FFCP PHASE1:Hg19::chr1:157108130..157108173,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2117 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3492 | |||
|TSSclassifier=strong | |||
|UniProt=P41162 | |||
|association_with_transcript=0bp_to_ENST00000368192_5end | |||
|cluster_id=chr1:157108130..157108173,- | |||
|coexpression_cluster_id=C681 | |||
|description=CAGE_peak_1_at_ETV3_5end | |||
|id=chr1:157108130..157108173,- | |||
|ontology_enrichment_celltype=CL:0002057!3.40e-24!42;CL:0000738!1.44e-21!140;CL:0000766!3.12e-21!76;CL:0000860!3.74e-20!45;CL:0000557!1.36e-18!71;CL:0002009!2.48e-17!65;CL:0000839!4.28e-17!70;CL:0002194!3.64e-16!63;CL:0000576!3.64e-16!63;CL:0000040!3.64e-16!63;CL:0000559!3.64e-16!63;CL:0002031!5.46e-15!124;CL:0002087!4.09e-14!119;CL:0000037!4.80e-14!172;CL:0000566!4.80e-14!172;CL:0000763!2.10e-13!112;CL:0000049!2.10e-13!112;CL:0002032!1.28e-12!165;CL:0000837!1.28e-12!165;CL:0000988!4.31e-12!182;CL:0000451!3.05e-08!10;CL:0000990!3.64e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.34e-20;33!CL:0002057;9.34e-20;33!CL:0000473;6.01e-15;39!CL:0000234;6.01e-15;39!CL:0000576;6.98e-13;48!CL:0000766;1.27e-10;69!CL:0000451;2.64e-08;10!CL:0000990;3.23e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.23e-24,72;CL:0000860,3.40e-24,42;CL:0002057,3.40e-24,42;CL:0000738,1.11e-23,136;CL:0000473,4.01e-22,48;CL:0000234,4.01e-22,48;CL:0000557,1.33e-21,67;CL:0002009,2.20e-20,61;CL:0000839,5.80e-20,66;CL:0002194,3.89e-19,59;CL:0000576,3.89e-19,59;CL:0000040,3.89e-19,59;CL:0000559,3.89e-19,59;CL:0002031,8.66e-17,120;CL:0002087,6.88e-16,115;CL:0000037,1.82e-15,168;CL:0000763,3.50e-15,108;CL:0000049,3.50e-15,108;CL:0002032,5.58e-14,161;CL:0000837,5.58e-14,161;CL:0000988,1.76e-13,177;CL:0000451,3.05e-08,10;CL:0000990,3.64e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.66e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.38e-18!102;UBERON:0003061!6.38e-18!102;UBERON:0002193!5.16e-17!112;UBERON:0002371!5.97e-15!80;UBERON:0001474!4.81e-14!86;UBERON:0004765!5.03e-11!101;UBERON:0001434!5.03e-11!101;UBERON:0002405!2.49e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.25e-20,98;UBERON:0003061,3.25e-20,98;UBERON:0002193,4.25e-19,108;UBERON:0002371,2.47e-17,76;UBERON:0002405,8.21e-17,93;UBERON:0001474,3.21e-16,82;UBERON:0004765,2.67e-15,90;UBERON:0001434,3.52e-12,100 | |||
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| |||
|short_description=p1@ETV3 | |||
}} |
Latest revision as of 18:54, 17 September 2015
Short description: | p1@ETV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ETV3_5end |
Coexpression cluster: | C681_immature_CD14_migratory_CD34_Eosinophils_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000368192_5end |
EntrezGene: | ETV3 |
HGNC: | 3492 |
UniProt: | P41162 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.23e-24 | 72 |
classical monocyte | 3.40e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.40e-24 | 42 |
leukocyte | 1.11e-23 | 136 |
defensive cell | 4.01e-22 | 48 |
phagocyte | 4.01e-22 | 48 |
granulocyte monocyte progenitor cell | 1.33e-21 | 67 |
macrophage dendritic cell progenitor | 2.20e-20 | 61 |
myeloid lineage restricted progenitor cell | 5.80e-20 | 66 |
monopoietic cell | 3.89e-19 | 59 |
monocyte | 3.89e-19 | 59 |
monoblast | 3.89e-19 | 59 |
promonocyte | 3.89e-19 | 59 |
hematopoietic lineage restricted progenitor cell | 8.66e-17 | 120 |
nongranular leukocyte | 6.88e-16 | 115 |
hematopoietic stem cell | 1.82e-15 | 168 |
myeloid cell | 3.50e-15 | 108 |
common myeloid progenitor | 3.50e-15 | 108 |
hematopoietic oligopotent progenitor cell | 5.58e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.58e-14 | 161 |
hematopoietic cell | 1.76e-13 | 177 |
dendritic cell | 3.05e-08 | 10 |
conventional dendritic cell | 3.64e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.25e-20 | 98 |
blood island | 3.25e-20 | 98 |
hemolymphoid system | 4.25e-19 | 108 |
bone marrow | 2.47e-17 | 76 |
immune system | 8.21e-17 | 93 |
bone element | 3.21e-16 | 82 |
skeletal element | 2.67e-15 | 90 |
skeletal system | 3.52e-12 | 100 |