FFCP PHASE1:Hg19::chr19:19496539..19496576,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29989 | |||
|TSSclassifier=strong | |||
|UniProt=C9JJK9 | |||
|association_with_transcript=-62bp_to_ENST00000417582_5end | |||
|cluster_id=chr19:19496539..19496576,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_8_at_GATAD2A_5end | |||
|id=chr19:19496539..19496576,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.91e-25!112;CL:0000049!2.91e-25!112;CL:0002057!1.99e-22!42;CL:0000766!6.27e-21!76;CL:0000860!1.44e-20!45;CL:0000037!6.41e-20!172;CL:0000566!6.41e-20!172;CL:0002032!8.48e-19!165;CL:0000837!8.48e-19!165;CL:0000988!1.98e-18!182;CL:0000557!5.89e-18!71;CL:0002009!4.75e-17!65;CL:0000839!2.22e-16!70;CL:0002194!4.33e-16!63;CL:0000576!4.33e-16!63;CL:0000040!4.33e-16!63;CL:0000559!4.33e-16!63;CL:0000738!3.50e-15!140;CL:0002031!2.55e-11!124;CL:0002087!4.88e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.99e-26;33!CL:0002057;2.99e-26;33!CL:0000473;1.39e-18;39!CL:0000234;1.39e-18;39!CL:0000576;1.60e-16;48!CL:0000766;2.56e-13;69!CL:0000763;7.55e-11;100!CL:0000094;6.16e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.83e-32,108;CL:0000049,4.83e-32,108;CL:0000860,7.38e-29,42;CL:0002057,7.38e-29,42;CL:0000766,5.10e-28,72;CL:0000037,3.73e-25,168;CL:0000473,9.99e-25,48;CL:0000234,9.99e-25,48;CL:0000557,5.51e-24,67;CL:0002032,2.51e-23,161;CL:0000837,2.51e-23,161;CL:0002009,2.66e-23,61;CL:0000988,6.56e-23,177;CL:0002194,5.40e-22,59;CL:0000576,5.40e-22,59;CL:0000040,5.40e-22,59;CL:0000559,5.40e-22,59;CL:0000839,8.59e-21,66;CL:0000738,1.71e-19,136;CL:0002087,2.24e-14,115;CL:0002031,4.32e-14,120;CL:0000094,7.21e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-21;42!CL:0000049;4.94e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.03e-21!102;UBERON:0003061!6.03e-21!102;UBERON:0002193!1.96e-17!112;UBERON:0002371!2.66e-15!80;UBERON:0001474!1.75e-13!86;UBERON:0002405!7.87e-11!115;UBERON:0003081!2.85e-10!216;UBERON:0004765!2.92e-10!101;UBERON:0001434!2.92e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.09e-29,98;UBERON:0003061,7.09e-29,98;UBERON:0002193,1.09e-24,108;UBERON:0002371,2.53e-22,76;UBERON:0002405,1.46e-19,93;UBERON:0001474,5.89e-19,82;UBERON:0004765,5.85e-16,90;UBERON:0001434,3.23e-13,100;UBERON:0003081,1.27e-09,203 | |||
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| |||
|short_description=p8@GATAD2A | |||
}} |
Latest revision as of 19:48, 16 September 2015
Short description: | p8@GATAD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GATAD2A_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -62bp_to_ENST00000417582_5end |
EntrezGene: | GATAD2A |
HGNC: | 29989 |
UniProt: | C9JJK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.83e-32 | 108 |
common myeloid progenitor | 4.83e-32 | 108 |
classical monocyte | 7.38e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.38e-29 | 42 |
myeloid leukocyte | 5.10e-28 | 72 |
hematopoietic stem cell | 3.73e-25 | 168 |
defensive cell | 9.99e-25 | 48 |
phagocyte | 9.99e-25 | 48 |
granulocyte monocyte progenitor cell | 5.51e-24 | 67 |
hematopoietic oligopotent progenitor cell | 2.51e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.51e-23 | 161 |
macrophage dendritic cell progenitor | 2.66e-23 | 61 |
hematopoietic cell | 6.56e-23 | 177 |
monopoietic cell | 5.40e-22 | 59 |
monocyte | 5.40e-22 | 59 |
monoblast | 5.40e-22 | 59 |
promonocyte | 5.40e-22 | 59 |
myeloid lineage restricted progenitor cell | 8.59e-21 | 66 |
leukocyte | 1.71e-19 | 136 |
nongranular leukocyte | 2.24e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 4.32e-14 | 120 |
granulocyte | 7.21e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.09e-29 | 98 |
blood island | 7.09e-29 | 98 |
hemolymphoid system | 1.09e-24 | 108 |
bone marrow | 2.53e-22 | 76 |
immune system | 1.46e-19 | 93 |
bone element | 5.89e-19 | 82 |
skeletal element | 5.85e-16 | 90 |
skeletal system | 3.23e-13 | 100 |
lateral plate mesoderm | 1.27e-09 | 203 |