FFCP PHASE1:Hg19::chr1:171238128..171238142,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:171238128..171238142,+ | |||
|coexpression_cluster_id=C659 | |||
|description=CAGE_peak_at_chr1:171238128..171238142,+ | |||
|id=chr1:171238128..171238142,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.26e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.44e-19;13!CL:0002549;8.48e-15;2!CL:0000188;2.82e-12;9!CL:0002521;2.47e-10;3!CL:0000594;5.24e-10;3!CL:0000511;8.12e-08;1!CL:0002625;8.12e-08;1!CL:0000216;8.12e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.50e-16,15;CL:0002549,8.49e-15,2;CL:0000188,2.82e-12,9;CL:0002521,2.31e-10,3;CL:0000594,4.79e-10,3;CL:0000511,6.19e-08,1;CL:0002625,6.19e-08,1;CL:0000216,6.19e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0010227;4.25e-08;1!UBERON:0010115;8.12e-08;1!UBERON:0005425;8.12e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-18!115;UBERON:0002616!1.75e-13!59;UBERON:0000955!6.04e-11!69;UBERON:0006238!6.04e-11!69;UBERON:0002346!6.96e-11!90;UBERON:0001049!2.10e-10!57;UBERON:0005068!2.10e-10!57;UBERON:0006241!2.10e-10!57;UBERON:0007135!2.10e-10!57;UBERON:0003075!5.05e-10!86;UBERON:0007284!5.05e-10!86;UBERON:0000073!5.17e-10!94;UBERON:0001016!5.17e-10!94;UBERON:0001017!1.39e-09!82;UBERON:0005743!1.89e-09!86;UBERON:0000153!3.36e-09!129;UBERON:0007811!3.36e-09!129;UBERON:0002780!6.58e-09!41;UBERON:0001890!6.58e-09!41;UBERON:0006240!6.58e-09!41;UBERON:0000924!7.75e-09!173;UBERON:0006601!7.75e-09!173;UBERON:0003080!1.41e-08!42;UBERON:0001893!3.20e-08!34;UBERON:0000033!3.36e-08!123;UBERON:0004121!3.82e-08!169;UBERON:0001869!5.31e-08!32;UBERON:0002791!1.47e-07!33;UBERON:0003056!7.20e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;8.48e-15;2!UBERON:0005358;8.48e-15;2!UBERON:0001886;8.48e-15;2!UBERON:0004086;8.48e-15;2!UBERON:0005282;8.48e-15;2!UBERON:0005281;8.48e-15;2!UBERON:0001134;2.38e-10;16!UBERON:0002036;2.38e-10;16!UBERON:0002190;2.47e-10;3!UBERON:0001013;3.50e-08;14!UBERON:0002079;4.25e-08;1!UBERON:0002363;8.12e-08;1!UBERON:0001136;8.12e-08;1!UBERON:0000941;8.12e-08;1!UBERON:0001343;8.12e-08;1!UBERON:0001785;8.12e-08;1!UBERON:0002464;8.12e-08;1!UBERON:0004904;8.12e-08;1!UBERON:0001021;8.12e-08;1!UBERON:0004910;8.12e-08;1!UBERON:0004813;8.12e-08;1!UBERON:0002385;2.72e-07;31!UBERON:0001015;2.72e-07;31!UBERON:0000383;2.72e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,8.49e-15,2;UBERON:0005358,8.49e-15,2;UBERON:0001886,8.49e-15,2;UBERON:0004086,8.49e-15,2;UBERON:0005282,8.49e-15,2;UBERON:0005281,8.49e-15,2;UBERON:0002190,2.31e-10,3;UBERON:0001013,3.44e-08,14;UBERON:0002079,3.58e-08,1;UBERON:0002363,5.40e-08,1;UBERON:0007645,5.40e-08,1;UBERON:0007647,5.40e-08,1;UBERON:0010115,5.40e-08,1;UBERON:0001136,6.19e-08,1;UBERON:0001343,6.19e-08,1;UBERON:0004910,6.19e-08,1;UBERON:0005154,6.19e-08,1;UBERON:0005295,6.19e-08,1;UBERON:0004813,6.19e-08,1;UBERON:0005297,6.19e-08,1;UBERON:0005294,6.19e-08,1;UBERON:0010141,6.19e-08,1;UBERON:0005891,6.19e-08,1;UBERON:0000941,7.59e-08,1;UBERON:0001785,7.59e-08,1;UBERON:0002464,7.59e-08,1;UBERON:0004904,7.59e-08,1;UBERON:0001021,7.59e-08,1;UBERON:0003902,7.59e-08,1;UBERON:0005425,7.59e-08,1 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,3.79031924056099,53.8042394091667,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87058623753643,2.30470369792,0,0,0,0,0,0,0,0.204154171254893,0,0.413303124703062,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0.500170521059677,0,0,0,0,0,1.50473049863859,0,1.03473071292505,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.290012154876366,0.770243085573222,1.22802939780904,0,9.66782203814463,1.45016693914229,0.596586391912706,11.3070685271356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.953150969619124,0,0.42793898803392,0,0,1.2591072030832,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,7.03239260505091,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0,0,0.230850775511391,0.455768223388005,0,0,0,0.31900115973192,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,1.76922422959766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969890164884194,0,0.677942222341597,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0,0,0.671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26410682021684,3.2589686222951,3.36980134439808,5.24596209135687,0,0.886068179966986,0.122026264901963,0.500763722825999,0,0.332787154610557,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.895528817321244,4.90797950679171,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,2.35885750512418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,2.02516545277025,0,0,0.127894371303652,0,0,0,0,0.425149840203366,0.743614585554013,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0.690359926060101,0,0.451261970095544,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0,0.548257766857182,0,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0.322944549180031,0.434523000071005,0,1.20929600728513,0.606351566874658,0,0.342233301085281,0.202056159043763,1.29099969706817,0.332660356546013,0,0,0,0,0,0,0,0,2.21401172950129,0 | |||
|short_description=p@chr1:171238128..171238142,+ | |||
}} |
Latest revision as of 00:18, 28 July 2015
Short description: | p@chr1:171238128..171238142, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:171238128..171238142, + |
Coexpression cluster: | C659_Adipocyte_mature_Mesenchymal_breast_heart_adipose_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.50e-16 | 15 |
fibroblast of choroid plexus | 8.49e-15 | 2 |
cell of skeletal muscle | 2.82e-12 | 9 |
subcutaneous fat cell | 2.31e-10 | 3 |
skeletal muscle satellite cell | 4.79e-10 | 3 |
androgen binding protein secreting cell | 6.19e-08 | 1 |
seminiferous tubule epithelial cell | 6.19e-08 | 1 |
Sertoli cell | 6.19e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 8.49e-15 | 2 |
ventricle of nervous system | 8.49e-15 | 2 |
choroid plexus | 8.49e-15 | 2 |
brain ventricle | 8.49e-15 | 2 |
ventricular system of brain | 8.49e-15 | 2 |
ventricular system of central nervous system | 8.49e-15 | 2 |
subcutaneous adipose tissue | 2.31e-10 | 3 |
adipose tissue | 3.44e-08 | 14 |
left cardiac atrium | 3.58e-08 | 1 |
dura mater | 5.40e-08 | 1 |
future meninx | 5.40e-08 | 1 |
ectomeninx | 5.40e-08 | 1 |
future dura mater | 5.40e-08 | 1 |
mesothelium | 6.19e-08 | 1 |
seminiferous tubule of testis | 6.19e-08 | 1 |
epithelium of male gonad | 6.19e-08 | 1 |
epithelial cord | 6.19e-08 | 1 |
sex cord | 6.19e-08 | 1 |
seminiferous tubule epithelium | 6.19e-08 | 1 |
testis sex cord | 6.19e-08 | 1 |
genital ridge | 6.19e-08 | 1 |
primitive sex cord of indifferent gonad | 6.19e-08 | 1 |
coelomic epithelium | 6.19e-08 | 1 |
cranial nerve II | 7.59e-08 | 1 |
cranial nerve | 7.59e-08 | 1 |
nerve trunk | 7.59e-08 | 1 |
nerve connecting eye with brain | 7.59e-08 | 1 |
nerve | 7.59e-08 | 1 |
retinal neural layer | 7.59e-08 | 1 |
presumptive neural retina | 7.59e-08 | 1 |