FFCP PHASE1:Hg19::chr19:55128414..55128437,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6605 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NHL6 | |||
|association_with_transcript=-174bp_to_ENST00000396331_5end | |||
|cluster_id=chr19:55128414..55128437,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_4_at_LILRB1_5end | |||
|id=chr19:55128414..55128437,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.05e-51!42;CL:0002194!4.66e-48!63;CL:0000576!4.66e-48!63;CL:0000040!4.66e-48!63;CL:0000559!4.66e-48!63;CL:0000860!3.08e-47!45;CL:0002009!3.40e-46!65;CL:0000766!4.28e-42!76;CL:0000839!5.32e-42!70;CL:0000557!3.12e-41!71;CL:0002087!1.28e-28!119;CL:0000738!4.64e-26!140;CL:0000763!2.21e-24!112;CL:0000049!2.21e-24!112;CL:0002031!9.40e-23!124;CL:0000037!1.68e-18!172;CL:0000566!1.68e-18!172;CL:0000988!1.05e-16!182;CL:0002032!8.08e-16!165;CL:0000837!8.08e-16!165;CL:0002393!2.78e-12!9;CL:0002397!2.78e-12!9;CL:0000875!4.52e-08!3;CL:0002396!4.52e-08!3;CL:0000842!4.48e-07!3;CL:0002619!7.93e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.19e-31;48!CL:0000860;2.41e-30;33!CL:0002057;2.41e-30;33!CL:0000875;7.16e-22;3!CL:0002396;7.16e-22;3!CL:0000473;1.85e-20;39!CL:0000234;1.85e-20;39!CL:0000766;1.78e-19;69!CL:0002393;1.98e-18;6!CL:0002397;1.98e-18;6!CL:0002087;1.59e-08;104!CL:0000763;1.60e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.57e-60,42;CL:0002057,3.57e-60,42;CL:0000473,3.58e-52,48;CL:0000234,3.58e-52,48;CL:0002194,2.54e-45,59;CL:0000576,2.54e-45,59;CL:0000040,2.54e-45,59;CL:0000559,2.54e-45,59;CL:0002009,9.92e-44,61;CL:0000766,2.58e-40,72;CL:0000839,3.63e-40,66;CL:0000557,1.62e-39,67;CL:0002393,1.02e-36,9;CL:0002397,1.02e-36,9;CL:0000763,1.31e-25,108;CL:0000049,1.31e-25,108;CL:0002087,9.16e-24,115;CL:0000875,7.42e-22,3;CL:0002396,7.42e-22,3;CL:0000738,1.57e-21,136;CL:0002031,2.03e-20,120;CL:0000037,1.28e-16,168;CL:0002032,7.81e-16,161;CL:0000837,7.81e-16,161;CL:0000988,1.49e-15,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.85e-43;42!CL:0000049;6.20e-10;108!UBERON:0010115;8.40e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.36e-44!102;UBERON:0003061!6.36e-44!102;UBERON:0002193!2.66e-42!112;UBERON:0002405!1.20e-35!115;UBERON:0002371!3.49e-35!80;UBERON:0001474!7.41e-32!86;UBERON:0004765!2.77e-25!101;UBERON:0001434!2.77e-25!101;UBERON:0007023!1.92e-15!115;UBERON:0003081!1.95e-14!216;UBERON:0002204!1.85e-11!167;UBERON:0000062!1.79e-07!511;UBERON:0002106!2.50e-07!3;UBERON:0004854!2.50e-07!3;UBERON:0009034!2.50e-07!3;UBERON:0002095!2.50e-07!3;UBERON:0004782!2.50e-07!3;UBERON:0003281!2.50e-07!3;UBERON:0009664!2.50e-07!3;UBERON:0002296!2.50e-07!3;UBERON:0005602!2.50e-07!3;UBERON:0001179!2.50e-07!3;UBERON:0006293!2.50e-07!3;UBERON:0004177!4.43e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.21e-10;3!UBERON:0000029;2.44e-08;1!UBERON:0002363;8.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.31e-38,98;UBERON:0003061,7.31e-38,98;UBERON:0002193,4.28e-37,108;UBERON:0002405,5.67e-37,93;UBERON:0002371,2.00e-34,76;UBERON:0001474,1.21e-31,82;UBERON:0004765,1.67e-28,90;UBERON:0001434,2.82e-25,100;UBERON:0003081,5.34e-16,203;UBERON:0002204,1.50e-13,167;UBERON:0002106,2.11e-10,3;UBERON:0004854,2.11e-10,3;UBERON:0009034,2.11e-10,3;UBERON:0002095,2.11e-10,3;UBERON:0004782,2.11e-10,3;UBERON:0003281,2.11e-10,3;UBERON:0009664,2.11e-10,3;UBERON:0002296,2.11e-10,3;UBERON:0005602,2.11e-10,3;UBERON:0001179,2.11e-10,3;UBERON:0006293,2.11e-10,3;UBERON:0000926,1.28e-09,315;UBERON:0004120,1.28e-09,315;UBERON:0006603,1.28e-09,315;UBERON:0000029,2.52e-08,1;UBERON:0002363,9.29e-08,1;UBERON:0007645,9.29e-08,1;UBERON:0007647,9.29e-08,1;UBERON:0010115,9.29e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,1.85779347979291,0,0,0,0,0,0,1.10799081706375,0,0,0.671746422719773,0.32389366601898,0.515151135268373,0.290796477559129,1.13362783106643,3.88134497900506,0.232429036905685,0.411167888021826,0.309706370895104,0,2.56160706529101,4.25668013799453,0.689491361473237,0.645484683583826,1.35426486594342,0.376484679085209,0.545812300115692,2.69668181334102,0.918251677112708,1.60464513538047,4.47535988059329,0.659702600373432,3.59034583718937,8.52449501065388,0,0,0,0.251248665256743,2.60741459210101,6.73285418585862,0,0,1.58231193720442,6.5489138756702,13.8192794977278,8.17668717482666,0.112328631146495,0.300353785683013,0.32145117339416,11.1154970059087,18.6981676567145,30.1395853711646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,1.32957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0,0.13223260174269,0,0,0.213574825135389,0,0,9.42715441442707,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0.437119121007915,0,0,0,0.588925401344836,0,0,0,30.5447733434524,9.86205685995731,0.199882311849858,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.413731983447581,0,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0.202056159043763,0.717222053926764,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p4@LILRB1 | |||
}} |
Latest revision as of 22:55, 19 September 2015
Short description: | p4@LILRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LILRB1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -174bp_to_ENST00000396331_5end |
EntrezGene: | LILRB1 |
HGNC: | 6605 |
UniProt: | Q8NHL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.57e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-60 | 42 |
defensive cell | 3.58e-52 | 48 |
phagocyte | 3.58e-52 | 48 |
monopoietic cell | 2.54e-45 | 59 |
monocyte | 2.54e-45 | 59 |
monoblast | 2.54e-45 | 59 |
promonocyte | 2.54e-45 | 59 |
macrophage dendritic cell progenitor | 9.92e-44 | 61 |
myeloid leukocyte | 2.58e-40 | 72 |
myeloid lineage restricted progenitor cell | 3.63e-40 | 66 |
granulocyte monocyte progenitor cell | 1.62e-39 | 67 |
intermediate monocyte | 1.02e-36 | 9 |
CD14-positive, CD16-positive monocyte | 1.02e-36 | 9 |
myeloid cell | 1.31e-25 | 108 |
common myeloid progenitor | 1.31e-25 | 108 |
nongranular leukocyte | 9.16e-24 | 115 |
non-classical monocyte | 7.42e-22 | 3 |
CD14-low, CD16-positive monocyte | 7.42e-22 | 3 |
leukocyte | 1.57e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 2.03e-20 | 120 |
hematopoietic stem cell | 1.28e-16 | 168 |
hematopoietic oligopotent progenitor cell | 7.81e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.81e-16 | 161 |
hematopoietic cell | 1.49e-15 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.31e-38 | 98 |
blood island | 7.31e-38 | 98 |
hemolymphoid system | 4.28e-37 | 108 |
immune system | 5.67e-37 | 93 |
bone marrow | 2.00e-34 | 76 |
bone element | 1.21e-31 | 82 |
skeletal element | 1.67e-28 | 90 |
skeletal system | 2.82e-25 | 100 |
lateral plate mesoderm | 5.34e-16 | 203 |
musculoskeletal system | 1.50e-13 | 167 |
spleen | 2.11e-10 | 3 |
gastrointestinal system mesentery | 2.11e-10 | 3 |
stomach region | 2.11e-10 | 3 |
mesentery | 2.11e-10 | 3 |
gastrointestinal system serosa | 2.11e-10 | 3 |
mesentery of stomach | 2.11e-10 | 3 |
gut mesentery | 2.11e-10 | 3 |
dorsal mesentery | 2.11e-10 | 3 |
dorsal mesogastrium | 2.11e-10 | 3 |
peritoneal cavity | 2.11e-10 | 3 |
spleen primordium | 2.11e-10 | 3 |
mesoderm | 1.28e-09 | 315 |
mesoderm-derived structure | 1.28e-09 | 315 |
presumptive mesoderm | 1.28e-09 | 315 |
lymph node | 2.52e-08 | 1 |
dura mater | 9.29e-08 | 1 |
future meninx | 9.29e-08 | 1 |
ectomeninx | 9.29e-08 | 1 |
future dura mater | 9.29e-08 | 1 |