FFCP PHASE1:Hg19::chr1:155851235..155851251,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:155851235..155851251,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr1:155851235..155851251,+ | |||
|id=chr1:155851235..155851251,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.89e-08;4!CL:0002222;1.89e-08;4!CL:0002224;1.89e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.82e-08,4;CL:0002222,1.82e-08,4;CL:0002224,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.04e-10;3!UBERON:0003057;1.04e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.98e-34!57;UBERON:0005068!2.98e-34!57;UBERON:0006241!2.98e-34!57;UBERON:0007135!2.98e-34!57;UBERON:0000073!4.73e-32!94;UBERON:0001016!4.73e-32!94;UBERON:0005743!1.71e-31!86;UBERON:0001017!5.42e-31!82;UBERON:0002616!1.25e-28!59;UBERON:0002780!3.71e-28!41;UBERON:0001890!3.71e-28!41;UBERON:0006240!3.71e-28!41;UBERON:0003075!1.30e-27!86;UBERON:0007284!1.30e-27!86;UBERON:0000955!1.49e-27!69;UBERON:0006238!1.49e-27!69;UBERON:0003080!3.16e-27!42;UBERON:0002020!1.82e-26!34;UBERON:0003528!1.82e-26!34;UBERON:0001893!4.13e-26!34;UBERON:0002346!1.23e-25!90;UBERON:0002791!5.41e-25!33;UBERON:0001869!1.04e-23!32;UBERON:0003056!2.84e-23!61;UBERON:0000033!7.15e-21!123;UBERON:0004121!1.35e-20!169;UBERON:0000956!1.39e-20!25;UBERON:0000203!1.39e-20!25;UBERON:0000153!6.85e-20!129;UBERON:0007811!6.85e-20!129;UBERON:0002619!1.03e-19!22;UBERON:0000924!1.24e-19!173;UBERON:0006601!1.24e-19!173;UBERON:0001950!4.02e-17!20;UBERON:0007023!6.54e-12!115;UBERON:0000475!1.19e-09!365;UBERON:0000200!1.86e-09!6;UBERON:0000025!1.04e-08!194;UBERON:0003076!3.48e-08!15;UBERON:0003057!3.48e-08!15;UBERON:0001872!3.64e-08!5;UBERON:0004111!6.54e-08!241;UBERON:0000477!1.40e-07!286;UBERON:0000483!1.79e-07!309;UBERON:0002308!2.53e-07!9;UBERON:0000125!2.53e-07!9;UBERON:0000119!3.20e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;6.80e-20;6!UBERON:0002771;1.15e-15;2!UBERON:0001954;1.43e-15;2!UBERON:0003022;1.43e-15;2!UBERON:0002421;1.43e-15;2!UBERON:0002600;1.43e-15;2!UBERON:0001897;2.21e-15;2!UBERON:0002702;2.21e-15;2!UBERON:0010225;2.21e-15;2!UBERON:0002619;7.52e-12;22!UBERON:0001870;1.04e-10;3!UBERON:0002240;1.04e-10;3!UBERON:0005174;1.04e-10;3!UBERON:0001137;1.04e-10;3!UBERON:0000956;1.45e-10;25!UBERON:0000203;1.45e-10;25!UBERON:0010077;1.89e-08;4!UBERON:0005389;1.89e-08;4!UBERON:0000484;1.89e-08;4!UBERON:0000965;1.89e-08;4!UBERON:0001803;1.89e-08;4!UBERON:0002784;2.35e-08;4!UBERON:0003528;2.44e-08;34!UBERON:0002791;2.44e-08;32!UBERON:0002020;2.44e-08;34!UBERON:0001869;2.44e-08;32!UBERON:0001893;1.94e-07;34!UBERON:0000349;5.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,5.89e-20,6;UBERON:0002771,1.15e-15,2;UBERON:0001954,1.54e-15,2;UBERON:0003022,1.54e-15,2;UBERON:0002421,1.54e-15,2;UBERON:0002600,1.54e-15,2;UBERON:0002702,1.78e-15,2;UBERON:0001897,2.05e-15,2;UBERON:0010225,2.05e-15,2;UBERON:0001049,9.32e-13,56;UBERON:0005068,9.32e-13,56;UBERON:0006241,9.32e-13,56;UBERON:0007135,9.32e-13,56;UBERON:0003075,1.55e-12,82;UBERON:0007284,1.55e-12,82;UBERON:0002346,5.68e-12,86;UBERON:0002619,7.25e-12,22;UBERON:0003056,8.32e-12,61;UBERON:0002780,2.53e-11,41;UBERON:0001890,2.53e-11,41;UBERON:0003080,2.53e-11,41;UBERON:0006240,2.53e-11,41;UBERON:0001870,8.99e-11,3;UBERON:0002240,1.20e-10,3;UBERON:0005174,1.20e-10,3;UBERON:0001137,1.20e-10,3;UBERON:0000956,1.40e-10,25;UBERON:0000203,1.40e-10,25;UBERON:0010371,5.90e-10,104;UBERON:0000073,6.55e-09,53;UBERON:0002616,6.55e-09,53;UBERON:0001017,7.39e-09,81;UBERON:0002791,1.77e-08,32;UBERON:0001869,1.77e-08,32;UBERON:0010077,1.82e-08,4;UBERON:0005389,1.82e-08,4;UBERON:0000484,1.82e-08,4;UBERON:0002546,1.82e-08,4;UBERON:0000965,1.82e-08,4;UBERON:0001803,1.82e-08,4;UBERON:0003073,1.82e-08,4;UBERON:0005426,1.82e-08,4;UBERON:0002784,2.26e-08,4;UBERON:0003528,4.96e-08,34;UBERON:0002020,4.96e-08,34;UBERON:0001893,4.96e-08,34;UBERON:0001016,5.13e-08,89;UBERON:0010314,6.84e-08,132;UBERON:0000349,5.38e-07,5;UBERON:0000955,5.75e-07,68;UBERON:0006238,5.75e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0.502170558379211,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0,0,0.600182192168805,0,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88662684050547,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0.254094624222463,0,0,0.837581326671744,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.60298219312704,0,0.442317039724898,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0.0882561266915003,0.451961481561065,0.137041924646751,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.0846733320657845,2.38568906942791,0.544813624446302,0.160753148465019,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,6.46739203980405,0.500763722825999,0,0.443716206147409,0.310482014706917,0,0,0,0.285465333544967,0,0.468334905806882,0.28984205722165,0.298509605773748,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0.215649622793364,0,0.218419276384028,0,0,0,0,0.318004350653419,0,0,0,0,0.513833800771676,0,0,0.41023272848151,0.504143392443436,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0.781078098613847,0.413373593002368,0.570742291745161,0.546974809018219,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0.230467975111559,0,0.203909198930495,0.855046056317038,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.475680363110274,0,0,0,0,0.437119121007915,0.470317296361523,0,0,1.17785080268967,0,0.8453114551668,0,0.0939839179798536,0,0,0,0,0,0,0,0.860037498908708,0,0.475940431336403,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.930896962757057,0,0,0,0,0.112131862580613,0.12729431655633,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr1:155851235..155851251,+ | |||
}} |
Latest revision as of 22:21, 27 July 2015
Short description: | p@chr1:155851235..155851251, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:155851235..155851251, + |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.82e-08 | 4 |
vertebrate lens cell | 1.82e-08 | 4 |
lens epithelial cell | 1.82e-08 | 4 |