FFCP PHASE1:Hg19::chr19:2477101..2477142,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4616 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4096 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=241bp_to_AK129595_5end | |||
|cluster_id=chr19:2477101..2477142,+ | |||
|description=CAGE_peak_3_at_GADD45B_5end | |||
|id=chr19:2477101..2477142,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.67e-24!42;CL:0000860!1.04e-21!45;CL:0000557!1.51e-17!71;CL:0002009!1.05e-16!65;CL:0000766!5.19e-16!76;CL:0000839!8.63e-16!70;CL:0002194!1.54e-15!63;CL:0000576!1.54e-15!63;CL:0000040!1.54e-15!63;CL:0000559!1.54e-15!63;CL:0000738!1.22e-14!140;CL:0002031!1.02e-13!124;CL:0002087!3.20e-13!119;CL:0000988!7.24e-09!182;CL:0000037!1.99e-08!172;CL:0000566!1.99e-08!172;CL:0002032!2.75e-08!165;CL:0000837!2.75e-08!165;CL:0000763!3.31e-08!112;CL:0000049!3.31e-08!112;CL:0000136!1.32e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.70e-27;33!CL:0002057;6.70e-27;33!CL:0000473;4.78e-20;39!CL:0000234;4.78e-20;39!CL:0000136;3.36e-19;13!CL:0000576;3.14e-18;48!CL:0000766;4.55e-16;69!CL:0002393;1.68e-08;6!CL:0002397;1.68e-08;6!CL:0002615;4.87e-08;3!CL:0002580;8.44e-08;3!CL:0002087;2.42e-07;104!CL:0002579;5.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.13e-35,42;CL:0002057,2.13e-35,42;CL:0000473,3.92e-32,48;CL:0000234,3.92e-32,48;CL:0000557,1.41e-31,67;CL:0002009,1.07e-28,61;CL:0000839,5.39e-28,66;CL:0000766,1.27e-26,72;CL:0002194,1.01e-25,59;CL:0000576,1.01e-25,59;CL:0000040,1.01e-25,59;CL:0000559,1.01e-25,59;CL:0002031,1.43e-22,120;CL:0000738,9.44e-21,136;CL:0000136,1.02e-19,15;CL:0002087,3.18e-17,115;CL:0000763,5.25e-17,108;CL:0000049,5.25e-17,108;CL:0002032,9.09e-15,161;CL:0000837,9.09e-15,161;CL:0000037,1.66e-14,168;CL:0000988,3.90e-14,177;CL:0000134,9.43e-13,354;CL:0002320,3.55e-12,361;CL:0000219,2.12e-11,386;CL:0000048,8.67e-10,427;CL:0000034,1.86e-09,441;CL:0000723,2.06e-09,433;CL:0002615,4.43e-08,3;CL:0002580,7.68e-08,3;CL:0002393,1.28e-07,9;CL:0002397,1.28e-07,9;CL:0002579,6.20e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.46e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-14!80;UBERON:0002405!1.23e-13!115;UBERON:0001474!1.43e-13!86;UBERON:0002193!1.73e-13!112;UBERON:0002390!1.38e-12!102;UBERON:0003061!1.38e-12!102;UBERON:0004765!3.72e-11!101;UBERON:0001434!3.72e-11!101;UBERON:0002384!5.77e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.64e-13;6!UBERON:0002358;2.64e-13;6!UBERON:0003684;2.64e-13;6!UBERON:0001178;2.64e-13;6!UBERON:0004457;1.37e-08;9!UBERON:0000042;1.37e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.57e-28,76;UBERON:0001474,3.07e-27,82;UBERON:0002405,1.22e-25,93;UBERON:0004765,6.92e-24,90;UBERON:0002390,1.00e-22,98;UBERON:0003061,1.00e-22,98;UBERON:0002193,4.64e-22,108;UBERON:0001434,1.85e-20,100;UBERON:0003688,2.51e-13,6;UBERON:0002358,2.51e-13,6;UBERON:0003684,2.51e-13,6;UBERON:0001178,2.51e-13,6;UBERON:0002384,1.37e-12,371;UBERON:0003081,4.48e-10,203;UBERON:0002204,9.37e-10,167;UBERON:0000926,3.39e-07,315;UBERON:0004120,3.39e-07,315;UBERON:0006603,3.39e-07,315 | |||
|phase1_expression=3.27021082687002,1.71280419112787,3.24195129420734,4.00293193412522,2.68176656656373,0,15.1979926900986,0,1.82829939739887,1.96587149201207,2.09340350391728,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0.251085279189606,0.0764134057479513,0.246301768349837,0.157421562627358,0.786728553697808,1.53531759238885,0.464448369948228,0,0.30120591877825,0,0.309868802321207,0.142169232487422,0,1.10799081706375,2.80762226458198,1.30206522429511,0.447830948479849,0,0.257575567634187,0.145398238779565,0.755751887377619,0.242584061187816,0.929716147622738,2.05583944010913,4.33588919253145,2.58923153089935,3.58624989140741,5.91205574721463,5.5159308917859,4.51839278508678,10.8341189275473,1.69418105588344,0.818718450173537,1.79778787556068,3.97909060082173,5.1348644332175,6.39337125799041,0.989553900560148,2.99195486432448,0.852449501065388,1.7412554317715,2.26954089876456,3.11411124497787,2.26123798731069,3.65038042894141,1.73751075764093,1.21079900526674,0.736555271975129,4.1140110367315,1.26753171787165,0.850417199860174,1.46761051855863,0.898629049171961,0.750884464207532,0.64290234678832,1.42506371870624,0.59675003159727,0.547992461293902,0,0,0,0,0,0,0,0,0,1.76171156811282,0.382273228125229,1.32171328579026,0.560508562981536,0,0.393419540227666,1.17903228824749,1.64481199199607,0,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0.812411591295047,0,0,0.328875809207352,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0.506039384039006,0,0,0,0,0,1.24930726552346,0.473554504088034,0,1.41124720257313,2.67440195783507,0.579297615531196,0,0,0.511450247374121,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0.0945348171640679,0,0.351339142772504,0.130979075497713,0,0,0,0.174129737299267,0.26591592103773,0.953962497221368,1.14398982156026,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,1.06729878806013,1.00416183829401,0,2.28081631715554,0.732186172644509,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0,0,0,1.06748995729705,1.48000529050296,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0.204154171254893,0,0.723280468230358,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0,0.919463387397059,0,0.340296549480063,0,0,0.211931901159562,0.300091096084402,0,0,0.37223371266318,0,0.292311015483596,0.252433774244115,0.184099797284599,0,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0.643240938192885,0,1.85747171212792,1.44375896333917,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,1.18157981336281,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,1.52631302506568,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0.492663237895943,0,6.21984346622316,2.30591925467138,3.66103056936502,0,1.52795370223311,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,1.2162378064119,0,0,0.718874566474748,0,0,2.31650090668127,0.61642896765115,0.895304816199478,2.91421374383171,0.197030760201927,0.862510299438069,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0.24538298343828,0,0,0.207970861530807,0.713715955188647,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0.620304078368662,0.215714200818617,0.853820462427555,0.606255142892519,0,0,3.2254015016441,2.30192959932094,2.80660094433074,2.05022638809122,1.53512174720011,1.44768529029247,0,0,0.355123450626254,0,0,0.348631135379878,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.316654886678627,0,0.340187410553031,0.863663664408557,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,1.64007322849853,2.60302715731442,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0.869932992075073,0,0.858749320451947,0.372158369359667,0.316379424718726,0.190630193923825,0,0.855877976067841,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.392996164052485,0.35667105148125,0,0,0.329294892959902,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,0.376575203107117,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0.557409525377156,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0.333698283423817,0,0,0,0,0.33307196799782,0,0,0.439524537815682,0,0.557216921387392,0.284136146806413,0.95497793895076,0.296964680832639,0,0,0.281338832821026,0.556543525114529,0.494411622680279,0,0.796991953004279,0.828851746593443,0,0.306806047506464,1.84627208191604,2.17727711363265,0.44934175573663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| |||
|short_description=p3@GADD45B | |||
}} |
Latest revision as of 01:27, 17 September 2015
Short description: | p3@GADD45B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GADD45B_5end |
Coexpression cluster: | NA |
Association with transcript: | 241bp_to_AK129595_5end |
EntrezGene: | GADD45B |
HGNC: | 4096 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.57e-28 | 76 |
bone element | 3.07e-27 | 82 |
immune system | 1.22e-25 | 93 |
skeletal element | 6.92e-24 | 90 |
hematopoietic system | 1.00e-22 | 98 |
blood island | 1.00e-22 | 98 |
hemolymphoid system | 4.64e-22 | 108 |
skeletal system | 1.85e-20 | 100 |
omentum | 2.51e-13 | 6 |
peritoneum | 2.51e-13 | 6 |
abdominal cavity | 2.51e-13 | 6 |
visceral peritoneum | 2.51e-13 | 6 |
connective tissue | 1.37e-12 | 371 |
lateral plate mesoderm | 4.48e-10 | 203 |
musculoskeletal system | 9.37e-10 | 167 |
mesoderm | 3.39e-07 | 315 |
mesoderm-derived structure | 3.39e-07 | 315 |
presumptive mesoderm | 3.39e-07 | 315 |