FFCP PHASE1:Hg19::chr8:93115584..93115642,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:93115584..93115642,-
|short_description=p5@RUNX1T1
|description=CAGE_peak_5_at_RUNX1T1_5end
|association_with_transcript=-70bp_to_ENST00000518832_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=862 | |EntrezGene=862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |HGNC=1535 | ||
|TSSclassifier=strong | |||
|UniProt=E5RH72 | |UniProt=E5RH72 | ||
|association_with_transcript=-70bp_to_ENST00000518832_5end | |||
|cluster_id=chr8:93115584..93115642,- | |||
|description=CAGE_peak_5_at_RUNX1T1_5end | |||
|id=chr8:93115584..93115642,- | |||
|ontology_enrichment_celltype=CL:0000057!1.71e-11!75;CL:0000055!1.76e-09!180;CL:0002620!1.21e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.09e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.41e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.19e-21!94;UBERON:0001016!1.19e-21!94;UBERON:0007023!4.42e-21!115;UBERON:0001017!2.17e-20!82;UBERON:0005743!2.40e-20!86;UBERON:0000955!3.46e-17!69;UBERON:0006238!3.46e-17!69;UBERON:0001049!6.72e-17!57;UBERON:0005068!6.72e-17!57;UBERON:0006241!6.72e-17!57;UBERON:0007135!6.72e-17!57;UBERON:0002616!4.47e-16!59;UBERON:0004121!6.37e-16!169;UBERON:0003075!3.25e-15!86;UBERON:0007284!3.25e-15!86;UBERON:0000924!5.01e-15!173;UBERON:0006601!5.01e-15!173;UBERON:0000153!1.59e-14!129;UBERON:0007811!1.59e-14!129;UBERON:0000033!2.01e-14!123;UBERON:0002346!7.25e-14!90;UBERON:0003080!3.04e-12!42;UBERON:0002780!9.05e-12!41;UBERON:0001890!9.05e-12!41;UBERON:0006240!9.05e-12!41;UBERON:0000475!3.27e-11!365;UBERON:0000468!5.45e-11!659;UBERON:0003056!8.07e-11!61;UBERON:0002020!2.29e-09!34;UBERON:0003528!2.29e-09!34;UBERON:0001893!4.53e-09!34;UBERON:0001869!7.81e-09!32;UBERON:0002791!8.04e-09!33;UBERON:0000467!5.03e-08!625;UBERON:0001950!5.82e-08!20;UBERON:0000480!6.86e-08!626;UBERON:0000956!1.35e-07!25;UBERON:0000203!1.35e-07!25;UBERON:0000119!1.44e-07!312;UBERON:0002619!1.46e-07!22;UBERON:0000477!3.14e-07!286;UBERON:0000483!3.15e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.54e-07;41!UBERON:0001890;2.54e-07;41!UBERON:0000922;5.39e-07;49!UBERON:0000073;7.49e-07;53!UBERON:0002616;7.49e-07;53!UBERON:0001869;9.01e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.07e-16,89;UBERON:0001017,2.72e-14,81;UBERON:0007023,1.10e-13,114;UBERON:0001049,2.67e-12,56;UBERON:0005068,2.67e-12,56;UBERON:0006241,2.67e-12,56;UBERON:0007135,2.67e-12,56;UBERON:0004121,5.15e-12,171;UBERON:0000924,5.15e-12,171;UBERON:0006601,5.15e-12,171;UBERON:0000955,1.35e-11,68;UBERON:0006238,1.35e-11,68;UBERON:0000073,2.26e-11,53;UBERON:0002616,2.26e-11,53;UBERON:0003075,2.95e-11,82;UBERON:0007284,2.95e-11,82;UBERON:0002346,3.78e-10,86;UBERON:0010371,1.94e-09,104;UBERON:0010314,1.02e-08,132;UBERON:0002780,1.50e-08,41;UBERON:0001890,1.50e-08,41;UBERON:0003080,1.50e-08,41;UBERON:0006240,1.50e-08,41;UBERON:0011216,1.55e-08,223;UBERON:0003056,7.84e-08,61;UBERON:0003528,3.05e-07,34;UBERON:0002020,3.05e-07,34;UBERON:0001869,5.26e-07,32;UBERON:0001893,6.15e-07,34 | |||
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| ||
|short_description=p5@RUNX1T1 | |||
}} | }} |
Latest revision as of 12:00, 19 September 2015
Short description: | p5@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RUNX1T1_5end |
Coexpression cluster: | NA |
Association with transcript: | -70bp_to_ENST00000518832_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | E5RH72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.41e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.07e-16 | 89 |
central nervous system | 2.72e-14 | 81 |
adult organism | 1.10e-13 | 114 |
neural tube | 2.67e-12 | 56 |
neural rod | 2.67e-12 | 56 |
future spinal cord | 2.67e-12 | 56 |
neural keel | 2.67e-12 | 56 |
ectoderm-derived structure | 5.15e-12 | 171 |
ectoderm | 5.15e-12 | 171 |
presumptive ectoderm | 5.15e-12 | 171 |
brain | 1.35e-11 | 68 |
future brain | 1.35e-11 | 68 |
regional part of nervous system | 2.26e-11 | 53 |
regional part of brain | 2.26e-11 | 53 |
neural plate | 2.95e-11 | 82 |
presumptive neural plate | 2.95e-11 | 82 |
neurectoderm | 3.78e-10 | 86 |
ecto-epithelium | 1.94e-09 | 104 |
structure with developmental contribution from neural crest | 1.02e-08 | 132 |
regional part of forebrain | 1.50e-08 | 41 |
forebrain | 1.50e-08 | 41 |
anterior neural tube | 1.50e-08 | 41 |
future forebrain | 1.50e-08 | 41 |
organ system subdivision | 1.55e-08 | 223 |
pre-chordal neural plate | 7.84e-08 | 61 |
brain grey matter | 3.05e-07 | 34 |
gray matter | 3.05e-07 | 34 |
cerebral hemisphere | 5.26e-07 | 32 |
telencephalon | 6.15e-07 | 34 |