FFCP PHASE1:Hg19::chr19:14693888..14693955,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34520 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZS10,F8W1T8 | |||
|association_with_transcript=0bp_to_ENST00000339847,ENST00000397439,ENST00000417570,ENST00000547437,ENST00000551730,NM_001204118,NM_207390,uc002mzh.1,uc010dzn.1,uc010dzo.1,uc010xnt.1,uc010xnu.1_5end | |||
|cluster_id=chr19:14693888..14693955,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_CLEC17A_5end | |||
|id=chr19:14693888..14693955,+ | |||
|ontology_enrichment_celltype=CL:0002087!4.84e-44!119;CL:0002057!2.06e-38!42;CL:0000738!4.57e-38!140;CL:0002031!2.41e-35!124;CL:0000860!8.17e-35!45;CL:0000037!1.19e-26!172;CL:0000566!1.19e-26!172;CL:0002032!9.17e-26!165;CL:0000837!9.17e-26!165;CL:0000945!4.93e-25!24;CL:0000826!4.93e-25!24;CL:0002194!1.06e-24!63;CL:0000576!1.06e-24!63;CL:0000040!1.06e-24!63;CL:0000559!1.06e-24!63;CL:0000988!1.06e-23!182;CL:0002009!1.76e-23!65;CL:0000766!1.54e-22!76;CL:0000839!9.48e-21!70;CL:0000557!2.98e-20!71;CL:0000236!3.80e-16!14;CL:0000542!6.30e-16!53;CL:0000051!6.30e-16!53;CL:0000838!5.07e-15!52;CL:0000763!3.64e-11!112;CL:0000049!3.64e-11!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-42;33!CL:0002057;1.44e-42;33!CL:0000945;4.60e-37;24!CL:0000473;5.14e-29;39!CL:0000234;5.14e-29;39!CL:0000576;2.76e-23;48!CL:0000236;9.72e-22;13!CL:0002087;9.01e-17;104!CL:0000766;9.42e-13;69!CL:0000542;6.37e-11;53!CL:0000738;1.73e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.81e-49,115;CL:0000860,2.38e-44,42;CL:0002057,2.38e-44,42;CL:0000738,4.34e-43,136;CL:0002031,3.60e-39,120;CL:0000473,2.27e-37,48;CL:0000234,2.27e-37,48;CL:0000945,4.87e-37,24;CL:0000826,4.87e-37,24;CL:0000037,3.66e-31,168;CL:0002032,1.85e-29,161;CL:0000837,1.85e-29,161;CL:0000988,1.34e-28,177;CL:0002194,1.18e-27,59;CL:0000576,1.18e-27,59;CL:0000040,1.18e-27,59;CL:0000559,1.18e-27,59;CL:0002009,2.08e-26,61;CL:0000766,3.13e-25,72;CL:0000839,1.26e-23,66;CL:0000236,1.61e-23,14;CL:0000557,4.04e-23,67;CL:0000542,4.98e-17,53;CL:0000051,4.98e-17,53;CL:0000838,7.75e-16,52;CL:0000763,3.09e-13,108;CL:0000049,3.09e-13,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.38e-32;42!CL:0000051;6.37e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-37!115;UBERON:0002390!9.99e-28!102;UBERON:0003061!9.99e-28!102;UBERON:0002193!6.75e-26!112;UBERON:0001049!2.95e-19!57;UBERON:0005068!2.95e-19!57;UBERON:0006241!2.95e-19!57;UBERON:0007135!2.95e-19!57;UBERON:0002371!2.27e-16!80;UBERON:0002616!6.77e-15!59;UBERON:0002780!8.10e-15!41;UBERON:0001890!8.10e-15!41;UBERON:0006240!8.10e-15!41;UBERON:0001474!2.86e-14!86;UBERON:0003080!2.94e-14!42;UBERON:0001893!6.74e-14!34;UBERON:0002020!7.92e-14!34;UBERON:0003528!7.92e-14!34;UBERON:0002791!2.87e-13!33;UBERON:0002405!3.52e-13!115;UBERON:0000955!1.50e-12!69;UBERON:0006238!1.50e-12!69;UBERON:0001869!2.13e-12!32;UBERON:0001017!2.34e-12!82;UBERON:0005743!5.67e-12!86;UBERON:0004765!7.97e-11!101;UBERON:0001434!7.97e-11!101;UBERON:0003075!8.81e-11!86;UBERON:0007284!8.81e-11!86;UBERON:0000178!1.28e-10!15;UBERON:0000179!1.28e-10!15;UBERON:0000463!1.28e-10!15;UBERON:0002619!7.68e-10!22;UBERON:0002346!8.51e-10!90;UBERON:0000073!9.99e-10!94;UBERON:0001016!9.99e-10!94;UBERON:0001950!2.68e-08!20;UBERON:0000956!3.72e-08!25;UBERON:0000203!3.72e-08!25;UBERON:0003056!5.32e-08!61;UBERON:0002308!6.46e-08!9;UBERON:0000125!6.46e-08!9;UBERON:0002420!7.13e-08!9;UBERON:0007245!7.13e-08!9;UBERON:0010009!7.13e-08!9;UBERON:0010011!7.13e-08!9;UBERON:0000454!7.13e-08!9;UBERON:0001871!4.91e-07!7;UBERON:0000153!7.90e-07!129;UBERON:0007811!7.90e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-15;15!UBERON:0000179;1.06e-15;15!UBERON:0000463;1.06e-15;15!UBERON:0002390;1.62e-11;32!UBERON:0004177;3.17e-09;5!UBERON:0005057;3.17e-09;5!UBERON:0002193;6.56e-08;42!UBERON:0002106;5.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.87e-36,98;UBERON:0003061,4.87e-36,98;UBERON:0002193,1.35e-34,108;UBERON:0002405,1.44e-22,93;UBERON:0002371,3.54e-19,76;UBERON:0001474,4.82e-17,82;UBERON:0000178,1.11e-15,15;UBERON:0000179,1.11e-15,15;UBERON:0000463,1.11e-15,15;UBERON:0004765,1.17e-14,90;UBERON:0007023,2.02e-13,114;UBERON:0001434,3.06e-12,100;UBERON:0003081,1.26e-10,203;UBERON:0001049,1.54e-07,56;UBERON:0005068,1.54e-07,56;UBERON:0006241,1.54e-07,56;UBERON:0007135,1.54e-07,56;UBERON:0000073,2.89e-07,53;UBERON:0002616,2.89e-07,53;UBERON:0002106,5.63e-07,3;UBERON:0004854,5.63e-07,3;UBERON:0009034,5.63e-07,3;UBERON:0002095,5.63e-07,3;UBERON:0004782,5.63e-07,3;UBERON:0003281,5.63e-07,3;UBERON:0009664,5.63e-07,3;UBERON:0002296,5.63e-07,3;UBERON:0005602,5.63e-07,3;UBERON:0001179,5.63e-07,3;UBERON:0006293,5.63e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.0410597420598,48.5214483649179,49.0368167584222,2.36018566109342,0.383829398097213,2.63187409637329,0,0,0,6.04244164526353,1.56386155736164,0,2.21598163412751,2.20598892217156,0.868043482863407,0.223915474239924,0.32389366601898,0,4.07115068582781,16.6265415223076,10.1885305698883,1.85943229524548,9.04569353648017,7.12324653058738,1.43846196161075,11.2710710872804,4.49316236788312,1.72372840368309,6.45484683583826,2.70852973188684,3.76484679085209,19.1034305040492,9.21366286224847,1.83650335422542,16.6883094079569,3.83602275479425,2.63881040149373,10.3721101963249,10.6556187633174,2.32167390902867,5.6738522469114,4.35975574296902,3.26623264833766,8.34372669472322,5.42972111762792,1.81619850790011,4.05105399586321,1.58231193720442,1.90129757680748,0.425208599930087,1.67726916406701,1.68492946719743,0.750884464207532,1.6072558669708,0.570025487482497,0,0.730656615058536,87.9981222306614,95.574256970873,81.834851355447,105.829095196494,96.895828862715,109.777716031306,106.428224518363,106.854020507961,64.3210655093677,45.8045007709332,51.6068857969059,3.96513985737078,4.48406850385229,0,0,0,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0,0,0,0,0.602300476311091,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0.664789802594326,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47748907103838,4.31428401637234,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,7.10426652925037,5.35246044999663,6.26611905891579,13.8174429765518,18.0999400157925,6.48473311192717,9.72056587028607,7.9312517629427,0,0,0,53.3255112610813,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0.994147647766298,1.26602474769461,0,0,0,0.398495976502139,26.246971975459,0,0,95.3907242323288,0,0,0,0,0.986434056369336,7.18449277040819,0,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.110579259931225,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.265372693510018,6.72133159426988,0,0,0,3.77446344691791,0,0.468528891450678,7.84555593627364,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,1.07628353124994,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.01191833562385,0,0,4.46908502274835,0.279282401272254,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,21.7610463409066,3.97614844904652,1.77064427945048,0.160753148465019,0,0,0,0,1.64023802976667,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.0342636508924,1.58679122091228,0,0,0.427149650270779,0.471612915298998,0.414239055347196,10.419486458051,0,37.2685351045542,0,0,0,0,0,0,0,0.488105059607853,0.500763722825999,0.573409195690071,2.44043913381075,2.67014532647949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34881372702565,0,0.957803154342908,0.205116364240755,0,0.760729777106397,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.810451015420736,0,0.206686796501184,0.824405532520789,0,3.28954660114309,0,0,0,0,2.01770233331294,0,0,0.177404740325278,36.8748760178494,0,1.63127359144396,1.18390992413128,0,0,0.470958557103084,0.157115589916002,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.694567422971502,0.218559560503957,0,0,0,0.588925401344836,5.34683520588755,0.4226557275834,0,17.3870248262729,31.4554493311057,78.753630868844,0,0,0,1.46067277649303,6.42220996766357,1.29005624836306,0,1.63179576458195,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,2.58582489654738,1.27940389140589,0,1.16260037704811,1.86224142887574,0,0,0.202117188958219,0.217716747896961,0,25.6611321985578,0.430333232356058,0,0,0,0,0,0,0,0.406896178315738,0,26.5681407540155,82.7066710142341 | |||
|short_description=p1@CLEC17A | |||
}} |
Latest revision as of 05:41, 16 September 2015
Short description: | p1@CLEC17A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLEC17A_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000339847, ENST00000397439, ENST00000417570, ENST00000547437, ENST00000551730, NM_001204118, NM_207390, uc002mzh.1, uc010dzn.1, uc010dzo.1, uc010xnt.1, uc010xnu.1_5end |
EntrezGene: | CLEC17A |
HGNC: | 34520 |
UniProt: | Q6ZS10F8W1T8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 4.81e-49 | 115 |
classical monocyte | 2.38e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.38e-44 | 42 |
leukocyte | 4.34e-43 | 136 |
hematopoietic lineage restricted progenitor cell | 3.60e-39 | 120 |
defensive cell | 2.27e-37 | 48 |
phagocyte | 2.27e-37 | 48 |
lymphocyte of B lineage | 4.87e-37 | 24 |
pro-B cell | 4.87e-37 | 24 |
hematopoietic stem cell | 3.66e-31 | 168 |
hematopoietic oligopotent progenitor cell | 1.85e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-29 | 161 |
hematopoietic cell | 1.34e-28 | 177 |
monopoietic cell | 1.18e-27 | 59 |
monocyte | 1.18e-27 | 59 |
monoblast | 1.18e-27 | 59 |
promonocyte | 1.18e-27 | 59 |
macrophage dendritic cell progenitor | 2.08e-26 | 61 |
myeloid leukocyte | 3.13e-25 | 72 |
myeloid lineage restricted progenitor cell | 1.26e-23 | 66 |
B cell | 1.61e-23 | 14 |
granulocyte monocyte progenitor cell | 4.04e-23 | 67 |
lymphocyte | 4.98e-17 | 53 |
common lymphoid progenitor | 4.98e-17 | 53 |
lymphoid lineage restricted progenitor cell | 7.75e-16 | 52 |
myeloid cell | 3.09e-13 | 108 |
common myeloid progenitor | 3.09e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.87e-36 | 98 |
blood island | 4.87e-36 | 98 |
hemolymphoid system | 1.35e-34 | 108 |
immune system | 1.44e-22 | 93 |
bone marrow | 3.54e-19 | 76 |
bone element | 4.82e-17 | 82 |
blood | 1.11e-15 | 15 |
haemolymphatic fluid | 1.11e-15 | 15 |
organism substance | 1.11e-15 | 15 |
skeletal element | 1.17e-14 | 90 |
adult organism | 2.02e-13 | 114 |
skeletal system | 3.06e-12 | 100 |
lateral plate mesoderm | 1.26e-10 | 203 |
neural tube | 1.54e-07 | 56 |
neural rod | 1.54e-07 | 56 |
future spinal cord | 1.54e-07 | 56 |
neural keel | 1.54e-07 | 56 |
regional part of nervous system | 2.89e-07 | 53 |
regional part of brain | 2.89e-07 | 53 |
spleen | 5.63e-07 | 3 |
gastrointestinal system mesentery | 5.63e-07 | 3 |
stomach region | 5.63e-07 | 3 |
mesentery | 5.63e-07 | 3 |
gastrointestinal system serosa | 5.63e-07 | 3 |
mesentery of stomach | 5.63e-07 | 3 |
gut mesentery | 5.63e-07 | 3 |
dorsal mesentery | 5.63e-07 | 3 |
dorsal mesogastrium | 5.63e-07 | 3 |
peritoneal cavity | 5.63e-07 | 3 |
spleen primordium | 5.63e-07 | 3 |