FFCP PHASE1:Hg19::chr1:160591733..160591736,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:160591733..160591736,- | |||
|coexpression_cluster_id=C1715 | |||
|description=CAGE_peak_at_chr1:160591733..160591736,- | |||
|id=chr1:160591733..160591736,- | |||
|ontology_enrichment_celltype=CL:0000838!1.75e-26!52;CL:0000542!7.38e-26!53;CL:0000051!7.38e-26!53;CL:0002087!1.05e-23!119;CL:0002031!2.28e-22!124;CL:0000738!4.48e-20!140;CL:0000945!2.15e-18!24;CL:0000826!2.15e-18!24;CL:0000988!2.62e-16!182;CL:0000037!1.41e-14!172;CL:0000566!1.41e-14!172;CL:0002032!1.66e-14!165;CL:0000837!1.66e-14!165;CL:0000084!7.95e-08!25;CL:0000827!7.95e-08!25;CL:0002057!3.25e-07!42;CL:0000785!9.36e-07!2;CL:0000955!9.36e-07!2;CL:0000818!9.36e-07!2;CL:0000954!9.36e-07!2;CL:0000816!9.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.31e-18;24!CL:0000946;2.74e-10;1!CL:0000786;2.74e-10;1!CL:0000542;1.25e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.40e-18,24;CL:0000826,6.40e-18,24;CL:0000838,6.49e-16,52;CL:0000542,1.38e-15,53;CL:0000051,1.38e-15,53;CL:0000946,4.75e-10,1;CL:0000786,4.75e-10,1;CL:0000980,4.75e-10,1;CL:0002087,1.05e-07,115;CL:0002031,2.57e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.25e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!9.19e-22!10 | |||
|ontology_enrichment_disease_v019=DOID:630;8.13e-11;1!DOID:0050177;8.13e-11;1!DOID:0050427;8.13e-11;1!DOID:0060060;2.74e-10;1!DOID:0060061;2.74e-10;1!DOID:8691;2.74e-10;1!DOID:0060058;1.30e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,8.95e-11,1;DOID:0050177,8.95e-11,1;DOID:0050427,8.95e-11,1;DOID:0060060,3.61e-10,1;DOID:0060061,3.61e-10,1;DOID:8691,3.61e-10,1;DOID:0060058,1.33e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.98e-08!102;UBERON:0003061!5.98e-08!102;UBERON:0002193!1.36e-07!112;UBERON:0004177!4.95e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;4.37e-08;5!UBERON:0005057;4.37e-08;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,1.80621296789881,2.59745578335141,0,0,0,0,0,0,0.0774672005803016,1.27952309238679,0,0,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,1.17903228824749,0,0.83593247695339,0,0,0,1.6711568532776,0,0.886135578334485,1.62482318259009,3.33037431286755,3.64166173167659,3.61763390128087,3.03985019564433,0.869409257205157,0,0.267540828089713,0,1.13309342697566,0,0.34362744548263,1.26509846009751,0.318565414324097,0,0,0,0.511946444617674,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,1.58625035258854,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21552649829925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0.208843899010911,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788617450012533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,1.59905849479886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.476128862927481,0.516711278688049,1.30356900021302,0,0,0.202117188958219,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,3.20568492303233 | |||
|short_description=p@chr1:160591733..160591736,- | |||
}} |
Latest revision as of 23:22, 27 July 2015
Short description: | p@chr1:160591733..160591736, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160591733..160591736, - |
Coexpression cluster: | C1715_CD4_xeroderma_B_splenic_thymus_b_non |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.40e-18 | 24 |
pro-B cell | 6.40e-18 | 24 |
lymphoid lineage restricted progenitor cell | 6.49e-16 | 52 |
lymphocyte | 1.38e-15 | 53 |
common lymphoid progenitor | 1.38e-15 | 53 |
antibody secreting cell | 4.75e-10 | 1 |
plasma cell | 4.75e-10 | 1 |
plasmablast | 4.75e-10 | 1 |
nongranular leukocyte | 1.05e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.57e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 8.95e-11 | 1 |
monogenic disease | 8.95e-11 | 1 |
xeroderma pigmentosum | 8.95e-11 | 1 |
non-Hodgkin lymphoma | 3.61e-10 | 1 |
cutaneous T cell lymphoma | 3.61e-10 | 1 |
mycosis fungoides | 3.61e-10 | 1 |
lymphoma | 1.33e-08 | 10 |