FFCP PHASE1:Hg19::chr8:71316403..71316427,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:71316403..71316427,-
|short_description=p6@NCOA2
|description=CAGE_peak_6_at_NCOA2_5end
|association_with_transcript=-363bp_to_ENST00000452400_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10499 | |EntrezGene=10499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7669 | |HGNC=7669 | ||
|TSSclassifier=strong | |||
|UniProt=Q15596 | |UniProt=Q15596 | ||
|association_with_transcript=-363bp_to_ENST00000452400_5end | |||
|cluster_id=chr8:71316403..71316427,- | |||
|description=CAGE_peak_6_at_NCOA2_5end | |||
|id=chr8:71316403..71316427,- | |||
|ontology_enrichment_celltype=CL:0000738!2.46e-33!140;CL:0002087!4.25e-32!119;CL:0000037!1.63e-31!172;CL:0000566!1.63e-31!172;CL:0002032!5.75e-30!165;CL:0000837!5.75e-30!165;CL:0002031!3.24e-29!124;CL:0000988!3.06e-28!182;CL:0002057!9.51e-26!42;CL:0000860!1.43e-23!45;CL:0000766!5.22e-23!76;CL:0002194!2.71e-20!63;CL:0000576!2.71e-20!63;CL:0000040!2.71e-20!63;CL:0000559!2.71e-20!63;CL:0000839!1.08e-19!70;CL:0002009!2.60e-19!65;CL:0000557!3.57e-19!71;CL:0000763!8.94e-19!112;CL:0000049!8.94e-19!112;CL:0000542!1.70e-10!53;CL:0000051!1.70e-10!53;CL:0000838!1.93e-10!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.33e-32;33!CL:0002057;3.33e-32;33!CL:0000473;2.18e-24;39!CL:0000234;2.18e-24;39!CL:0000576;1.93e-23;48!CL:0000766;6.85e-18;69!CL:0002087;3.29e-13;104!CL:0000738;1.24e-09;136!CL:0000763;2.49e-09;100!CL:0000094;1.36e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.29e-43,42;CL:0002057,1.29e-43,42;CL:0000473,1.69e-40,48;CL:0000234,1.69e-40,48;CL:0000738,1.51e-39,136;CL:0002087,2.01e-39,115;CL:0000766,4.73e-34,72;CL:0002031,1.17e-33,120;CL:0000037,6.79e-31,168;CL:0002194,2.13e-30,59;CL:0000576,2.13e-30,59;CL:0000040,2.13e-30,59;CL:0000559,2.13e-30,59;CL:0002032,4.57e-30,161;CL:0000837,4.57e-30,161;CL:0002009,7.10e-29,61;CL:0000988,1.12e-28,177;CL:0000557,3.14e-27,67;CL:0000839,1.20e-26,66;CL:0000763,1.13e-20,108;CL:0000049,1.13e-20,108;CL:0002393,1.84e-09,9;CL:0002397,1.84e-09,9;CL:0000838,3.57e-09,52;CL:0000542,7.47e-09,53;CL:0000051,7.47e-09,53;CL:0000094,1.35e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.88e-31;42!CL:0000049;5.77e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.60e-21!102;UBERON:0003061!1.60e-21!102;UBERON:0002193!5.83e-18!112;UBERON:0007023!1.48e-17!115;UBERON:0002405!1.43e-15!115;UBERON:0002371!3.20e-15!80;UBERON:0001474!4.16e-14!86;UBERON:0004765!2.30e-09!101;UBERON:0001434!2.30e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.02e-07;15!UBERON:0000179;9.02e-07;15!UBERON:0000463;9.02e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.57e-30,98;UBERON:0003061,6.57e-30,98;UBERON:0002193,1.80e-27,108;UBERON:0002371,3.48e-23,76;UBERON:0002405,8.34e-22,93;UBERON:0001474,2.61e-20,82;UBERON:0004765,4.09e-17,90;UBERON:0001434,1.21e-14,100;UBERON:0003081,2.36e-07,203;UBERON:0000178,9.97e-07,15;UBERON:0000179,9.97e-07,15;UBERON:0000463,9.97e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.251085279189606,1.22261449196722,0.738905305049512,0.865818594450472,1.57345710739562,4.22212337906934,2.16742572642506,0,0,0,0.0774672005803016,0.710846162437108,0.587200878669695,1.66198622559563,5.21415563422368,4.55722828503289,0.671746422719773,0.32389366601898,1.28787783817093,2.61716829803216,3.40088349319928,2.18325655069035,1.62700325833979,1.23350366406548,3.40677007984614,4.31538588483226,4.35473201099471,3.78371567821736,6.89491361473237,5.80936215225443,2.70852973188684,2.44715041405386,1.36453075028923,2.47195832889593,4.89734227793444,3.85114832491312,4.47535988059329,3.62836430205388,6.78176435913548,2.98357325372886,3.48251086354301,3.97169657283798,4.35975574296902,7.5374599577023,2.08593167368081,4.34377689410233,3.63239701580021,3.68277635987565,4.1140110367315,1.69004229049553,2.97646019951061,1.04829322754188,2.80821577866238,1.35159203557356,4.33959084082116,1.99508920618874,3.58050018958362,1.82664153764634,0,1.09227722252426,2.66852776159066,1.28019066769952,1.60158394814405,2.29900975981793,0,2.86216126360609,2.27685187643779,3.52342313622563,5.3518251937532,6.60856642895129,2.80254281490768,0.790152254325231,1.57367816091066,1.57204305099666,0.822405995998037,1.67186495390678,0.651844533267181,2.36723902867367,1.94826728407911,1.78256731016278,0.589211814949674,0.886135578334485,1.08321545506006,1.79327847615945,1.1705341280389,1.31550323682941,1.65810010671509,1.73881851441031,0.593146252648242,0.267540828089713,0,1.58633079776593,1.53288197440768,1.37450978193052,0.759059076058509,0.95569624297229,1.95325036156926,0,1.35517607169996,1.02389288923535,2.49861453104692,0.710331756132051,0.821127996921047,1.81446068902259,2.40696176205157,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0.649094787309367,0.174129737299267,0.531831842075461,0.476981248610684,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,2.63560834872127,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.375355559615893,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0.487894824518382,0.265059536642971,0.580969714347592,0.829288440122964,1.26160425437814,1.09493207722749,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,20.2808055714929,16.7080626835196,15.3605375737165,0.882926198829301,6.88735255841436,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,1.58040879591855,0,0.492434012174795,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,1.15295962733569,0.88369703398466,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,4.21667878966063,0,0,0,0.144781306667579,0,0,1.56919201590938,2.75843064282698,3.01878604803324,1.79680250791648,0.508189248444927,0,0,0,0,8.23907726341901,8.97484377612075,6.63064821497657,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.27444828735176,3.23571301227925,2.66818894508611,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0.325378394664303,5.66725564062472,0.366277859273374,0.247528499761764,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.11934705049064,0,0,0,0,2.02979043692868,0.764637207142375,1.13929437434833,1.66762242820452,2.46817363851717,0,1.62009431171434,1.58625035258854,0.213648142254946,0.962479855263359,0,0.557409525377156,0.28853842595289,0.213425530045242,0,1.39705560002972,0.766021480529467,1.05836791361941,0.324621940274555,0.561594356226918,0.228234679033192,0,0,0,0.481764225311099,0.403599414382095,1.27753871307098,1.03051603426729,0.921722292925374,0.223676107892416,0.500547425135725,0.586164286206121,0.556812347790485,0,0,0.66614393599564,0,0.561421621224659,0.439524537815682,0.606802608747567,1.22587722705226,0.284136146806413,0.71623345421307,0,0,0,0.562677665642051,0.111308705022906,0.16480387422676,0.211125408127993,0.796991953004279,2.21027132424918,0.755798243562828,0.613612095012929,0.615424027305347,0,0,1.43216939740487,0.511572370226872,0.295930216910801,2.3948309234694,0,1.93866549219044,1.11321717794222,0,0,0.874599999961957,0,0,0.762760950878299,0.236387681767936,0,0,0.173624994933292,0,0.844175070377856,1.52581736317083,0.774054819518572,1.47773809476774,1.09692698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| ||
|short_description=p6@NCOA2 | |||
}} | }} |
Latest revision as of 00:13, 19 September 2015
Short description: | p6@NCOA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NCOA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -363bp_to_ENST00000452400_5end |
EntrezGene: | NCOA2 |
HGNC: | 7669 |
UniProt: | Q15596 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.29e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.29e-43 | 42 |
defensive cell | 1.69e-40 | 48 |
phagocyte | 1.69e-40 | 48 |
leukocyte | 1.51e-39 | 136 |
nongranular leukocyte | 2.01e-39 | 115 |
myeloid leukocyte | 4.73e-34 | 72 |
hematopoietic lineage restricted progenitor cell | 1.17e-33 | 120 |
hematopoietic stem cell | 6.79e-31 | 168 |
monopoietic cell | 2.13e-30 | 59 |
monocyte | 2.13e-30 | 59 |
monoblast | 2.13e-30 | 59 |
promonocyte | 2.13e-30 | 59 |
hematopoietic oligopotent progenitor cell | 4.57e-30 | 161 |
hematopoietic multipotent progenitor cell | 4.57e-30 | 161 |
macrophage dendritic cell progenitor | 7.10e-29 | 61 |
hematopoietic cell | 1.12e-28 | 177 |
granulocyte monocyte progenitor cell | 3.14e-27 | 67 |
myeloid lineage restricted progenitor cell | 1.20e-26 | 66 |
myeloid cell | 1.13e-20 | 108 |
common myeloid progenitor | 1.13e-20 | 108 |
intermediate monocyte | 1.84e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.84e-09 | 9 |
lymphoid lineage restricted progenitor cell | 3.57e-09 | 52 |
lymphocyte | 7.47e-09 | 53 |
common lymphoid progenitor | 7.47e-09 | 53 |
granulocyte | 1.35e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.57e-30 | 98 |
blood island | 6.57e-30 | 98 |
hemolymphoid system | 1.80e-27 | 108 |
bone marrow | 3.48e-23 | 76 |
immune system | 8.34e-22 | 93 |
bone element | 2.61e-20 | 82 |
skeletal element | 4.09e-17 | 90 |
skeletal system | 1.21e-14 | 100 |
lateral plate mesoderm | 2.36e-07 | 203 |
blood | 9.97e-07 | 15 |
haemolymphatic fluid | 9.97e-07 | 15 |
organism substance | 9.97e-07 | 15 |