FFCP PHASE1:Hg19::chr19:13050317..13050410,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1455 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=60bp_to_AF087986_5end | |||
|cluster_id=chr19:13050317..13050410,+ | |||
|coexpression_cluster_id=C603 | |||
|description=CAGE_peak_2_at_CALR_5end | |||
|id=chr19:13050317..13050410,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.43e-20!625;CL:0000548!1.99e-20!679;CL:0000004!1.99e-20!679;CL:0000255!1.99e-20!679;CL:0002371!5.50e-20!591;CL:0000012!8.32e-20!682;CL:0000055!3.52e-15!180;CL:0000723!1.47e-13!436;CL:0000048!1.91e-13!430;CL:0000034!5.65e-13!444;CL:0000003!1.02e-10!722;CL:0000220!8.19e-10!246;CL:0002321!1.16e-09!248;CL:0000222!2.21e-09!119;CL:0000063!1.08e-08!578;CL:0000183!1.17e-08!59;CL:0000192!1.49e-08!42;CL:0000514!1.49e-08!42;CL:0000680!2.44e-08!57;CL:0000056!2.44e-08!57;CL:0000355!2.44e-08!57;CL:0000393!2.90e-08!60;CL:0000211!2.90e-08!60;CL:0000057!5.46e-08!75;CL:0000187!8.39e-08!54;CL:0000359!2.87e-07!32;CL:0002320!4.17e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.88e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,5.04e-13,433;CL:0000048,6.47e-13,427;CL:0000034,1.89e-12,441;CL:0002321,1.03e-09,250;CL:0000222,2.16e-09,121;CL:0000192,4.31e-08,43;CL:0000514,4.31e-08,43;CL:0000680,5.77e-08,58;CL:0000056,5.77e-08,58;CL:0000355,5.77e-08,58;CL:0000057,5.91e-08,76;CL:0000393,6.63e-08,61;CL:0000211,6.63e-08,61;CL:0000187,1.95e-07,55;CL:0000359,2.87e-07,32;CL:0002320,7.18e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.17e-10!42;UBERON:0003509!8.17e-10!42;UBERON:0004572!8.17e-10!42;UBERON:0005256!9.39e-10!143;UBERON:0000914!6.01e-09!83;UBERON:0002329!6.01e-09!83;UBERON:0003077!6.01e-09!83;UBERON:0003059!6.01e-09!83;UBERON:0007282!6.01e-09!83;UBERON:0009618!6.01e-09!83;UBERON:0007285!6.01e-09!83;UBERON:0003914!8.48e-09!118;UBERON:0004290!1.59e-08!70;UBERON:0000486!2.06e-08!82;UBERON:0002049!2.55e-08!79;UBERON:0007798!2.55e-08!79;UBERON:0001981!3.09e-08!60;UBERON:0007500!3.09e-08!60;UBERON:0004537!3.09e-08!60;UBERON:0006965!3.09e-08!60;UBERON:0000055!3.35e-08!69;UBERON:0004573!1.22e-07!33;UBERON:0004571!1.22e-07!33;UBERON:0001134!2.17e-07!61;UBERON:0002036!2.17e-07!61;UBERON:0003082!2.17e-07!61;UBERON:0004872!2.46e-07!84;UBERON:0000490!2.53e-07!138;UBERON:0002384!6.17e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.04e-07;42!UBERON:0003509;2.04e-07;42!UBERON:0004572;2.04e-07;42!UBERON:0004573;3.49e-07;33!UBERON:0004571;3.49e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.63e-10,78;UBERON:0001637,8.16e-10,42;UBERON:0003509,8.16e-10,42;UBERON:0004572,8.16e-10,42;UBERON:0005256,1.83e-09,122;UBERON:0003914,4.85e-09,117;UBERON:0002049,2.35e-08,78;UBERON:0007798,2.35e-08,78;UBERON:0007500,2.71e-08,59;UBERON:0001981,2.71e-08,59;UBERON:0004537,2.71e-08,59;UBERON:0006965,2.71e-08,59;UBERON:0000055,3.03e-08,68;UBERON:0002329,3.34e-08,71;UBERON:0003059,3.34e-08,71;UBERON:0007282,3.34e-08,71;UBERON:0004290,3.34e-08,71;UBERON:0009618,3.34e-08,71;UBERON:0000490,3.76e-08,148;UBERON:0007524,3.85e-08,73;UBERON:0000486,4.00e-08,83;UBERON:0000926,4.83e-08,315;UBERON:0004120,4.83e-08,315;UBERON:0006603,4.83e-08,315;UBERON:0003077,8.26e-08,72;UBERON:0007285,8.26e-08,72;UBERON:0004573,1.22e-07,33;UBERON:0004571,1.22e-07,33;UBERON:0004872,2.33e-07,83;UBERON:0001134,4.47e-07,62;UBERON:0002036,4.47e-07,62;UBERON:0003082,4.47e-07,62;UBERON:0003104,4.49e-07,160;UBERON:0009142,4.49e-07,160 | |||
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| |||
|short_description=p2@CALR | |||
}} |
Latest revision as of 22:05, 15 September 2015
Short description: | p2@CALR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CALR_5end |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | 60bp_to_AF087986_5end |
EntrezGene: | CALR |
HGNC: | 1455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 5.04e-13 | 433 |
multi fate stem cell | 6.47e-13 | 427 |
stem cell | 1.89e-12 | 441 |
embryonic cell | 1.03e-09 | 250 |
mesodermal cell | 2.16e-09 | 121 |
smooth muscle cell | 4.31e-08 | 43 |
smooth muscle myoblast | 4.31e-08 | 43 |
muscle precursor cell | 5.77e-08 | 58 |
myoblast | 5.77e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.77e-08 | 58 |
fibroblast | 5.91e-08 | 76 |
electrically responsive cell | 6.63e-08 | 61 |
electrically active cell | 6.63e-08 | 61 |
muscle cell | 1.95e-07 | 55 |
vascular associated smooth muscle cell | 2.87e-07 | 32 |
connective tissue cell | 7.18e-07 | 361 |