FFCP PHASE1:Hg19::chr19:44258733..44258757,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:44258733..44258757,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr19:44258733..44258757,- | |||
|id=chr19:44258733..44258757,- | |||
|ontology_enrichment_celltype=CL:0002057!1.12e-17!42;CL:0000860!4.35e-16!45;CL:0000839!9.04e-14!70;CL:0000557!3.40e-12!71;CL:0000766!4.42e-12!76;CL:0002031!1.64e-11!124;CL:0000738!1.03e-10!140;CL:0000988!6.89e-10!182;CL:0000037!1.17e-09!172;CL:0000566!1.17e-09!172;CL:0002194!1.41e-09!63;CL:0000576!1.41e-09!63;CL:0000040!1.41e-09!63;CL:0000559!1.41e-09!63;CL:0002009!4.03e-09!65;CL:0000763!4.58e-09!112;CL:0000049!4.58e-09!112;CL:0002032!4.81e-09!165;CL:0000837!4.81e-09!165;CL:0002087!8.77e-09!119;CL:0002393!2.40e-08!9;CL:0002397!2.40e-08!9;CL:0002274!3.29e-07!5;CL:0000457!3.29e-07!5;CL:0002191!3.29e-07!5;CL:0000097!3.29e-07!5;CL:0000831!3.29e-07!5;CL:0002028!3.29e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.94e-12;6!CL:0002397;4.94e-12;6!CL:0002592;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.48e-10,42;CL:0002057,7.48e-10,42;CL:0000839,1.23e-08,66;CL:0000473,1.27e-08,48;CL:0000234,1.27e-08,48;CL:0000557,1.66e-08,67;CL:0002393,2.85e-08,9;CL:0002397,2.85e-08,9;CL:0000766,6.61e-08,72;CL:0002194,6.80e-07,59;CL:0000576,6.80e-07,59;CL:0000040,6.80e-07,59;CL:0000559,6.80e-07,59;CL:0002592,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10!CL:0002057;8.13e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.80e-14!112;UBERON:0002390!2.76e-13!102;UBERON:0003061!2.76e-13!102;UBERON:0002371!4.37e-11!80;UBERON:0002405!9.32e-11!115;UBERON:0001474!9.83e-11!86;UBERON:0004765!3.94e-08!101;UBERON:0001434!3.94e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.99e-09;8!UBERON:0003135;4.30e-07;11!UBERON:0003498;8.86e-07;3!UBERON:0005985;8.86e-07;3!UBERON:0001621;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.99e-09,8;UBERON:0002371,1.75e-07,76;UBERON:0003135,4.30e-07,11;UBERON:0001474,6.37e-07,82;UBERON:0001621,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0,0,0,0,0.309632246632152,0,0,0,0,0,0,2.76997704265939,1.00272223735071,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0.47296445977717,0.689491361473237,0,0,0,0,0.224723484445085,0.612167784741805,0.320929027076094,1.27867425159808,0,0,0,0.870627715885752,1.70215567407342,0.622822248995575,0,0,0.217188844705117,1.21079900526674,0.736555271975129,0,0,0.212604299965044,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,6.81091192588106,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,1.03664057770386,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0.303127571446259,0,0.30239029332968,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0.0915694648183434,0,0.574265537996172,0,0,0,0,0.307007349452259,0,0,0,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86610769153401,11.2544934665595,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:44258733..44258757,- | |||
}} |
Latest revision as of 14:33, 27 July 2015
Short description: | p@chr19:44258733..44258757, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:44258733..44258757, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.48e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.48e-10 | 42 |
myeloid lineage restricted progenitor cell | 1.23e-08 | 66 |
defensive cell | 1.27e-08 | 48 |
phagocyte | 1.27e-08 | 48 |
granulocyte monocyte progenitor cell | 1.66e-08 | 67 |
intermediate monocyte | 2.85e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.85e-08 | 9 |
myeloid leukocyte | 6.61e-08 | 72 |
monopoietic cell | 6.80e-07 | 59 |
monocyte | 6.80e-07 | 59 |
monoblast | 6.80e-07 | 59 |
promonocyte | 6.80e-07 | 59 |
smooth muscle cell of the coronary artery | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.99e-09 | 8 |
bone marrow | 1.75e-07 | 76 |
male reproductive organ | 4.30e-07 | 11 |
bone element | 6.37e-07 | 82 |
coronary artery | 8.15e-07 | 3 |