FFCP PHASE1:Hg19::chr19:954903..954920,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:954903..954920,- | |||
|coexpression_cluster_id=C826 | |||
|description=CAGE_peak_at_chr19:954903..954920,- | |||
|id=chr19:954903..954920,- | |||
|ontology_enrichment_celltype=CL:0000945!1.59e-14!24;CL:0000826!1.59e-14!24;CL:0000080!2.78e-12!6;CL:0000542!3.91e-10!53;CL:0000051!3.91e-10!53;CL:0000039!6.51e-10!7;CL:0000586!6.51e-10!7;CL:0000946!1.13e-08!1;CL:0000786!1.13e-08!1;CL:0000980!1.13e-08!1;CL:0000838!3.50e-08!52;CL:0000988!1.68e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.70e-11;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.90e-11,24;CL:0000826,2.90e-11,24;CL:0000838,3.45e-09,52;CL:0000542,5.04e-09,53;CL:0000051,5.04e-09,53;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!5.28e-09!1;DOID:10165!5.28e-09!1;DOID:1798!5.28e-09!1;DOID:12603!6.65e-09!1;DOID:630!1.22e-08!1;DOID:0050177!1.22e-08!1;DOID:0050427!1.22e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!1.49e-07!10;UBERON:0000358!1.49e-07!10;UBERON:0000307!1.49e-07!10;UBERON:0000091!1.49e-07!10;UBERON:0000087!1.49e-07!10;UBERON:0007806!1.49e-07!10;UBERON:0008780!1.49e-07!10;UBERON:0005728!1.49e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.27e-26;10!UBERON:0000178;1.10e-17;15!UBERON:0000179;1.10e-17;15!UBERON:0000463;1.10e-17;15!UBERON:0000478;2.43e-11;24!UBERON:0002390;9.22e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.60e-26,10;UBERON:0000358,3.60e-26,10;UBERON:0000307,3.60e-26,10;UBERON:0000091,3.60e-26,10;UBERON:0000087,3.60e-26,10;UBERON:0007010,3.60e-26,10;UBERON:0007806,3.60e-26,10;UBERON:0008780,3.60e-26,10;UBERON:0005728,3.60e-26,10;UBERON:0000178,9.83e-18,15;UBERON:0000179,9.83e-18,15;UBERON:0000463,9.83e-18,15;UBERON:0000478,2.27e-11,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13957536094264,1.72411237844886,1.73163718890094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0,0.108647371922008,0,0,0,0,0,0,0,0,0.167821586975843,0.569261198172555,0,0,0,0,0,0,0,0,2.96521128680622,2.47127877893006,1.98401704060365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15464825135177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr19:954903..954920,- | |||
}} |
Latest revision as of 18:47, 27 July 2015
Short description: | p@chr19:954903..954920, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:954903..954920, - |
Coexpression cluster: | C826_hairy_B_mycosis_cord_xeroderma_neuroblastoma_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.90e-11 | 24 |
pro-B cell | 2.90e-11 | 24 |
lymphoid lineage restricted progenitor cell | 3.45e-09 | 52 |
lymphocyte | 5.04e-09 | 53 |
common lymphoid progenitor | 5.04e-09 | 53 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.60e-26 | 10 |
blastocyst | 3.60e-26 | 10 |
blastula | 3.60e-26 | 10 |
bilaminar disc | 3.60e-26 | 10 |
inner cell mass | 3.60e-26 | 10 |
cleaving embryo | 3.60e-26 | 10 |
connecting stalk | 3.60e-26 | 10 |
inner cell mass derived epiblast | 3.60e-26 | 10 |
extraembryonic mesoderm | 3.60e-26 | 10 |
blood | 9.83e-18 | 15 |
haemolymphatic fluid | 9.83e-18 | 15 |
organism substance | 9.83e-18 | 15 |
extraembryonic structure | 2.27e-11 | 24 |