FFCP PHASE1:Hg19::chr19:45324498..45324506,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-419bp_to_CU690689_5end | |||
|cluster_id=chr19:45324498..45324506,- | |||
|description=CAGE_peak_1_at_CU690689_5end | |||
|id=chr19:45324498..45324506,- | |||
|ontology_enrichment_celltype=CL:0000066!5.00e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:0002336;8.61e-11;1!CL:0002261;8.61e-11;1!CL:0002170;8.61e-11;1!CL:0000313;8.61e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002336,8.22e-11,1;CL:0002261,8.22e-11,1;CL:0002170,8.22e-11,1;CL:0000313,1.33e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.43e-17;5!UBERON:0010227;3.24e-11;1!UBERON:0004874;8.61e-11;1 | |||
|ontology_enrichment_disease=DOID:305!1.99e-08!106;DOID:0050687!7.76e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;8.61e-11;1!DOID:178;8.61e-11;1!DOID:326;8.61e-11;1!DOID:3978;8.61e-11;1!DOID:3394;8.61e-11;1!DOID:2152;8.61e-11;1!DOID:5844;8.61e-11;1!DOID:3149;8.61e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,4.15e-11,1;DOID:326,4.15e-11,1;DOID:3978,4.15e-11,1;DOID:3394,4.15e-11,1;DOID:5844,4.15e-11,1;DOID:3151,6.14e-11,1;DOID:3149,6.14e-11,1;DOID:2152,1.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.24e-10!169;UBERON:0000925!1.24e-10!169;UBERON:0006595!1.24e-10!169;UBERON:0001007!3.36e-09!155;UBERON:0001555!3.36e-09!155;UBERON:0007026!3.36e-09!155;UBERON:0005911!1.55e-08!82;UBERON:0004921!5.37e-08!129;UBERON:0004185!5.37e-08!129;UBERON:0005177!3.82e-07!107;UBERON:0000481!4.48e-07!347;UBERON:0002530!5.94e-07!59;UBERON:0005153!8.73e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.43e-17;5!UBERON:0002079;3.24e-11;1!UBERON:0000989;8.61e-11;1!UBERON:0004911;8.61e-11;1!UBERON:0008811;8.61e-11;1!UBERON:0002368;4.75e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.91e-17,5;UBERON:0004117,2.91e-17,5;UBERON:0007689,2.91e-17,5;UBERON:0007123,2.91e-17,5;UBERON:0003091,2.91e-17,5;UBERON:0002079,2.79e-11,1;UBERON:0000989,7.46e-11,1;UBERON:0008811,7.46e-11,1;UBERON:0006258,7.46e-11,1;UBERON:0005876,7.46e-11,1;UBERON:0004874,7.46e-11,1;UBERON:0004911,1.33e-10,1;UBERON:0008814,1.89e-08,18;UBERON:0004876,3.00e-08,11;UBERON:0009722,3.76e-08,11;UBERON:0007690,3.76e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.579386075843295,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.732186172644509,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.614942192715568,0.343135620597051,0.439001141634502,0,0.201057944823262,1.48141512253647,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,1.81289174387433,0.200506470303285,0.460404944679482,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,1.54227252690289,0,1.00337954770971,0,0,0,0,0.261435451024901,0,0,0.650756789328606,0.206082023295445,0.0915694648183434,0,0,0.650060246036521,0,0.386682873168488,0,0,0,0,0,0,0.534192213880424,0.826424576804891,0.192190067365106,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0,0,0.235624804691373,0,0,0,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0.398495976502139,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0.724999575434793,0.682760689712998,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,2.64905114129346,0.461701551022782,0,0,0.269272933229316,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,1.99052386215701,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.391969589657511,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0.391102765469606,0.160317640503067,0,0.19980960958213,0,0,0.343189995723929,0,0.124252535565433,0.471388069233591,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,1.99679000498991,0.429226048136571,0,0.470284307407084,0,0,0.630265458457789,0.247247575143499,0.943649613958588,0.393709926058995,0,0,0,0.160753148465019,0.962776056180637,0,0,0,0.121499113316049,1.67717343799633,0.788057072991982,2.46536564234491,0.105600336519406,0,0.191915197319445,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0.340776043570843,0.226624183040251,0.58620893471233,2.65013777824443,0,0,0.171086837884329,0,0.106787412567695,0.157204305099666,0.828478110694391,0.496166021811951,0,0,1.27668251554036,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.521988583930423,0.453411851024545,0,0,0.358177682162975,0,0.657852148736121,0,0.38582807654183,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0.294443155503077,0,0.366857197043358,0.924205329202706,0,0,0.198916222116275,0.300841313397029,0,0,0.261906694481422,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,1.48863353516788,0,0.511049710558381,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0.590969204419841,0,0.156986185701028,0,0.280272163313789,0,0.215927591218621,0.9555033757741,0.500335809236594,0,0.23248285073625,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0.22910686854405,0,0,1.11855431797792,0,0,0,0,4.6392577253528,0,0,0.795803100645473,0,0,0,0.150962843566674,0,0.655678681511872,1.88126918544609,0,0.235676547101626,0,0,0,0,0,0.322289439867886,0,0.178553938605658,0,0.401206833445841,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0.714193294391221,0.0645889098360061,0.248298857183432,1.00918676322552,1.2729431655633,1.21270313374932,0.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| |||
|short_description=p1@CU690689 | |||
}} |
Latest revision as of 14:45, 27 July 2015
Short description: | p1@CU690689 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU690689_5end |
Coexpression cluster: | NA |
Association with transcript: | -419bp_to_CU690689_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 8.22e-11 | 1 |
endothelial cell of viscerocranial mucosa | 8.22e-11 | 1 |
keratinized cell of the oral mucosa | 8.22e-11 | 1 |
serous secreting cell | 1.33e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.91e-17 | 5 |
pharyngeal pouch | 2.91e-17 | 5 |
thyroid diverticulum | 2.91e-17 | 5 |
pharyngeal pouch 2 | 2.91e-17 | 5 |
thyroid primordium | 2.91e-17 | 5 |
left cardiac atrium | 2.79e-11 | 1 |
penis | 7.46e-11 | 1 |
intromittent organ | 7.46e-11 | 1 |
lateral plate mesenchyme | 7.46e-11 | 1 |
undifferentiated genital tubercle | 7.46e-11 | 1 |
somatopleure | 7.46e-11 | 1 |
epithelium of female gonad | 1.33e-10 | 1 |
pharyngeal arch system | 1.89e-08 | 18 |
urogenital ridge | 3.00e-08 | 11 |
entire pharyngeal arch endoderm | 3.76e-08 | 11 |
early pharyngeal endoderm | 3.76e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 4.15e-11 | 1 |
ischemia | 4.15e-11 | 1 |
extrinsic cardiomyopathy | 4.15e-11 | 1 |
myocardial ischemia | 4.15e-11 | 1 |
myocardial infarction | 4.15e-11 | 1 |
skin squamous cell carcinoma | 6.14e-11 | 1 |
keratoacanthoma | 6.14e-11 | 1 |
ovary epithelial cancer | 1.33e-10 | 1 |