FFCP PHASE1:Hg19::chr19:10396259..10396273,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3383 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5344 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=99bp_to_M55091_5end | |||
|cluster_id=chr19:10396259..10396273,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_9_at_ICAM1_5end | |||
|id=chr19:10396259..10396273,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.87e-25!42;CL:0000860!1.00e-24!45;CL:0002009!1.66e-24!65;CL:0000766!8.44e-24!76;CL:0002194!3.78e-23!63;CL:0000576!3.78e-23!63;CL:0000040!3.78e-23!63;CL:0000559!3.78e-23!63;CL:0000557!1.35e-22!71;CL:0000839!9.89e-21!70;CL:0000738!3.93e-15!140;CL:0000763!1.62e-13!112;CL:0000049!1.62e-13!112;CL:0002087!4.48e-13!119;CL:0002031!2.66e-12!124;CL:0000988!4.12e-10!182;CL:0000048!6.19e-09!430;CL:0000037!7.49e-09!172;CL:0000566!7.49e-09!172;CL:0002032!1.21e-08!165;CL:0000837!1.21e-08!165;CL:0000723!2.61e-08!436;CL:0000034!6.85e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.83e-57;33!CL:0002057;7.83e-57;33!CL:0000473;1.57e-48;39!CL:0000234;1.57e-48;39!CL:0000576;1.58e-29;48!CL:0000766;4.15e-23;69!CL:0000763;2.57e-12;100!CL:0002087;3.31e-08;104!CL:0000738;5.91e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.43e-61,48;CL:0000234,2.43e-61,48;CL:0000860,1.46e-56,42;CL:0002057,1.46e-56,42;CL:0002194,1.33e-47,59;CL:0000576,1.33e-47,59;CL:0000040,1.33e-47,59;CL:0000559,1.33e-47,59;CL:0000766,1.66e-47,72;CL:0002009,7.90e-46,61;CL:0000839,7.33e-42,66;CL:0000557,3.88e-41,67;CL:0000763,3.46e-29,108;CL:0000049,3.46e-29,108;CL:0000738,1.30e-21,136;CL:0002087,4.11e-21,115;CL:0002031,6.05e-20,120;CL:0000988,3.03e-17,177;CL:0002032,4.47e-17,161;CL:0000837,4.47e-17,161;CL:0000037,4.75e-16,168;CL:0000134,8.81e-08,354;CL:0002320,1.83e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.89e-43;42!CL:0000049;8.04e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.63e-23!112;UBERON:0002405!1.11e-22!115;UBERON:0002390!3.73e-21!102;UBERON:0003061!3.73e-21!102;UBERON:0002371!8.75e-20!80;UBERON:0001474!4.23e-17!86;UBERON:0004765!3.66e-14!101;UBERON:0001434!3.66e-14!101;UBERON:0003081!2.39e-13!216;UBERON:0002204!5.36e-11!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.79e-35,76;UBERON:0001474,2.21e-32,82;UBERON:0002390,4.37e-30,98;UBERON:0003061,4.37e-30,98;UBERON:0004765,6.78e-29,90;UBERON:0002405,9.67e-28,93;UBERON:0002193,1.27e-26,108;UBERON:0001434,2.57e-25,100;UBERON:0003081,4.25e-16,203;UBERON:0002204,1.07e-14,167;UBERON:0000926,7.63e-09,315;UBERON:0004120,7.63e-09,315;UBERON:0006603,7.63e-09,315;UBERON:0002384,4.93e-07,371 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,1.22866968250754,2.79120467188971,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,0.154934401160603,0.284338464974843,0,0,2.20598892217156,1.08505435357926,0.671746422719773,0,0.257575567634187,0.290796477559129,0,0,2.09186133215116,0.411167888021826,1.54853185447552,6.90461741573161,4.09857130446561,8.27687804610048,2.41321976515633,1.29096936716765,2.70852973188684,2.63539275359647,1.09162460023138,1.12361742222542,4.59125838556354,2.56743221660875,2.55734850319616,0.659702600373432,1.19678194572979,0.852449501065388,4.64334781805734,2.26954089876456,4.9825779919646,2.51248665256743,3.12889751052121,4.77815458351257,1.81619850790011,1.10483290796269,4.74693581161327,0.633765858935825,0.212604299965044,0,0.336985893439485,0.150176892841506,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0.639312809217652,0,0.50133791063589,0,0.795285947051099,1.94653948121054,0,0.221729397462564,0.175669571386252,0,0,0,0,0.174129737299267,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0.436094052142534,0.496971951695318,0,0.264818361626438,0,0,0,0,0.49333509683432,0.622422070799533,0.67355336034844,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866198686566443,0.462985512576611,0.380508304469197,0,0,0,0,0.445893486866185,0,0,0.283550194484773,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0.87192013766656,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0.602878754119172,0,0.699810938274399,2.43247561282381,1.00451418286425,4.21667878966063,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0.637938751653163,5.99205619157746,26.9245313283622,0.828831026872071,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0.160853921143607,0,0.462629081407967,0.177561725313127,0,0,0,0.241718899183244,0.200506470303285,0,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,2.49322802678617,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.661139661443912,0.384380134730212,0.127612712494584,0.2023155617111,0,0.62962469366128,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0.38126038784765,0.255897791311334,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0.48763373908959,1.70599442741899,0,0,0,0,0,0,0.876901770507525,0.578775534266688,0,0.202910376962704,0,0,0,0.196498082026242,0,0,0.633322905892992,0.329294892959902,0,0,0,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,2.39278317278703,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0.225595660617181,0,0,0,0,2.10998064528027,0.489698424477443,0,0,0,0.0884575645033392,0,1.18608451472249,1.11207545051853,0.835375596043643,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15361907373044,0,0,0.669514372325618,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0.275078873194468,0,0.449947783103001,0.77380195455795,0,0,0,0.104909176269996,0.211200673038813,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.58620893471233,0,0,0,0,0,0.427149650270779,0.471612915298998,2.48543433208317,0.496166021811951,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.303298235083296,0,1.88212655758537,0,0,0,0,0,0.189403005275089,0,0,0.457680136793847,0,0,0.147855149989634,0.159296767163702,0.899606224327209,0.621051827505038,0,1.86089200190596,2.08698024724694,0.751288044986092,1.90402606084398,0.406870733204662,0,0.322231671127465,0,1.19428766609585,0,0,0,0,0.192619830407303,1.07220795687463,0,0.226705925512272,0,0.489473409012935,0,0.308801447160972,0.219284049578707,0.176689145945881,0.38582807654183,0.337884881306145,0,0,0,0,0.194860308839388,0.398594520940089,0,0.982829546539238,0,0,0.39997479170986,0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| |||
|short_description=p9@ICAM1 | |||
}} |
Latest revision as of 00:32, 25 September 2015
Short description: | p9@ICAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ICAM1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 99bp_to_M55091_5end |
EntrezGene: | ICAM1 |
HGNC: | 5344 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.43e-61 | 48 |
phagocyte | 2.43e-61 | 48 |
classical monocyte | 1.46e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-56 | 42 |
monopoietic cell | 1.33e-47 | 59 |
monocyte | 1.33e-47 | 59 |
monoblast | 1.33e-47 | 59 |
promonocyte | 1.33e-47 | 59 |
myeloid leukocyte | 1.66e-47 | 72 |
macrophage dendritic cell progenitor | 7.90e-46 | 61 |
myeloid lineage restricted progenitor cell | 7.33e-42 | 66 |
granulocyte monocyte progenitor cell | 3.88e-41 | 67 |
myeloid cell | 3.46e-29 | 108 |
common myeloid progenitor | 3.46e-29 | 108 |
leukocyte | 1.30e-21 | 136 |
nongranular leukocyte | 4.11e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 6.05e-20 | 120 |
hematopoietic cell | 3.03e-17 | 177 |
hematopoietic oligopotent progenitor cell | 4.47e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.47e-17 | 161 |
hematopoietic stem cell | 4.75e-16 | 168 |
mesenchymal cell | 8.81e-08 | 354 |
connective tissue cell | 1.83e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.79e-35 | 76 |
bone element | 2.21e-32 | 82 |
hematopoietic system | 4.37e-30 | 98 |
blood island | 4.37e-30 | 98 |
skeletal element | 6.78e-29 | 90 |
immune system | 9.67e-28 | 93 |
hemolymphoid system | 1.27e-26 | 108 |
skeletal system | 2.57e-25 | 100 |
lateral plate mesoderm | 4.25e-16 | 203 |
musculoskeletal system | 1.07e-14 | 167 |
mesoderm | 7.63e-09 | 315 |
mesoderm-derived structure | 7.63e-09 | 315 |
presumptive mesoderm | 7.63e-09 | 315 |
connective tissue | 4.93e-07 | 371 |