,2.41e-14,4;CL:0000223,5.77e-14,58;CL:0000066,3.03e-10,253;CL:0002159,3.96e-09,14;CL:0000317,5.02e-08,2;CL:1000448,5.02e-08,2;CL:0002308,5.02e-08,2;CL:0002140,5.02e-08,2;CL:0000362,8.10e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.14e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;1.97e-14;1!DOID:3603;1.97e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.15e-14,1;DOID:3603,3.15e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0001949!5.13e-12!3;UBERON:0001708!7.13e-09!4;UBERON:0001704!7.13e-09!4;UBERON:0001004!9.82e-09!72;UBERON:0007196!2.64e-08!14;UBERON:0001558!2.64e-08!14;UBERON:0000365!6.44e-07!5;UBERON:0000065!6.49e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.83e-40;3!UBERON:0000486;1.08e-27;12!UBERON:0003929;9.04e-18;7!UBERON:0003350;1.24e-15;8!UBERON:0001828;1.24e-15;8!UBERON:0000365;1.24e-11;5!UBERON:0000344;6.57e-11;20!UBERON:0010371;2.50e-10;31!UBERON:0003729;7.56e-10;13!UBERON:0005910;7.59e-10;6!UBERON:0002419;5.01e-08;2!UBERON:0007771;5.01e-08;2!UBERON:0003297;5.01e-08;2!UBERON:0001821;5.01e-08;2!UBERON:0003487;5.01e-08;2!UBERON:0001820;5.01e-08;2!UBERON:0005911;5.64e-07;36!UBERON:0000161;6.70e-07;19!UBERON:0000166;6.70e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.96e-40,3;UBERON:0003350,1.28e-15,8;UBERON:0001828,1.28e-15,8;UBERON:0000365,1.15e-11,5;UBERON:0000344,7.29e-11,20;UBERON:0005910,7.10e-10,6;UBERON:0003729,7.67e-10,13;UBERON:0001004,2.82e-08,74;UBERON:0002419,5.02e-08,2;UBERON:0007771,5.02e-08,2;UBERON:0003297,5.02e-08,2;UBERON:0001821,5.02e-08,2;UBERON:0003487,5.02e-08,2;UBERON:0001820,5.02e-08,2;UBERON:0005089,5.02e-08,2;UBERON:0005088,5.02e-08,2;UBERON:0004119,3.89e-07,160;UBERON:0000925,3.89e-07,160;UBERON:0006595,3.89e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,3.27295344709002,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,1.70899253099772,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.84780341018745,0.992425680696705,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20810352485256,0.368323955743585,0,0,0,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60024098414608,0,0,0,0,0,0,0,0,0,1.81813406897076,2.69066094311149,9.82617886208298,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,0.670302275535787,0,0,0,0,1.7737206141467,3.21612760289743,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.62164849248911,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:183213300..183213316,+ | |||
}} |
Latest revision as of 01:11, 28 July 2015
Short description: | p@chr1:183213300..183213316, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183213300..183213316, + |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.96e-40 | 3 |
endo-epithelial cell | 1.48e-19 | 42 |
respiratory epithelial cell | 1.12e-16 | 13 |
transitional epithelial cell | 2.41e-14 | 4 |
urothelial cell | 2.41e-14 | 4 |
endodermal cell | 5.77e-14 | 58 |
epithelial cell | 3.03e-10 | 253 |
general ecto-epithelial cell | 3.96e-09 | 14 |
sebum secreting cell | 5.02e-08 | 2 |
epithelial cell of sweat gland | 5.02e-08 | 2 |
epithelial cell of skin gland | 5.02e-08 | 2 |
acinar cell of sebaceous gland | 5.02e-08 | 2 |
epidermal cell | 8.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.96e-40 | 3 |
epithelium of mucosa | 1.28e-15 | 8 |
gingiva | 1.28e-15 | 8 |
urothelium | 1.15e-11 | 5 |
mucosa | 7.29e-11 | 20 |
transitional epithelium | 7.10e-10 | 6 |
mouth mucosa | 7.67e-10 | 13 |
respiratory system | 2.82e-08 | 74 |
skin gland | 5.02e-08 | 2 |
epidermis gland | 5.02e-08 | 2 |
gland of integumental system | 5.02e-08 | 2 |
sebaceous gland | 5.02e-08 | 2 |
skin sebaceous gland | 5.02e-08 | 2 |
sweat gland | 5.02e-08 | 2 |
sweat gland placode | 5.02e-08 | 2 |
sebaceous gland placode | 5.02e-08 | 2 |
endoderm-derived structure | 3.89e-07 | 160 |
endoderm | 3.89e-07 | 160 |
presumptive endoderm | 3.89e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.15e-14 | 1 |
mucinous cystadenocarcinoma | 3.15e-14 | 1 |