FFCP PHASE1:Hg19::chr1:160549235..160549303,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1704 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UIB8 | |||
|association_with_transcript=0bp_to_ENST00000311224,ENST00000360056,ENST00000368047,ENST00000368048,ENST00000368051,ENST00000368054,uc001fwf.3,uc001fwg.3,uc001fwh.3,uc001fwi.3,uc001fwj.2,uc001fwk.2,uc009wtn.2_5end | |||
|cluster_id=chr1:160549235..160549303,- | |||
|coexpression_cluster_id=C3892 | |||
|description=CAGE_peak_1_at_CD84_5end | |||
|id=chr1:160549235..160549303,- | |||
|ontology_enrichment_celltype=CL:0000037!1.74e-81!172;CL:0000566!1.74e-81!172;CL:0002032!8.21e-78!165;CL:0000837!8.21e-78!165;CL:0000988!4.39e-73!182;CL:0000738!7.95e-68!140;CL:0002031!8.00e-60!124;CL:0002087!1.60e-55!119;CL:0000763!1.00e-53!112;CL:0000049!1.00e-53!112;CL:0000766!1.67e-39!76;CL:0000557!5.48e-39!71;CL:0000839!1.39e-37!70;CL:0002009!5.54e-34!65;CL:0002194!1.07e-32!63;CL:0000576!1.07e-32!63;CL:0000040!1.07e-32!63;CL:0000559!1.07e-32!63;CL:0002057!1.62e-25!42;CL:0000860!2.86e-23!45;CL:0000542!8.98e-20!53;CL:0000051!8.98e-20!53;CL:0000838!2.74e-19!52;CL:0000134!9.80e-13!358;CL:0002320!1.49e-11!365;CL:0000791!3.59e-10!18;CL:0000789!3.59e-10!18;CL:0002420!3.59e-10!18;CL:0002419!3.59e-10!18;CL:0000790!3.59e-10!18;CL:0000945!9.00e-10!24;CL:0000826!9.00e-10!24;CL:0000084!1.24e-09!25;CL:0000827!1.24e-09!25;CL:0000625!9.08e-09!11;CL:0000219!7.27e-08!390;CL:0000451!8.15e-08!10;CL:0000236!1.53e-07!14;CL:0000990!1.93e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.13e-22;39!CL:0000234;1.13e-22;39!CL:0000860;1.38e-21;33!CL:0002057;1.38e-21;33!CL:0000576;6.17e-20;48!CL:0000766;1.84e-18;69!CL:0000763;2.85e-15;100!CL:0002087;3.12e-15;104!CL:0000738;6.47e-15;136!CL:0000988;3.01e-12;177!CL:0000542;1.42e-11;53!CL:0000791;1.67e-10;18!CL:0000789;1.67e-10;18!CL:0002419;1.67e-10;18!CL:0000945;4.53e-10;24!CL:0000625;5.09e-09;11!CL:0000084;1.08e-08;25!CL:0000451;5.08e-08;10!CL:0000990;1.26e-07;8!CL:0000236;1.79e-07;13!CL:0000235;6.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.44e-81,168;CL:0002032,1.94e-77,161;CL:0000837,1.94e-77,161;CL:0000988,1.15e-73,177;CL:0000738,1.47e-71,136;CL:0002031,2.51e-63,120;CL:0002087,7.70e-59,115;CL:0000763,2.43e-54,108;CL:0000049,2.43e-54,108;CL:0000766,3.39e-44,72;CL:0000557,7.86e-44,67;CL:0000839,2.58e-42,66;CL:0002009,1.57e-38,61;CL:0002194,3.47e-37,59;CL:0000576,3.47e-37,59;CL:0000040,3.47e-37,59;CL:0000559,3.47e-37,59;CL:0000473,9.89e-32,48;CL:0000234,9.89e-32,48;CL:0000860,2.52e-26,42;CL:0002057,2.52e-26,42;CL:0000542,3.75e-19,53;CL:0000051,3.75e-19,53;CL:0000838,1.17e-18,52;CL:0000134,3.53e-12,354;CL:0002320,4.57e-11,361;CL:0000791,1.72e-10,18;CL:0000789,1.72e-10,18;CL:0002420,1.72e-10,18;CL:0002419,1.72e-10,18;CL:0000790,1.72e-10,18;CL:0000945,4.24e-10,24;CL:0000826,4.24e-10,24;CL:0000625,5.19e-09,11;CL:0000084,1.07e-08,25;CL:0000827,1.07e-08,25;CL:0000451,5.01e-08,10;CL:0000236,9.64e-08,14;CL:0000990,1.22e-07,8;CL:0000219,2.04e-07,386;CL:0000235,6.11e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-19;42!CL:0000049;7.88e-15;108!CL:0000051;1.42e-11;53!CL:0000790;1.67e-10;18 | |||
|ontology_enrichment_disease=DOID:1240!6.45e-12!39;DOID:2531!2.66e-11!51;DOID:0060083!2.66e-11!51;DOID:8692!3.58e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.67e-08;31!DOID:1240;3.35e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.70e-08,31;DOID:1240,1.80e-08,39;DOID:2531,1.96e-08,51;DOID:0060083,1.96e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.79e-40!102;UBERON:0003061!1.79e-40!102;UBERON:0002193!5.40e-36!112;UBERON:0002371!4.37e-33!80;UBERON:0007023!9.23e-33!115;UBERON:0001474!1.43e-28!86;UBERON:0002405!1.76e-24!115;UBERON:0004765!3.66e-21!101;UBERON:0001434!3.66e-21!101;UBERON:0002384!1.94e-10!375;UBERON:0001049!2.12e-09!57;UBERON:0005068!2.12e-09!57;UBERON:0006241!2.12e-09!57;UBERON:0007135!2.12e-09!57;UBERON:0003081!2.09e-08!216;UBERON:0003080!1.25e-07!42;UBERON:0002780!2.19e-07!41;UBERON:0001890!2.19e-07!41;UBERON:0006240!2.19e-07!41;UBERON:0002616!4.47e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.75e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.84e-44,98;UBERON:0003061,4.84e-44,98;UBERON:0002193,3.07e-39,108;UBERON:0002371,2.11e-36,76;UBERON:0002405,6.40e-34,93;UBERON:0007023,5.77e-33,114;UBERON:0001474,1.72e-31,82;UBERON:0004765,4.68e-26,90;UBERON:0001434,2.30e-21,100;UBERON:0003081,4.42e-11,203;UBERON:0002384,4.91e-10,371;UBERON:0001049,1.59e-09,56;UBERON:0005068,1.59e-09,56;UBERON:0006241,1.59e-09,56;UBERON:0007135,1.59e-09,56;UBERON:0000073,1.68e-08,53;UBERON:0002616,1.68e-08,53;UBERON:0002780,1.20e-07,41;UBERON:0001890,1.20e-07,41;UBERON:0003080,1.20e-07,41;UBERON:0006240,1.20e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70627602516243,0,0,0,0,0,0,0,0,0,22.3891278841497,16.5022184794391,16.7653964198137,23.6018566109342,22.2621050896383,13.3141866051825,0,0,0,53.3749011998278,55.303831437607,31.1216465694938,28.2537658351257,28.8784004357004,17.3608696572681,412.004472601461,389.320186554813,487.590549531515,73.7169070612393,89.9344745979366,55.7943340731977,69.4962820347997,83.8782491564525,97.5575068319576,46.8938599485105,54.0499090776402,54.6273951042632,69.6386275087969,133.615329501852,90.735746018209,53.2725820905571,55.1270423116848,49.2144430934735,39.1787382234755,51.348644332175,38.9995646737415,49.1478437278207,46.8739595410835,41.3438008016713,17.7027635563436,26.0997203357924,21.7987787148451,63.8171609752128,49.0193943314989,69.2832414609322,19.3727840842678,54.8733677621471,29.1145396445614,18.167954622827,16.1579267973433,19.7079126777873,33.2492748193625,33.0389164251314,62.5222532251642,7.12531859353121,6.16641699317179,6.75857368929146,14.0796995569058,29.4914850081551,27.5747868697702,27.737464466823,22.4221752740167,33.9103939573145,33.0522436392431,24.8053976179195,27.891435486363,32.8852826047726,16.8200220375101,19.8256992868539,10.0891541336676,36.3470036989606,42.8827298848156,20.4365596629566,28.1674053629328,3.00935691703221,2.60737813306872,4.2610302516126,0,48.797780115706,33.5850734521314,44.9713806004751,81.2411591295047,16.7799628840634,27.3124629875744,16.2793525557639,15.4756009960075,7.82468331484642,11.7146384898028,13.1095005763959,22.9978152370949,24.1348899945816,48.2857821938421,53.6058814952903,87.7978331307675,64.0316482791434,58.5975108470777,55.1262185780057,29.6632984583212,42.8755147367302,74.9584359314075,77.1893841663495,63.2268557629206,44.7566969958906,44.1276323042787,31.5717200464502,0,0,0,0,0,0,0,0,0,0,0.43917392846563,8.77559805834675,0,0,168.440097306781,181.791445740435,126.177104532403,13.5939655854045,12.0118931263827,9.65789503456869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,15.511210565933,0,0,0,0,0,8.86670955495893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,5.89696330006576,12.4065880403095,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,507.453249546126,599.050918756448,421.369345088545,0,0,0,0,0,0,1429.21605313613,306.056356629974,183.278054138043,221.944728262121,216.000803592536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,329.600445537626,397.285359322812,571.359975999016,0,0,0,0,0,0,0,26.4021218670582,18.1127162881995,13.0909897005343,0,0,0,4.02039036802437,0,3.74503511973591,14.9580729602012,25.6937618330342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.9326146874592,21.5714200818617,26.0415241040404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7170728454642,10.7188534920209,0,0,0,11.2314702696017,0,0,0,0,0,0,0,0,0,0,0,0.681813019328807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,4.02181365321472,0,10.9206808901064,0,0,0,0,58.8639226709316,52.7599672928239,42.153891850888,54.5550765798337,52.2430086819467,40.8538186051412,54.0031437238115,48.3806357539505,0,0,0,27.4988699186064,34.3360726883939,0.355709216742071,8.92787127281405,51.6910572010995,18.9590316431043,0.846694330895531,0,39.0308077577708,13.009376704892,3.13359791546046,20.0507581672054,12.0197162239138,4.33587802779989,25.2249633988809,57.9150883258844,29.19795430424,41.1702624173334,47.866687088977,45.549815687351,41.6176643206346,6.12493582569533,16.0013618632026,53.5502243382447,0.33307196799782,47.9355817298688,0,44.8315028571996,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0,8.94732882989668,12.3789086441251,0,0,0,8.96615947129814,45.8631299781705,0,0,24.740045897675,0,0,0,0.511572370226872,10.7521312144258,7.18449277040819,0,9.69332746095218,9.09127361986142,1.99613798001194,0,0,10.1499940560871,0,0,0,0,0,0,13.2861207872076,6.99459344027366,1.52581736317083,3.20679853800551,2.65992857058193,5.04586413454137,0,0,6.92552326534174,0,0,0,0,4.78501739597879,1.74035427463538,15.991043280559,6.13159789174419,67.6584905062557,105.045782960899,0.451191321234361,1.17637520590644,1.34257269580674,0.75901493089674,74.700192120778,0,0,0,0,6.96683351754953,10.172619917884,6.11030144933625,0,0,0,23.792599942179,5.61804353109152,10.3076356119149,9.48764903921463,0,0,24.8588173795116,4.83962864194656,3.36680037793539,48.6536663139357,0,0,0,0,0,0,0,0,0,0,0,14.6770401323305,0,0.0967563312890851,0,0,7.46815426960829,0,3.16373037092745,0,0,9.55993018933768,0,0,14.7282566370153,0,0,0,0,0,0,0,0,0,0,0,14.4100869290349,15.6072131936872,48.5437034654495,0,6.57218385698286,11.1712960508902,6.87481272035051,2.87149209830726,2.39614800598789,5.57993862577542,3.34757186162809,3.35917362433631,0,0,0,0,0,0,0,12.7236750369489,15.2547814844965,0,0,0,68.6170369232076,26.3092664549703,10.50967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| |||
|short_description=p1@CD84 | |||
}} |
Latest revision as of 02:33, 18 September 2015
Short description: | p1@CD84 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD84_5end |
Coexpression cluster: | C3892_Mast_Macrophage_Monocytederived_CD14_Dendritic_acute_chronic |
Association with transcript: | 0bp_to_ENST00000311224, ENST00000360056, ENST00000368047, ENST00000368048, ENST00000368051, ENST00000368054, uc001fwf.3, uc001fwg.3, uc001fwh.3, uc001fwi.3, uc001fwj.2, uc001fwk.2, uc009wtn.2_5end |
EntrezGene: | CD84 |
HGNC: | 1704 |
UniProt: | Q9UIB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.84e-44 | 98 |
blood island | 4.84e-44 | 98 |
hemolymphoid system | 3.07e-39 | 108 |
bone marrow | 2.11e-36 | 76 |
immune system | 6.40e-34 | 93 |
adult organism | 5.77e-33 | 114 |
bone element | 1.72e-31 | 82 |
skeletal element | 4.68e-26 | 90 |
skeletal system | 2.30e-21 | 100 |
lateral plate mesoderm | 4.42e-11 | 203 |
connective tissue | 4.91e-10 | 371 |
neural tube | 1.59e-09 | 56 |
neural rod | 1.59e-09 | 56 |
future spinal cord | 1.59e-09 | 56 |
neural keel | 1.59e-09 | 56 |
regional part of nervous system | 1.68e-08 | 53 |
regional part of brain | 1.68e-08 | 53 |
regional part of forebrain | 1.20e-07 | 41 |
forebrain | 1.20e-07 | 41 |
anterior neural tube | 1.20e-07 | 41 |
future forebrain | 1.20e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.70e-08 | 31 |
leukemia | 1.80e-08 | 39 |
hematologic cancer | 1.96e-08 | 51 |
immune system cancer | 1.96e-08 | 51 |