FFCP PHASE1:Hg19::chr19:58898180..58898199,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6193 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10426 | |||
|TSSclassifier=strong | |||
|UniProt=P46782 | |||
|association_with_transcript=-436bp_to_ENST00000196551,NM_001009,uc002qsn.2_5end | |||
|cluster_id=chr19:58898180..58898199,+ | |||
|description=CAGE_peak_3_at_RPS5_5end | |||
|id=chr19:58898180..58898199,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.59e-12!254;CL:0000548!4.01e-11!679;CL:0000004!4.01e-11!679;CL:0000255!4.01e-11!679;CL:0000012!1.54e-10!682;CL:0000222!4.02e-10!119;CL:0002321!5.39e-10!248;CL:0000220!6.11e-10!246;CL:0000359!9.24e-09!32;CL:0000183!6.74e-08!59;CL:0000192!9.22e-08!42;CL:0000514!9.22e-08!42;CL:0000680!1.16e-07!57;CL:0000056!1.16e-07!57;CL:0000355!1.16e-07!57;CL:0000187!2.18e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.08e-17;32!CL:0000192;2.33e-12;43!CL:0002592;9.48e-09;3!CL:0002539;1.35e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.47e-19,32;CL:0000192,3.15e-16,43;CL:0000514,3.15e-16,43;CL:0000187,5.41e-13,55;CL:0000222,1.26e-12,121;CL:0000680,4.71e-12,58;CL:0000056,4.71e-12,58;CL:0000355,4.71e-12,58;CL:0000393,3.29e-11,61;CL:0000211,3.29e-11,61;CL:0002592,5.52e-09,3;CL:0002539,1.16e-08,10;CL:0002321,3.09e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;2.33e-12;43 | |||
|ontology_enrichment_disease=DOID:305!6.41e-09!106;DOID:0050687!3.37e-08!143;DOID:14566!3.16e-07!239;DOID:162!9.05e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!1.41e-09!138;UBERON:0003104!2.85e-09!238;UBERON:0009142!2.85e-09!238;UBERON:0001981!3.71e-08!60;UBERON:0007500!3.71e-08!60;UBERON:0004537!3.71e-08!60;UBERON:0006965!3.71e-08!60;UBERON:0002100!7.45e-08!216;UBERON:0001637!7.97e-08!42;UBERON:0003509!7.97e-08!42;UBERON:0004572!7.97e-08!42;UBERON:0003914!1.77e-07!118;UBERON:0002049!2.95e-07!79;UBERON:0007798!2.95e-07!79;UBERON:0000055!8.65e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.62e-14;33!UBERON:0004571;1.62e-14;33!UBERON:0001637;3.17e-12;42!UBERON:0003509;3.17e-12;42!UBERON:0004572;3.17e-12;42!UBERON:0007500;2.64e-09;56!UBERON:0001981;2.64e-09;56!UBERON:0004537;2.64e-09;56!UBERON:0003498;9.48e-09;3!UBERON:0005985;9.48e-09;3!UBERON:0001621;9.48e-09;3!UBERON:0004237;1.35e-08;10!UBERON:0004695;1.35e-08;10!UBERON:0002111;1.35e-08;10!UBERON:0004178;1.35e-08;10!UBERON:0001135;2.81e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.00e-19,42;UBERON:0003509,7.00e-19,42;UBERON:0004572,7.00e-19,42;UBERON:0007500,1.35e-16,59;UBERON:0001981,1.35e-16,59;UBERON:0004537,1.35e-16,59;UBERON:0006965,1.35e-16,59;UBERON:0004573,4.95e-16,33;UBERON:0004571,4.95e-16,33;UBERON:0000055,1.40e-13,68;UBERON:0004872,1.40e-13,83;UBERON:0002049,3.56e-12,78;UBERON:0007798,3.56e-12,78;UBERON:0001134,6.02e-11,62;UBERON:0002036,6.02e-11,62;UBERON:0003082,6.02e-11,62;UBERON:0002385,1.90e-10,64;UBERON:0001015,1.90e-10,64;UBERON:0000383,1.90e-10,64;UBERON:0002329,5.07e-10,71;UBERON:0003059,5.07e-10,71;UBERON:0007282,5.07e-10,71;UBERON:0004290,5.07e-10,71;UBERON:0009618,5.07e-10,71;UBERON:0003077,8.25e-10,72;UBERON:0007285,8.25e-10,72;UBERON:0007503,8.33e-10,78;UBERON:0007524,1.32e-09,73;UBERON:0000490,1.36e-09,148;UBERON:0004535,1.66e-09,109;UBERON:0003914,1.82e-09,117;UBERON:0001009,4.49e-09,112;UBERON:0001621,5.52e-09,3;UBERON:0004237,1.16e-08,10;UBERON:0004695,1.16e-08,10;UBERON:0002111,1.16e-08,10;UBERON:0004178,1.16e-08,10;UBERON:0000486,7.71e-08,83;UBERON:0002100,1.18e-07,199;UBERON:0001135,3.05e-07,15;UBERON:0003104,8.20e-07,160;UBERON:0009142,8.20e-07,160 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,3.48900583986214,0,0.527533956456907,0.247532705920093,0.662794751455832,3.36162573225888,1.20538905604795,2.19093027116212,1.46379839637152,0.246242116153576,0.816002764977012,0,0,0.273748850145768,0,0,0,0.0787107813136792,0,0,0.464448369948228,3.67768489791571,0.90361775633475,1.47901604066715,0.232401601740905,0.568676929949686,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0.56738522469114,0,0,0.521482918420201,0.434377689410233,0,0,0,0,0,0.419317291016752,0.112328631146495,0,0,0.570025487482497,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0.950452044448374,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0.724232594804119,0,0.486634870302636,0.0945348171640679,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,1.13061588384802,0.419499436209906,1.10047216776027,0,0.258416759169329,0,0,2.01414658554573,2.28081631715554,0.488124115096339,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0.949265659568129,0.916008719652036,0,0,0.436094052142534,0,0.25326102332916,0.397227542439656,0.286836620748814,0,1.12135520028461,0,1.48000529050296,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0.234321431833797,1.24864030732128,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0.340296549480063,0,0.427114777637135,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0.194874010322397,0.252433774244115,0.0920498986422993,0.484938170456436,0.355009592516614,0.302256294682921,0.339121184620975,0.193260853163297,0.545492241181669,0.860413786167011,0.121973706129595,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0.464367928031979,2.88751792667834,0.946454400318751,1.18009283054671,0.241011029883482,0.441175890929576,0.871517776369625,0.474541238222193,2.02246962240247,0.98110732562673,1.15424147083917,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,0,0.441463099414651,0.245976877086227,0.514703430895577,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0.761016608938393,1.58040879591855,1.71697232418975,0,0.234004265139238,0,0.93733833986777,0,0.283550194484773,0.358234090811393,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.22001485746285,0.646358578788889,0,0,0.531876233169741,0,0.257207374262142,2.83698264046557,0.532844358032199,0.428933980974443,0.542621605391443,0,0.325736184293735,0.710783897485092,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0.479249710983165,1.14861935834114,0,0.868687840005475,0.205476322550383,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,1.00034104211935,1.08506009479894,0.415941723061614,0.892144943985809,0.630809660135739,0.117141414992713,0.601892199455438,0,3.10419213877515,0,0.921845842708516,0.260650843404249,0.587403472388222,0.343143423810856,0,0.215714200818617,0,2.42502057157008,0,0.907170879989041,0.496215615637554,0.460385919864187,1.40330047216537,0.768834895534206,0,0.804269605718038,1.48418066444991,0.771048469013278,0.710246901252508,0.0821271560138091,0,0.348631135379878,0.241718899183244,0.802025881213139,0.276242966807689,0.459257792658427,0.910455840033585,0.524497659837696,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.510281115829547,0.431831832204279,0,0.812839312631559,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0.976135183992909,0.206082023295445,0,0.330037999682352,0,0,0,1.16004861950546,0.462145851343933,0.614014698904518,0.275673144969061,0.107420244868274,0.435050081742686,0.0852266274161009,0,1.15699440752685,0.192190067365106,0.510450849978337,0.708104465988849,1.39453664789186,0.31481234683064,1.3940745403212,0.616067160352178,0,0.869932992075073,1.11194531462352,2.57624796135584,0,0.316379424718726,0.38126038784765,1.02359116524534,0.42793898803392,0.636406495851874,1.56989728039846,0,1.09814811894422,0.235624804691373,2.42618977887979,3.17020642346017,1.68503382495592,0.975267478179181,0,0,0.136499911407986,0.424216295861138,0,0.551365343546124,1.99031692572366,2.19225442626881,0,0,1.01455188481352,1.54911749049875,0.563391205064483,0.143411352204052,0.0982490410131212,1.78335525740625,0,0.211107635297664,0.658589785919804,0.379473173765715,1.04980416073495,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,1.92495971052672,2.9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| |||
|short_description=p3@RPS5 | |||
}} |
Latest revision as of 07:35, 20 September 2015
Short description: | p3@RPS5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPS5_5end |
Coexpression cluster: | NA |
Association with transcript: | -436bp_to_ENST00000196551, NM_001009, uc002qsn.2_5end |
EntrezGene: | RPS5 |
HGNC: | 10426 |
UniProt: | P46782 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.47e-19 | 32 |
smooth muscle cell | 3.15e-16 | 43 |
smooth muscle myoblast | 3.15e-16 | 43 |
muscle cell | 5.41e-13 | 55 |
mesodermal cell | 1.26e-12 | 121 |
muscle precursor cell | 4.71e-12 | 58 |
myoblast | 4.71e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.71e-12 | 58 |
electrically responsive cell | 3.29e-11 | 61 |
electrically active cell | 3.29e-11 | 61 |
smooth muscle cell of the coronary artery | 5.52e-09 | 3 |
aortic smooth muscle cell | 1.16e-08 | 10 |
embryonic cell | 3.09e-07 | 250 |