FFCP PHASE1:Hg19::chr18:59854480..59854551,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57614 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29289 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P260,Q96ES0 | |||
|association_with_transcript=0bp_to_ENST00000256858,ENST00000398130,NM_020854,uc002lik.1,uc002lil.2,uc010xel.1_5end | |||
|cluster_id=chr18:59854480..59854551,+ | |||
|coexpression_cluster_id=C972 | |||
|description=CAGE_peak_1_at_KIAA1468_5end | |||
|id=chr18:59854480..59854551,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.72e-35!140;CL:0000037!1.35e-32!172;CL:0000566!1.35e-32!172;CL:0002032!2.70e-29!165;CL:0000837!2.70e-29!165;CL:0000988!8.15e-29!182;CL:0002031!5.03e-27!124;CL:0002087!6.92e-26!119;CL:0000766!4.37e-18!76;CL:0000763!2.96e-17!112;CL:0000049!2.96e-17!112;CL:0000557!3.39e-16!71;CL:0000839!3.09e-15!70;CL:0002057!4.90e-14!42;CL:0002009!5.08e-14!65;CL:0000860!2.17e-13!45;CL:0002194!3.21e-13!63;CL:0000576!3.21e-13!63;CL:0000040!3.21e-13!63;CL:0000559!3.21e-13!63;CL:0000542!1.78e-11!53;CL:0000051!1.78e-11!53;CL:0000838!5.55e-11!52;CL:0000791!2.24e-09!18;CL:0000789!2.24e-09!18;CL:0002420!2.24e-09!18;CL:0002419!2.24e-09!18;CL:0000790!2.24e-09!18;CL:0000625!2.36e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.27e-09;48!CL:0000860;1.98e-09;33!CL:0002057;1.98e-09;33!CL:0000791;2.08e-09;18!CL:0000789;2.08e-09;18!CL:0002419;2.08e-09;18!CL:0002087;5.41e-09;104!CL:0000766;2.71e-08;69!CL:0000738;8.79e-08;136!CL:0000473;9.80e-08;39!CL:0000234;9.80e-08;39!CL:0000625;2.26e-07;11!CL:0000542;4.01e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.42e-36,136;CL:0000037,3.21e-33,168;CL:0000988,4.48e-30,177;CL:0002032,6.94e-30,161;CL:0000837,6.94e-30,161;CL:0002031,8.54e-28,120;CL:0002087,1.17e-26,115;CL:0000766,5.73e-19,72;CL:0000763,8.40e-18,108;CL:0000049,8.40e-18,108;CL:0000557,4.83e-17,67;CL:0000839,4.85e-16,66;CL:0002009,8.09e-15,61;CL:0000860,4.90e-14,42;CL:0002057,4.90e-14,42;CL:0002194,5.39e-14,59;CL:0000576,5.39e-14,59;CL:0000040,5.39e-14,59;CL:0000559,5.39e-14,59;CL:0000473,2.32e-13,48;CL:0000234,2.32e-13,48;CL:0000542,1.78e-11,53;CL:0000051,1.78e-11,53;CL:0000838,5.55e-11,52;CL:0000791,2.24e-09,18;CL:0000789,2.24e-09,18;CL:0002420,2.24e-09,18;CL:0002419,2.24e-09,18;CL:0000790,2.24e-09,18;CL:0000625,2.36e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-10;42!CL:0000790;2.08e-09;18!CL:0000051;4.01e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.17e-26!115;UBERON:0002390!1.34e-17!102;UBERON:0003061!1.34e-17!102;UBERON:0002780!4.51e-17!41;UBERON:0001890!4.51e-17!41;UBERON:0006240!4.51e-17!41;UBERON:0001049!4.85e-17!57;UBERON:0005068!4.85e-17!57;UBERON:0006241!4.85e-17!57;UBERON:0007135!4.85e-17!57;UBERON:0003080!9.74e-17!42;UBERON:0002193!4.53e-15!112;UBERON:0002616!4.74e-15!59;UBERON:0001017!3.48e-14!82;UBERON:0001893!6.07e-14!34;UBERON:0001869!1.66e-13!32;UBERON:0002020!1.82e-13!34;UBERON:0003528!1.82e-13!34;UBERON:0002791!2.36e-13!33;UBERON:0005743!5.13e-13!86;UBERON:0000955!5.88e-13!69;UBERON:0006238!5.88e-13!69;UBERON:0002371!1.42e-12!80;UBERON:0000073!1.48e-12!94;UBERON:0001016!1.48e-12!94;UBERON:0001474!1.00e-11!86;UBERON:0002619!3.76e-11!22;UBERON:0001950!1.57e-10!20;UBERON:0000956!5.29e-10!25;UBERON:0000203!5.29e-10!25;UBERON:0004765!6.50e-10!101;UBERON:0001434!6.50e-10!101;UBERON:0003075!1.15e-08!86;UBERON:0007284!1.15e-08!86;UBERON:0002346!3.34e-08!90;UBERON:0002405!5.21e-08!115;UBERON:0003056!7.83e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.53e-12;41!UBERON:0001890;1.53e-12;41!UBERON:0001869;3.05e-12;32!UBERON:0001893;3.89e-12;34!UBERON:0002791;5.30e-12;32!UBERON:0003528;9.24e-12;34!UBERON:0002020;9.24e-12;34!UBERON:0002619;3.86e-11;22!UBERON:0001950;1.62e-10;20!UBERON:0000073;3.15e-10;53!UBERON:0002616;3.15e-10;53!UBERON:0000956;5.08e-10;25!UBERON:0000203;5.08e-10;25!UBERON:0007023;4.41e-08;114!UBERON:0000955;7.06e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-25,114;UBERON:0002390,3.22e-18,98;UBERON:0003061,3.22e-18,98;UBERON:0001049,2.75e-17,56;UBERON:0005068,2.75e-17,56;UBERON:0006241,2.75e-17,56;UBERON:0007135,2.75e-17,56;UBERON:0002780,4.51e-17,41;UBERON:0001890,4.51e-17,41;UBERON:0003080,4.51e-17,41;UBERON:0006240,4.51e-17,41;UBERON:0000073,7.04e-17,53;UBERON:0002616,7.04e-17,53;UBERON:0002193,1.52e-15,108;UBERON:0001017,2.57e-14,81;UBERON:0001893,6.07e-14,34;UBERON:0001016,1.01e-13,89;UBERON:0001869,1.66e-13,32;UBERON:0003528,1.82e-13,34;UBERON:0002020,1.82e-13,34;UBERON:0002371,3.85e-13,76;UBERON:0002791,4.04e-13,32;UBERON:0000955,4.22e-13,68;UBERON:0006238,4.22e-13,68;UBERON:0001474,3.28e-12,82;UBERON:0002405,7.09e-12,93;UBERON:0002619,3.76e-11,22;UBERON:0001950,1.57e-10,20;UBERON:0000956,5.29e-10,25;UBERON:0000203,5.29e-10,25;UBERON:0004765,7.18e-10,90;UBERON:0001434,2.45e-09,100;UBERON:0003075,5.52e-09,82;UBERON:0007284,5.52e-09,82;UBERON:0002346,1.74e-08,86;UBERON:0003056,2.63e-08,61 | |||
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| |||
|short_description=p1@KIAA1468 | |||
}} |
Latest revision as of 02:32, 20 September 2015
Short description: | p1@KIAA1468 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA1468_5end |
Coexpression cluster: | C972_granulocyte_CD4_CD19_Neutrophils_acute_CD8_Eosinophils |
Association with transcript: | 0bp_to_ENST00000256858, ENST00000398130, NM_020854, uc002lik.1, uc002lil.2, uc010xel.1_5end |
EntrezGene: | KIAA1468 |
HGNC: | 29289 |
UniProt: | Q9P260Q96ES0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-25 | 114 |
hematopoietic system | 3.22e-18 | 98 |
blood island | 3.22e-18 | 98 |
neural tube | 2.75e-17 | 56 |
neural rod | 2.75e-17 | 56 |
future spinal cord | 2.75e-17 | 56 |
neural keel | 2.75e-17 | 56 |
regional part of forebrain | 4.51e-17 | 41 |
forebrain | 4.51e-17 | 41 |
anterior neural tube | 4.51e-17 | 41 |
future forebrain | 4.51e-17 | 41 |
regional part of nervous system | 7.04e-17 | 53 |
regional part of brain | 7.04e-17 | 53 |
hemolymphoid system | 1.52e-15 | 108 |
central nervous system | 2.57e-14 | 81 |
telencephalon | 6.07e-14 | 34 |
nervous system | 1.01e-13 | 89 |
cerebral hemisphere | 1.66e-13 | 32 |
brain grey matter | 1.82e-13 | 34 |
gray matter | 1.82e-13 | 34 |
bone marrow | 3.85e-13 | 76 |
regional part of telencephalon | 4.04e-13 | 32 |
brain | 4.22e-13 | 68 |
future brain | 4.22e-13 | 68 |
bone element | 3.28e-12 | 82 |
immune system | 7.09e-12 | 93 |
regional part of cerebral cortex | 3.76e-11 | 22 |
neocortex | 1.57e-10 | 20 |
cerebral cortex | 5.29e-10 | 25 |
pallium | 5.29e-10 | 25 |
skeletal element | 7.18e-10 | 90 |
skeletal system | 2.45e-09 | 100 |
neural plate | 5.52e-09 | 82 |
presumptive neural plate | 5.52e-09 | 82 |
neurectoderm | 1.74e-08 | 86 |
pre-chordal neural plate | 2.63e-08 | 61 |