FFCP PHASE1:Hg19::chr1:174128694..174128701,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-26bp_to_ENST00000457696_5end | |||
|cluster_id=chr1:174128694..174128701,+ | |||
|description=CAGE_peak_19_at_RABGAP1L_5end | |||
|id=chr1:174128694..174128701,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.69e-13!53;CL:0000051!3.69e-13!53;CL:0000838!6.10e-13!52;CL:0000791!2.32e-11!18;CL:0000789!2.32e-11!18;CL:0002420!2.32e-11!18;CL:0002419!2.32e-11!18;CL:0000790!2.32e-11!18;CL:0000037!9.51e-11!172;CL:0000566!9.51e-11!172;CL:0002087!1.04e-10!119;CL:0000988!1.72e-10!182;CL:0000738!2.95e-10!140;CL:0002032!3.37e-10!165;CL:0000837!3.37e-10!165;CL:0000084!5.15e-10!25;CL:0000827!5.15e-10!25;CL:0002031!1.07e-09!124;CL:0000625!8.18e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.12e-09;11!CL:0002032;9.38e-08;1!CL:0000222;9.38e-08;1!CL:0000557;9.38e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.21e-09,11 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.93e-15;4!UBERON:0007284;4.93e-15;4!UBERON:0006215;4.38e-10;3!UBERON:0004140;3.42e-08;1!UBERON:0001045;9.38e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;9.38e-08;1!DOID:0060061;9.38e-08;1!DOID:8691;9.38e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,6.52e-08,1;DOID:0060061,6.52e-08,1;DOID:8691,6.52e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.13e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;7.59e-20;3!UBERON:0000946;7.59e-20;3!UBERON:0002133;8.01e-14;2!UBERON:0001154;9.38e-08;1!UBERON:0002135;9.38e-08;1!UBERON:0002146;9.38e-08;1!UBERON:0002134;9.38e-08;1!UBERON:0001153;9.38e-08;1!UBERON:0009854;9.38e-08;1!UBERON:0005208;9.38e-08;1!UBERON:0005623;9.38e-08;1!UBERON:0004145;9.38e-08;1!UBERON:0005946;9.38e-08;1!UBERON:0005965;9.38e-08;1!UBERON:0002078;9.38e-08;1!UBERON:0000178;4.03e-07;15!UBERON:0000179;4.03e-07;15!UBERON:0000463;4.03e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.78e-20,3;UBERON:0009751,2.78e-20,3;UBERON:0000946,2.78e-20,3;UBERON:0002523,2.78e-20,3;UBERON:0005983,2.78e-20,3;UBERON:0002165,2.78e-20,3;UBERON:0002062,2.78e-20,3;UBERON:0007280,2.78e-20,3;UBERON:0002133,3.21e-14,2;UBERON:0004797,5.42e-09,7;UBERON:0002135,4.66e-08,1;UBERON:0002134,7.45e-08,1;UBERON:0005208,7.45e-08,1;UBERON:0005946,7.45e-08,1;UBERON:0005965,7.45e-08,1;UBERON:0002078,7.45e-08,1;UBERON:0002146,8.51e-08,1;UBERON:0005623,8.51e-08,1;UBERON:0001154,1.64e-07,1;UBERON:0001153,1.64e-07,1;UBERON:0001045,1.64e-07,1;UBERON:0000178,4.53e-07,15;UBERON:0000179,4.53e-07,15;UBERON:0000463,4.53e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.0764134057479513,0,0,0,1.53531759238885,0,0,0,0,0.46480320348181,0.710846162437108,0.293600439334847,0,0,0.434021741431704,0,0.32389366601898,0,0,0,0,0.464858073811369,0.822335776043652,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.449446968890169,0,0.641858054152187,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.79566670879636,0.182664153764634,0,0.546138611262131,0,0.853460445133014,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0,0,0.590129310341499,0.786021525498329,0.411202997999018,0.334372990781356,0.32592226663359,0,0,0.445641827540694,0.883817722424512,1.10766947291811,1.35401931882508,0.25618263945135,0.260118695119756,0.164437904603676,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0.339928028092699,0.766440987203842,0.34362744548263,0.506039384039006,0.318565414324097,0.651083453856419,1.90090408889675,0.301150238155546,0.383959833463255,2.49861453104692,0.710331756132051,0.821127996921047,1.00803371612366,1.33720097891754,0.724122019413995,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.715471872916026,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.408308342509787,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0.573609190778008,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,1.1240175325762,0,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0.264145302039678,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0.394061520403854,0.862510299438069,1.28343036279748,0,0,0,0,0.637938751653163,2.99602809578873,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,1.97333888981341,0.522870902049801,0,0,0,0.309123034943167,0.183138929636687,0.41254749960294,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.495854746082934,0.192190067365106,0.382838137483752,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0.962479855263359,0,0.185803175125719,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0.671028323677248,0.834245708559542,0,0.278406173895242,0,0,0.33307196799782,0,0,0.146508179271894,0,0.780103689942349,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0.398495976502139,1.10513566212459,0.251932747854276,0.102268682502155,0.369254416383208,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,2.43274371848694,2.06883333267483,0.219385397153973,0.32681539055697,0.278847488557207,0.307801034015188,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0.498635045700469,0.225595660617181,0.19606253431774,0,0.189753732724185,0.476809736941136,0,0,0.141353071433941,0,0,0.442287822516696,0,2.6686901581256,1.23563938946503,1.77517314159274,0.337005664903385,0,0,0.182454789215666,0,0,0,0,0.61214552326098,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0.581934098930517,0.0882561266915003,0,0,0,0.0633107959558787,0.195551382734803,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.410716136675979,1.27746588066972,0,0.788662062837943,1.95497680890578,1.3749625440701,1.43574604915363,0.399358000997982,0.429226048136571,1.78537165953498,2.01550417460179,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0.674921674654501,0,0.0607495566580247,0,0.551639951094387,0.209818352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| |||
|short_description=p19@RABGAP1L | |||
}} |
Latest revision as of 18:44, 18 September 2015
Short description: | p19@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_RABGAP1L_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENST00000457696_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.21e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
valve | 2.78e-20 | 3 |
cardiac mesenchyme | 2.78e-20 | 3 |
cardial valve | 2.78e-20 | 3 |
tunica intima | 2.78e-20 | 3 |
heart layer | 2.78e-20 | 3 |
endocardium | 2.78e-20 | 3 |
endocardial cushion | 2.78e-20 | 3 |
presumptive endocardium | 2.78e-20 | 3 |
atrioventricular valve | 3.21e-14 | 2 |
blood vessel layer | 5.42e-09 | 7 |
mitral valve | 4.66e-08 | 1 |
tricuspid valve | 7.45e-08 | 1 |
right atrium valve | 7.45e-08 | 1 |
outflow tract of atrium | 7.45e-08 | 1 |
outflow part of right atrium | 7.45e-08 | 1 |
right cardiac atrium | 7.45e-08 | 1 |
pulmonary valve | 8.51e-08 | 1 |
semi-lunar valve | 8.51e-08 | 1 |
vermiform appendix | 1.64e-07 | 1 |
caecum | 1.64e-07 | 1 |
midgut | 1.64e-07 | 1 |
blood | 4.53e-07 | 15 |
haemolymphatic fluid | 4.53e-07 | 15 |
organism substance | 4.53e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 6.52e-08 | 1 |
cutaneous T cell lymphoma | 6.52e-08 | 1 |
mycosis fungoides | 6.52e-08 | 1 |