FFCP PHASE1:Hg19::chr1:13910479..13910490,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10630 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29602 | |||
|TSSclassifier=strong | |||
|UniProt=E7ETC6 | |||
|association_with_transcript=-97bp_to_ENST00000509009_5end | |||
|cluster_id=chr1:13910479..13910490,+ | |||
|description=CAGE_peak_2_at_PDPN_5end | |||
|id=chr1:13910479..13910490,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002166;9.79e-11;3!CL:0000135;1.45e-09;3!CL:0002621;1.45e-09;3!CL:0000388;1.45e-09;3!CL:0000622;2.23e-09;5!CL:0002619;3.36e-09;3!CL:0000154;8.01e-08;6!CL:0002195;3.36e-07;2!CL:0002571;3.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,8.02e-11,3;CL:0000622,2.10e-09,5;CL:0002621,2.28e-09,3;CL:0000135,2.64e-09,3;CL:0000388,2.64e-09,3;CL:0002619,3.24e-09,3;CL:0000154,7.62e-08,6;CL:0002195,2.18e-07,2;CL:0002571,2.18e-07,2;CL:0000317,5.03e-07,2;CL:1000448,5.03e-07,2;CL:0002308,5.03e-07,2;CL:0002140,5.03e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.27e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.01e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.99e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!8.35e-10!659;UBERON:0000467!1.90e-09!625;UBERON:0000480!2.42e-09!626;UBERON:0004121!4.70e-09!169;UBERON:0000922!6.65e-09!612;UBERON:0000924!6.90e-09!173;UBERON:0006601!6.90e-09!173;UBERON:0000033!2.19e-08!123;UBERON:0000153!2.26e-08!129;UBERON:0007811!2.26e-08!129;UBERON:0000923!2.41e-08!604;UBERON:0005291!2.41e-08!604;UBERON:0006598!2.41e-08!604;UBERON:0002532!2.41e-08!604;UBERON:0002050!3.02e-08!605;UBERON:0005423!3.02e-08!605;UBERON:0005743!2.96e-07!86;UBERON:0000062!4.59e-07!511;UBERON:0000064!8.64e-07!219;UBERON:0003075!9.25e-07!86;UBERON:0007284!9.25e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.45e-09;3!UBERON:0000043;1.45e-09;3!UBERON:0007845;1.45e-09;3!UBERON:0001949;1.45e-09;3!UBERON:0003688;1.95e-08;6!UBERON:0002358;1.95e-08;6!UBERON:0003684;1.95e-08;6!UBERON:0001178;1.95e-08;6!UBERON:0004457;2.95e-08;9!UBERON:0000042;2.95e-08;9!UBERON:0000486;3.38e-08;12!UBERON:0001708;3.91e-08;4!UBERON:0008895;3.91e-08;4!UBERON:0003929;4.15e-07;7!UBERON:0005406;4.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.28e-09,3;UBERON:0007846,2.64e-09,3;UBERON:0000043,2.64e-09,3;UBERON:0007845,2.64e-09,3;UBERON:0003688,1.37e-08,6;UBERON:0002358,1.37e-08,6;UBERON:0003684,1.37e-08,6;UBERON:0001178,1.37e-08,6;UBERON:0001708,3.38e-08,4;UBERON:0008895,3.38e-08,4;UBERON:0005406,2.55e-07,2;UBERON:0002419,5.03e-07,2;UBERON:0007771,5.03e-07,2;UBERON:0003297,5.03e-07,2;UBERON:0001821,5.03e-07,2;UBERON:0003487,5.03e-07,2;UBERON:0001820,5.03e-07,2;UBERON:0005089,5.03e-07,2;UBERON:0005088,5.03e-07,2 | |||
|phase1_expression=0.181678379270557,0.642301571672949,5.07435854745496,0,2.68176656656373,1.74467704820074,0,0,0.783556884599516,0.245733936501509,0,1.74753097704138,0.791300934685361,0,0,0,0,0.730310090387373,0.487932798790507,0.61560529038394,0.204000691244253,0.313454721478088,1.14494394852423,0.547497700291537,0.125542639594803,0,0,0,0,0,0,2.75826367343678,0.90361775633475,0,0,0,0,0,0,0,1.11957737119962,1.94336199611388,1.28787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.579386075843295,11.9292892057665,7.78615792484217,0.0945348171640679,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,5.23678112241891,2.28081631715554,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.397227542439656,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0,0,0.438977620880838,0,0.45071417671979,0,0,0.427114777637135,0,0,0.309157587715317,0,0,0,0.0974370051611986,0,0.184099797284599,0.484938170456436,0,0,0,2.89891279744945,1.09098448236334,1.14721838155602,0.365921118388786,0,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0.548751427043128,0,0.603173834469785,1.11106134190236,0,0,0,0.115930404975077,0.234817388471643,3.89789408954899,2.77791307545966,2.09279567458058,0,0,0,0.234004265139238,0.148631162288728,5.62403003920662,4.87148171776693,2.83550194484773,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.517086863031111,0,0,1.86156681609409,0,0,0,0,3.86040582876998,0,0,0,1.77695974371273,0,2.1100756394171,0.871533458600294,1.3996218765488,0,0,0,0,0,0,0,0,0.716243852959582,0,0,0,0,2.28685161800217,0,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,1.5119514666484,0.248107807818777,0,0,1.79394808957981,1.53512174720011,0.64341568457443,2.96836132889982,0,0,0.246381468041427,0,0,0,2.6065841139427,0,1.37777337797528,0.364182336013434,1.31124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0.103041011647722,0,0,1.72279661398852,1.95018073810956,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.178064071293475,2.80984356113663,1.72971060628596,0.255225424989168,0.10115778085555,0,2.83331112147576,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,1.97859703341646,1.37268514868027,0.471249609382746,0,0,0.421258456238981,0.48763373908959,0,0,0.272999822815972,0.282810863907425,0,0,1.32687795048244,0,0,0.655894752046633,0,0,0,0,0,0,0,1.05553817648832,0.329294892959902,0,0,0.192444225451024,0.670302275535787,0,0,1.72202149068492,1.68471475667626,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0.422008249231538,0.111308705022906,0,0,0,0,0,2.86352311006033,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.692552326534174,0.227884111694002,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0.300646838828985,0,0,0,0,0,0,0,0,0.293977192243133,0.174118413160805,0,0,0,0,0,0.290967049465258,0,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.182248669974074,0,0,0.157363764404994,0,0,0,0.714695326373367,0,0,1.08599920350743,0.864221491201268,0.326587360109409,0,0,0,0.113312091520126,0,0,0.517131825446202,0.13223260174269,0,0,0.533937062838473,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0.434674820589684,0.276697269872462,0,0,0,0,0,0,0,0.934853239388898,0,1.32582103692562,0.50313580350515,2.66943366478961,0,0.151230923763239,0,0.443565449968902,0.955780602982214,3.14862178514523,1.70789252563885,0,0.797525143673985,0.521745061811734,5.40927392389986,2.66563648518157,2.84809513243263,0.363697318405119,3.00749559718968,0.464033759878494,0.398095888698616,0,0,0,0,0.192619830407303,0.214441591374926,0.521988583930423,0,0.231522474323834,0,0,0,0,0,0.771656153083659,0.506827321959218,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4499638188256,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0.392590874004102,0,0,0,0,0,0,0.376051641746286,1.21023041222112,0,0,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| |||
|short_description=p2@PDPN | |||
}} |
Latest revision as of 15:46, 16 September 2015
Short description: | p2@PDPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDPN_5end |
Coexpression cluster: | NA |
Association with transcript: | -97bp_to_ENST00000509009_5end |
EntrezGene: | PDPN |
HGNC: | 29602 |
UniProt: | E7ETC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 8.02e-11 | 3 |
acinar cell | 2.10e-09 | 5 |
gingival epithelial cell | 2.28e-09 | 3 |
fibrocyte | 2.64e-09 | 3 |
tendon cell | 2.64e-09 | 3 |
adult endothelial progenitor cell | 3.24e-09 | 3 |
protein secreting cell | 7.62e-08 | 6 |
hepatic stem cell | 2.18e-07 | 2 |
hepatic mesenchymal stem cell | 2.18e-07 | 2 |
sebum secreting cell | 5.03e-07 | 2 |
epithelial cell of sweat gland | 5.03e-07 | 2 |
epithelial cell of skin gland | 5.03e-07 | 2 |
acinar cell of sebaceous gland | 5.03e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.28e-09 | 3 |
dense regular connective tissue | 2.64e-09 | 3 |
tendon | 2.64e-09 | 3 |
regular connective tissue | 2.64e-09 | 3 |
omentum | 1.37e-08 | 6 |
peritoneum | 1.37e-08 | 6 |
abdominal cavity | 1.37e-08 | 6 |
visceral peritoneum | 1.37e-08 | 6 |
jaw skeleton | 3.38e-08 | 4 |
splanchnocranium | 3.38e-08 | 4 |
perirenal fat | 2.55e-07 | 2 |
skin gland | 5.03e-07 | 2 |
epidermis gland | 5.03e-07 | 2 |
gland of integumental system | 5.03e-07 | 2 |
sebaceous gland | 5.03e-07 | 2 |
skin sebaceous gland | 5.03e-07 | 2 |
sweat gland | 5.03e-07 | 2 |
sweat gland placode | 5.03e-07 | 2 |
sebaceous gland placode | 5.03e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.99e-08 | 14 |