FFCP PHASE1:Hg19::chr19:40786733..40786744,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:40786733..40786744,- | |||
|description=CAGE_peak_at_chr19:40786733..40786744,- | |||
|id=chr19:40786733..40786744,- | |||
|ontology_enrichment_celltype=CL:0002322!2.58e-09!5;CL:0002586!4.41e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.53e-21;1!CL:0000159;1.82e-11;2!CL:0000136;4.80e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.53e-21,1;CL:0000159,1.82e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.02e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.53e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.53e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.52e-36!115;UBERON:0005743!3.42e-23!86;UBERON:0001049!3.12e-22!57;UBERON:0005068!3.12e-22!57;UBERON:0006241!3.12e-22!57;UBERON:0007135!3.12e-22!57;UBERON:0000073!2.26e-21!94;UBERON:0001016!2.26e-21!94;UBERON:0003075!8.03e-21!86;UBERON:0007284!8.03e-21!86;UBERON:0002616!1.65e-19!59;UBERON:0000955!1.77e-19!69;UBERON:0006238!1.77e-19!69;UBERON:0002346!1.95e-19!90;UBERON:0001893!4.79e-19!34;UBERON:0001017!1.01e-18!82;UBERON:0002780!1.50e-18!41;UBERON:0001890!1.50e-18!41;UBERON:0006240!1.50e-18!41;UBERON:0003080!5.79e-18!42;UBERON:0002791!6.29e-18!33;UBERON:0003056!2.31e-17!61;UBERON:0002020!2.48e-17!34;UBERON:0003528!2.48e-17!34;UBERON:0001869!9.84e-17!32;UBERON:0002619!2.63e-16!22;UBERON:0001950!9.42e-16!20;UBERON:0000956!5.96e-14!25;UBERON:0000203!5.96e-14!25;UBERON:0000033!2.66e-12!123;UBERON:0000153!3.93e-12!129;UBERON:0007811!3.93e-12!129;UBERON:0004121!1.96e-09!169;UBERON:0000924!5.54e-09!173;UBERON:0006601!5.54e-09!173;UBERON:0000200!4.75e-08!6;UBERON:0002771!2.80e-07!3;UBERON:0000966!4.32e-07!5;UBERON:0005388!4.32e-07!5;UBERON:0001802!4.32e-07!5;UBERON:0001781!4.41e-07!3;UBERON:0001782!4.41e-07!3;UBERON:0005424!4.41e-07!3;UBERON:0001871!9.38e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.53e-21;1!UBERON:0001301;4.22e-21;1!UBERON:0004909;1.82e-11;2!UBERON:0001905;3.02e-11;2!UBERON:0002757;3.02e-11;2!UBERON:0010134;3.02e-11;2!UBERON:0005408;3.02e-11;2!UBERON:0001899;3.02e-11;2!UBERON:0001896;6.34e-08;3!UBERON:0006947;6.34e-08;3!UBERON:0005290;6.34e-08;3!UBERON:0004054;6.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.53e-21,1;UBERON:0001301,5.16e-21,1;UBERON:0004909,1.82e-11,2;UBERON:0001905,4.52e-11,2;UBERON:0002757,4.52e-11,2;UBERON:0010134,4.52e-11,2;UBERON:0005408,4.52e-11,2;UBERON:0001899,4.52e-11,2;UBERON:0006947,6.78e-08,3;UBERON:0004054,6.78e-08,3;UBERON:0001896,7.26e-08,3;UBERON:0005290,7.26e-08,3;UBERON:0010096,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,1.99226682220855,0,0,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.399358000997982,0.858452096273142,0.223171457441873,0,0,0,0,0,0.0674035438541849,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.242998226632099,0,0.472834243795189,0.262272940674991,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,1.31897010310274,0,0.129282956361551,0,0,0,0,0,0,0,0,0.243585196761792,0,1.08803560673895,0.5013797880454,1.22538230705385,0.983617892129413,0,0,0.488105059607853,0.500763722825999,1.14681839138014,0.221858103073705,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.321146125482298,1.41696576325585,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0.317079050969534,0,0,0,0,0,1.07140367175657,0,0,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79638579494481,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.297046400327086,0,0,0.187967835959707,0,0,0,0,0,0,0,0.143339583151451,0,0.475940431336403,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0.275684698604535,0,0.303114792872958,0.535928260312357,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,1.41482032270754,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr19:40786733..40786744,- | |||
}} |
Latest revision as of 07:49, 26 July 2015
Short description: | p@chr19:40786733..40786744, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:40786733..40786744, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.53e-21 | 1 |
seromucus secreting cell | 1.82e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.53e-21 | 1 |
epididymis | 5.16e-21 | 1 |
epithelium of gonad | 1.82e-11 | 2 |
pineal body | 4.52e-11 | 2 |
regional part of epithalamus | 4.52e-11 | 2 |
secretory circumventricular organ | 4.52e-11 | 2 |
circumventricular organ | 4.52e-11 | 2 |
epithalamus | 4.52e-11 | 2 |
male genital duct | 6.78e-08 | 3 |
internal male genitalia | 6.78e-08 | 3 |
medulla oblongata | 7.26e-08 | 3 |
myelencephalon | 7.26e-08 | 3 |
future myelencephalon | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.53e-21 | 1 |