FFCP PHASE1:Hg19::chr1:111682827..111682882,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10390 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24289 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y6K0,B3KN25 | |||
|association_with_transcript=0bp_to_ENST00000357172,NM_006090,uc001eai.1,uc001eaj.1_5end | |||
|cluster_id=chr1:111682827..111682882,+ | |||
|description=CAGE_peak_1_at_CEPT1_5end | |||
|id=chr1:111682827..111682882,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.83e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-25!115;UBERON:0001049!3.83e-19!57;UBERON:0005068!3.83e-19!57;UBERON:0006241!3.83e-19!57;UBERON:0007135!3.83e-19!57;UBERON:0003080!8.24e-17!42;UBERON:0002780!2.58e-16!41;UBERON:0001890!2.58e-16!41;UBERON:0006240!2.58e-16!41;UBERON:0002616!8.10e-15!59;UBERON:0000955!3.49e-14!69;UBERON:0006238!3.49e-14!69;UBERON:0001893!1.44e-12!34;UBERON:0002020!1.83e-12!34;UBERON:0003528!1.83e-12!34;UBERON:0001017!2.21e-12!82;UBERON:0002791!3.74e-12!33;UBERON:0005743!5.97e-12!86;UBERON:0000073!9.60e-12!94;UBERON:0001016!9.60e-12!94;UBERON:0001869!1.62e-11!32;UBERON:0002619!3.41e-10!22;UBERON:0000153!7.26e-10!129;UBERON:0007811!7.26e-10!129;UBERON:0000033!1.54e-09!123;UBERON:0001950!3.64e-09!20;UBERON:0002346!4.29e-09!90;UBERON:0003075!1.00e-08!86;UBERON:0007284!1.00e-08!86;UBERON:0000956!2.32e-08!25;UBERON:0000203!2.32e-08!25;UBERON:0000924!5.46e-08!173;UBERON:0006601!5.46e-08!173;UBERON:0003056!5.79e-08!61;UBERON:0004121!1.23e-07!169;UBERON:0000062!3.15e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.95e-12;41!UBERON:0001890;6.95e-12;41!UBERON:0003528;8.14e-11;34!UBERON:0002020;8.14e-11;34!UBERON:0001893;1.08e-10;34!UBERON:0000073;1.75e-10;53!UBERON:0002616;1.75e-10;53!UBERON:0002791;1.95e-10;32!UBERON:0001869;2.35e-10;32!UBERON:0002619;3.46e-10;22!UBERON:0001950;3.73e-09;20!UBERON:0007023;1.79e-08;114!UBERON:0000956;2.51e-08;25!UBERON:0000203;2.51e-08;25!UBERON:0001017;7.18e-07;75!UBERON:0000955;8.96e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.96e-25,114;UBERON:0001049,1.19e-18,56;UBERON:0005068,1.19e-18,56;UBERON:0006241,1.19e-18,56;UBERON:0007135,1.19e-18,56;UBERON:0000073,3.35e-17,53;UBERON:0002616,3.35e-17,53;UBERON:0002780,2.58e-16,41;UBERON:0001890,2.58e-16,41;UBERON:0003080,2.58e-16,41;UBERON:0006240,2.58e-16,41;UBERON:0000955,9.50e-14,68;UBERON:0006238,9.50e-14,68;UBERON:0001893,1.44e-12,34;UBERON:0003528,1.83e-12,34;UBERON:0002020,1.83e-12,34;UBERON:0001017,5.52e-12,81;UBERON:0001016,9.77e-12,89;UBERON:0002791,1.23e-11,32;UBERON:0001869,1.62e-11,32;UBERON:0002619,3.41e-10,22;UBERON:0002346,1.29e-09,86;UBERON:0003075,3.00e-09,82;UBERON:0007284,3.00e-09,82;UBERON:0001950,3.64e-09,20;UBERON:0010371,5.67e-09,104;UBERON:0000956,2.32e-08,25;UBERON:0000203,2.32e-08,25;UBERON:0004121,2.94e-08,171;UBERON:0000924,2.94e-08,171;UBERON:0006601,2.94e-08,171;UBERON:0003056,7.00e-08,61;UBERON:0011216,1.13e-07,223 | |||
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| |||
|short_description=p1@CEPT1 | |||
}} |
Latest revision as of 02:37, 16 September 2015
Short description: | p1@CEPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CEPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357172, NM_006090, uc001eai.1, uc001eaj.1_5end |
EntrezGene: | CEPT1 |
HGNC: | 24289 |
UniProt: | Q9Y6K0B3KN25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.96e-25 | 114 |
neural tube | 1.19e-18 | 56 |
neural rod | 1.19e-18 | 56 |
future spinal cord | 1.19e-18 | 56 |
neural keel | 1.19e-18 | 56 |
regional part of nervous system | 3.35e-17 | 53 |
regional part of brain | 3.35e-17 | 53 |
regional part of forebrain | 2.58e-16 | 41 |
forebrain | 2.58e-16 | 41 |
anterior neural tube | 2.58e-16 | 41 |
future forebrain | 2.58e-16 | 41 |
brain | 9.50e-14 | 68 |
future brain | 9.50e-14 | 68 |
telencephalon | 1.44e-12 | 34 |
brain grey matter | 1.83e-12 | 34 |
gray matter | 1.83e-12 | 34 |
central nervous system | 5.52e-12 | 81 |
nervous system | 9.77e-12 | 89 |
regional part of telencephalon | 1.23e-11 | 32 |
cerebral hemisphere | 1.62e-11 | 32 |
regional part of cerebral cortex | 3.41e-10 | 22 |
neurectoderm | 1.29e-09 | 86 |
neural plate | 3.00e-09 | 82 |
presumptive neural plate | 3.00e-09 | 82 |
neocortex | 3.64e-09 | 20 |
ecto-epithelium | 5.67e-09 | 104 |
cerebral cortex | 2.32e-08 | 25 |
pallium | 2.32e-08 | 25 |
ectoderm-derived structure | 2.94e-08 | 171 |
ectoderm | 2.94e-08 | 171 |
presumptive ectoderm | 2.94e-08 | 171 |
pre-chordal neural plate | 7.00e-08 | 61 |
organ system subdivision | 1.13e-07 | 223 |