FFCP PHASE1:Hg19::chr1:147374915..147374932,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2703 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4281 | |||
|TSSclassifier=strong | |||
|UniProt=P48165 | |||
|association_with_transcript=-3bp_to_uc001epu.1_5end | |||
|cluster_id=chr1:147374915..147374932,+ | |||
|coexpression_cluster_id=C369 | |||
|description=CAGE_peak_1_at_GJA8_5end | |||
|id=chr1:147374915..147374932,+ | |||
|ontology_enrichment_celltype=CL:0000306!3.29e-23!4;CL:0002222!3.29e-23!4;CL:0002224!3.29e-23!4;CL:0000062!7.16e-09!11;CL:0000375!7.16e-09!11;CL:0000335!7.16e-09!11;CL:0000075!4.76e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000306;5.56e-26;4!CL:0002222;5.56e-26;4!CL:0002224;5.56e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,5.56e-26,4;CL:0002222,5.56e-26,4;CL:0002224,5.56e-26,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0010077!3.29e-23!4;UBERON:0005389!3.29e-23!4;UBERON:0000484!3.29e-23!4;UBERON:0002546!3.29e-23!4;UBERON:0000965!3.29e-23!4;UBERON:0001803!3.29e-23!4;UBERON:0003073!3.29e-23!4;UBERON:0005426!3.29e-23!4;UBERON:0000076!3.95e-12!8;UBERON:0000970!1.04e-10!20;UBERON:0002104!3.15e-10!21;UBERON:0000020!2.15e-09!23;UBERON:0007625!4.43e-09!11;UBERON:0001032!5.00e-09!24;UBERON:0004456!5.00e-09!24;UBERON:0001801!2.52e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;5.56e-26;4!UBERON:0005389;5.56e-26;4!UBERON:0000484;5.56e-26;4!UBERON:0000965;5.56e-26;4!UBERON:0001803;5.56e-26;4!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24!UBERON:0007625;2.16e-10;11!UBERON:0001801;1.86e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,5.56e-26,4;UBERON:0005389,5.56e-26,4;UBERON:0000484,5.56e-26,4;UBERON:0002546,5.56e-26,4;UBERON:0000965,5.56e-26,4;UBERON:0001803,5.56e-26,4;UBERON:0003073,5.56e-26,4;UBERON:0005426,5.56e-26,4;UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24;UBERON:0000076,9.39e-14,8;UBERON:0007625,2.16e-10,11;UBERON:0001801,1.86e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0393633611772,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19755703795225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@GJA8 | |||
}} |
Latest revision as of 19:46, 16 September 2015
Short description: | p1@GJA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GJA8_5end |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | -3bp_to_uc001epu.1_5end |
EntrezGene: | GJA8 |
HGNC: | 4281 |
UniProt: | P48165 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 5.56e-26 | 4 |
vertebrate lens cell | 5.56e-26 | 4 |
lens epithelial cell | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 5.56e-26 | 4 |
transparent eye structure | 5.56e-26 | 4 |
simple cuboidal epithelium | 5.56e-26 | 4 |
cranial placode | 5.56e-26 | 4 |
lens of camera-type eye | 5.56e-26 | 4 |
epithelium of lens | 5.56e-26 | 4 |
lens placode | 5.56e-26 | 4 |
lens vesicle | 5.56e-26 | 4 |
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |
external ectoderm | 9.39e-14 | 8 |
pigment epithelium of eye | 2.16e-10 | 11 |
anterior segment of eyeball | 1.86e-08 | 14 |